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qs_4_scaffold_913

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Displaying items 1-30 of 61 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_4_scaffold_913_1
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

72..1193
DNA (1122bp) protein (374aa)
histidinol-phosphate aminotransferase (EC:2.6.1.9)
Histidinol-phosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01023}; EC=2.6.1.9 {ECO:0000256|HAMAP-Rule:MF_01023};; Imidazole acetol-phosphate transaminase {ECO:0000256|HAMAP-Rule:MF_01023}; TaxID
histidinol-phosphate aminotransferase n=1 Tax=Salisaeta longa RepID=UPI0003B75BF1
qs_4_scaffold_913_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

1315..1911
DNA (597bp) protein (199aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B56395
hypothetical protein
Uncharacterized ACR {ECO:0000313|EMBL:CBH25274.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (s
qs_4_scaffold_913_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

2104..3828
DNA (1725bp) protein (575aa)
Putative cysteine ligase BshC {ECO:0000256|HAMAP-Rule:MF_01867, ECO:0000256|SAAS:SAAS00275526}; EC=6.-.-.- {ECO:0000256|HAMAP-Rule:MF_01867, ECO:0000256|SAAS:SAAS00275528};; TaxID=761659 species="Bact
UPF0747 protein SRU_2130 n=2 Tax=Salinibacter ruber RepID=Y2130_SALRD
hypothetical protein
qs_4_scaffold_913_4
Oscillatoriales cyanobacterium JSC-12, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(4210..4536)
DNA (327bp) protein (109aa)
Putative toxin-antitoxin system toxin component, PIN family n=1 Tax=Oscillatoriales cyanobacterium JSC-12 RepID=K8GGJ1_9CYAN
Putative toxin-antitoxin system toxin component, PIN family {ECO:0000313|EMBL:EKQ68028.1}; TaxID=864702 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales.;" source="Oscillatoria
Nucleotide-binding protein PINc
qs_4_scaffold_913_5
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5965..7113
DNA (1149bp) protein (383aa)
Integron integrase n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SJI9_THIDA
integron integrase
Integron integrase {ECO:0000313|EMBL:AAZ97168.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitr
qs_4_scaffold_913_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(6957..8141)
DNA (1185bp) protein (395aa)
dnaN; DNA polymerase III subunit beta; K02338 DNA polymerase III subunit beta [EC:2.7.7.7] id=24656813 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=761659 species="Bacter
dnaN; DNA polymerase III subunit beta
qs_4_scaffold_913_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(8396..10093)
DNA (1698bp) protein (566aa)
chromosomal replication initiation protein n=1 Tax=Salisaeta longa RepID=UPI0003B3B2F6
dnaA; chromosomal replication initiator protein dnaA
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377, ECO:0000256|SAAS:SAAS00009621}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis;
qs_4_scaffold_913_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

11029..11589
DNA (561bp) protein (187aa)
hypothetical protein
hypothetical protein; K07040 uncharacterized protein id=24656847 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH22958.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_4_scaffold_913_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


11628..11825
DNA (198bp) protein (66aa)
rpmF; 50S ribosomal protein L32
rpmF; 50S ribosomal protein L32; K02911 large subunit ribosomal protein L32 id=24656848 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
50S ribosomal protein L32 {ECO:0000256|HAMAP-Rule:MF_00340}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacte
qs_4_scaffold_913_10
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

12326..13393
DNA (1068bp) protein (356aa)
Phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054336}; EC=2.3.1.n2 {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054327};; Acyl-ACP phosphotransacylase
Phosphate acyltransferase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MH83_RHOM4
fatty acid/phospholipid synthesis protein PlsX
qs_4_scaffold_913_11
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

13517..14533
DNA (1017bp) protein (339aa)
3-oxoacyl-ACP synthase (EC:2.3.1.41)
3-oxoacyl-[acyl-carrier-protein] synthase 3 {ECO:0000256|HAMAP-Rule:MF_01815}; EC=2.3.1.180 {ECO:0000256|HAMAP-Rule:MF_01815};; 3-oxoacyl-[acyl-carrier-protein] synthase III {ECO:0000256|HAMAP-Rule:MF
3-oxoacyl-[acyl-carrier-protein] synthase 3 n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MH82_RHOM4
qs_4_scaffold_913_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

14575..15540
DNA (966bp) protein (322aa)
Malonyl CoA-acyl carrier protein transacylase {ECO:0000256|PIRNR:PIRNR000446, ECO:0000313|EMBL:CBH22962.1}; EC=2.3.1.39 {ECO:0000256|PIRNR:PIRNR000446, ECO:0000313|EMBL:CBH22962.1};; TaxID=761659 spec
ACP S-malonyltransferase n=1 Tax=Salisaeta longa RepID=UPI0003B59810
fabD; Malonyl CoA-acyl carrier protein transacylase
qs_4_scaffold_913_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

