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qs_4_scaffold_373

Search features with annotation key words

Displaying 25 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_4_scaffold_373_1
unknown

Not on your lists

comp(278..994)
DNA (717bp) protein (239aa)

This feature has no annotations

qs_4_scaffold_373_2
unknown

Not on your lists

comp(998..1381)
DNA (384bp) protein (128aa)

This feature has no annotations

qs_4_scaffold_373_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(1652..2311)
DNA (660bp) protein (220aa)
Metallo-beta-lactamase family protein n=2 Tax=Salinibacter ruber RepID=D5HB20_SALRM
metallo-beta-lactamase family protein
Metallo-beta-lactamase family protein {ECO:0000313|EMBL:CBH25225.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sal
qs_4_scaffold_373_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

2350..4047
DNA (1698bp) protein (566aa)
Uncharacterized protein n=2 Tax=Salinibacter ruber RepID=D5HB21_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH25226.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_4_scaffold_373_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

4100..4771
DNA (672bp) protein (224aa)
methyltransferase; K07056 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] id=24658025 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule
tetrapyrrole methylase family protein
qs_4_scaffold_373_6
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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4984..5496
DNA (513bp) protein (171aa)
BLUF domain protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PAY1_9BACT
bLUF domain protein
BLUF domain protein {ECO:0000313|EMBL:CBK40390.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
qs_4_scaffold_373_7
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

5560..8643
DNA (3084bp) protein (1028aa)
Uncharacterized protein n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SEH7_RHOMR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN72169.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus mari
qs_4_scaffold_373_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

8814..9236
DNA (423bp) protein (141aa)
Conserved domain protein n=2 Tax=Salinibacter ruber RepID=Q2S0T4_SALRD
cspD; cold-shock protein
Conserved domain protein {ECO:0000313|EMBL:ABC44050.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rub
qs_4_scaffold_373_9
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

9299..9754
DNA (456bp) protein (152aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023089}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023108};; TaxID=762570 species="Bacteria; Ba
Endoribonuclease YbeY n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SEH6_RHOMR
metalloprotease ybeY
qs_4_scaffold_373_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

9910..10230
DNA (321bp) protein (107aa)
ribose phosphate pyrophosphokinase n=1 Tax=Salisaeta longa RepID=UPI0003B30B61
yfiA; ribosomal subunit interface protein
Ribosomal subunit interface protein {ECO:0000313|EMBL:ABC44215.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salin
qs_4_scaffold_373_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(10609..11565)
DNA (957bp) protein (319aa)
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis
Methylenetetrahydrofolate reductase n=2 Tax=Salinibacter ruber RepID=D5HB29_SALRM
metF; 5,10-methylenetetrahydrofolate reductase
qs_4_scaffold_373_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(11666..11959)
DNA (294bp) protein (98aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B64649
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH25236.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_4_scaffold_373_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(12135..12671)
DNA (537bp) protein (179aa)
oxidase n=1 Tax=Salisaeta longa RepID=UPI0003B5D369
ctaF; cytochrome oxidase subunit IV
Caa(3)-type oxidase, subunit IV subfamily, putative {ECO:0000313|EMBL:ABC44967.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.
qs_4_scaffold_373_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(12753..13502)
DNA (750bp) protein (250aa)
Cytochrome c oxidase subunit 3 {ECO:0000313|EMBL:CBH25238.1}; EC=1.9.3.1 {ECO:0000313|EMBL:CBH25238.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothe
cytochrome oxidase subunit III n=1 Tax=Salisaeta longa RepID=UPI0003B48837
ctaE; cytochrome c oxidase subunit 3
qs_4_scaffold_373_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(13612..15417)
DNA (1806bp) protein (602aa)
Cytochrome oxidase subunit I {ECO:0000313|EMBL:ABC44742.1}; EC=1.9.3.1 {ECO:0000313|EMBL:ABC44742.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodotherm
cytochrome C oxidase subunit I n=1 Tax=Salisaeta longa RepID=UPI0003B423FA
ctaD; cytochrome c oxidase subunit I
qs_4_scaffold_373_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(15711..16700)
DNA (990bp) protein (330aa)
Cytochrome c oxidase subunit 2; EC=1.9.3.1 {ECO:0000313|EMBL:CBH25240.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" sourc
cytochrome C oxidase subunit II n=1 Tax=Salisaeta longa RepID=UPI0003B35A53
ctaC; cytochrome c oxidase subunit II
qs_4_scaffold_373_17
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(16769..17731)
DNA (963bp) protein (321aa)
Electron transport protein SCO1/SenC n=2 Tax=Rhodothermus marinus RepID=D0MDE1_RHOM4
electron transport protein SCO1/SenC
Electron transport protein SCO1/SenC {ECO:0000313|EMBL:ACY47134.1}; Flags: Precursor;; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodother
qs_4_scaffold_373_18
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(17873..18841)
DNA (969bp) protein (323aa)
hypothetical protein
hypothetical protein id=24658038 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH25241.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_4_scaffold_373_19
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(19048..20334)
DNA (1287bp) protein (429aa)
membrane protein n=1 Tax=Salisaeta longa RepID=UPI0003B4626E
molybdopterin oxidoreductase, membrane subunit
Probable molybdopterin oxidoreductase, membrane subunit {ECO:0000313|EMBL:CBH25242.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibac
qs_4_scaffold_373_20
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(20386..21528)
DNA (1143bp) protein (381aa)
quinol:cytochrome C oxidoreductase n=1 Tax=Salisaeta longa RepID=UPI0003B6FAA8
quinol:cytochrome c oxidoreductase monoheme cytochrome subunit
Quinol:cytochrome c oxidoreductase monoheme cytochrome subunit {ECO:0000313|EMBL:ACY47131.1}; Flags: Precursor;; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis;
qs_4_scaffold_373_21
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(21691..22485)
DNA (795bp) protein (265aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B5F785
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC45987.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_4_scaffold_373_22
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(22570..24135)
DNA (1566bp) protein (522aa)
Probable molybdopterin oxidoreductase, membrane subunit {ECO:0000313|EMBL:CBH25245.1}; EC=1.2.7.- {ECO:0000313|EMBL:CBH25245.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II.
Fe-S-cluster-containing hydrogenase n=1 Tax=Salisaeta longa RepID=UPI0003B51F88
molybdopterin oxidoreductase, membrane subunit
qs_4_scaffold_373_23

Not on your lists

comp(24264..27896)
DNA (3633bp) protein (1211aa)
hmoA; molybdopterin oxidoreductase, iron-sulfur binding subunit (EC:1.2.7.-)
Molybdopterin oxidoreductase, iron-sulfur binding subunit n=1 Tax=Zobellia galactanivorans (strain DSM 12802 / CIP 106680 / NCIMB 13871 / Dsij) RepID=G0LBY8_ZOBGA
Uncharacterized protein {ECO:0000313|EMBL:KKM61206.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
qs_4_scaffold_373_24
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(27988..28635)
DNA (648bp) protein (216aa)
cytochrome C n=1 Tax=Salisaeta longa RepID=UPI0003B4CD1E
Cytochrome c3 {ECO:0000313|EMBL:ABV55244.1}; TaxID=29549 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus (Rhodot
cytochrome c family protein
qs_4_scaffold_373_25
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28990..29760)
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=Streptomyces sp. HPH0547 RepID=S3AR88_9ACTO
Hypothetical Protein
Uncharacterized protein {ECO:0000313|EMBL:AHY47489.1}; TaxID=42256 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubroba
Displaying 25 items

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