15737..16522
DNA (786bp) protein (262aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B3AFEE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH22963.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_4_scaffold_913_14
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

16621..17370
DNA (750bp) protein (250aa)
3-oxoacyl-(Acyl-carrier-protein) reductase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MH80_RHOM4
3-oxoacyl-ACP reductase
3-oxoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:ACY49669.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source
qs_4_scaffold_913_15
Marinobacter hydrocarbonoclasticus, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17470..18762)
DNA (1293bp) protein (431aa)
methionine-R-sulfoxide reductase (EC:1.8.4.11)
Methionine-R-sulfoxide reductase {ECO:0000313|EMBL:ABM18102.1}; EC=1.8.4.11 {ECO:0000313|EMBL:ABM18102.1};; Flags: Precursor;; TaxID=351348 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alte
Methionine-R-sulfoxide reductase n=1 Tax=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) RepID=A1TZD3_MARAV
qs_4_scaffold_913_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

19154..20647
DNA (1494bp) protein (498aa)
ATP-dependent RNA helicase; K05592 ATP-dependent RNA helicase DeaD [EC:3.6.4.13] id=24656854 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
ATP-dependent RNA helicase
ATP-dependent RNA helicase {ECO:0000313|EMBL:ABC46146.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter r
qs_4_scaffold_913_17
unknown

Not on your lists

20943..21296
DNA (354bp) protein (118aa)

This feature has no annotations

qs_4_scaffold_913_18
unknown

Not on your lists

comp(21332..21688)
DNA (357bp) protein (119aa)

This feature has no annotations

qs_4_scaffold_913_19
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

21708..22892
DNA (1185bp) protein (395aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H7J6_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24001.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_4_scaffold_913_20
Methanofollis liminatans, Methanofollis, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(22965..23453)
DNA (489bp) protein (163aa)
PilT protein domain protein n=1 Tax=Methanofollis liminatans DSM 4140 RepID=J0S6I9_9EURY
PilT protein domain protein {ECO:0000313|EMBL:EJG06144.1}; TaxID=28892 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Methanofollis.;" source="Methanofollis
Protein of unknown function DUF3368
qs_4_scaffold_913_21
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(23471..24649)
DNA (1179bp) protein (393aa)
Helix-turn-helix domain protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MKL6_RHOM4
helix-turn-helix domain-containing protein
Helix-turn-helix domain protein {ECO:0000313|EMBL:ACY49680.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodother
qs_4_scaffold_913_trna_4
unknown

Not on your lists

comp(25213..25287)
DNA (75bp)
transferRNA
qs_4_scaffold_913_trna_3
unknown

Not on your lists

comp(25358..25424)
DNA (67bp)
transferRNA
qs_4_scaffold_913_trna_2
unknown

Not on your lists

comp(25448..25519)
DNA (72bp)
transferRNA
qs_4_scaffold_913_22
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


25672..25833
DNA (162bp) protein (54aa)
50S ribosomal protein L34 n=1 Tax=Salisaeta longa RepID=UPI0003B5E529
rpmH; 50S ribosomal protein L34
50S ribosomal protein L34 {ECO:0000256|HAMAP-Rule:MF_00391, ECO:0000256|SAAS:SAAS00020245}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Sali
qs_4_scaffold_913_23
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(25847..28759)
DNA (2913bp) protein (971aa)
excinuclease ABC subunit A n=1 Tax=Salisaeta longa RepID=UPI0003B73FD8
uvrA; excinuclease ABC subunit A
UvrABC system protein A {ECO:0000256|SAAS:SAAS00088996}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ru
qs_4_scaffold_913_24
RIFOXYD1_FULL_Bdellovibrionales_53_11_curated, Bacteroivoracaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(28899..29273)
DNA (375bp) protein (125aa)
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AAA300-O17 RepID=UPI000374E374
hypothetical protein Tax=RIFOXYD1_FULL_Bdellovibrionales_53_11_curated
qs_4_scaffold_913_25
unknown

Not on your lists

comp(29309..29530)
DNA (222bp) protein (74aa)

This feature has no annotations

qs_4_scaffold_913_26
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

29792..31975
DNA (2184bp) protein (728aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HBZ9_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH25554.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_4_scaffold_913_27
unknown

Not on your lists

comp(32070..32648)
DNA (579bp) protein (193aa)

This feature has no annotations

Displaying items 1-30 of 61 in total

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