ggKbase home page

qs_4_scaffold_141

Search features with annotation key words

Displaying items 1-30 of 101 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_4_scaffold_141_1
uncultured Rhizobium sp. HF0500_35F13, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..1203
DNA (1203bp) protein (401aa)
arylsulfatase (EC:3.1.6.1)
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AAA164-E04 RepID=UPI00037E3611
Arylsulfatase A and related enzymes {ECO:0000313|EMBL:ADI22900.1}; Flags: Fragment;; TaxID=723627 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacte
qs_4_scaffold_141_2
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(1445..3310)
DNA (1866bp) protein (622aa)
Lytic transglycosylase catalytic n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MD11_RHOM4
lytic transglycosylase
Lytic transglycosylase catalytic {ECO:0000313|EMBL:ACY47121.1}; Flags: Precursor;; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.
qs_4_scaffold_141_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(3967..5589)
DNA (1623bp) protein (541aa)
Putative propionyl-CoA carboxylase beta chain protein {ECO:0000313|EMBL:ABC45119.1}; EC=6.4.1.3 {ECO:0000313|EMBL:ABC45119.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. I
methylmalonyl-CoA carboxyltransferase n=1 Tax=Salisaeta longa RepID=UPI0003B78EFA
pccB; propionyl-CoA carboxylase subunit beta protein
qs_4_scaffold_141_4
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(5894..6775)
DNA (882bp) protein (294aa)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000
Shikimate dehydrogenase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SEA1_RHOMR
shikimate dehydrogenase
qs_4_scaffold_141_5
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(6807..9209)
DNA (2403bp) protein (801aa)
Sodium/hydrogen exchanger n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SIN3_RHOMR
sodium/hydrogen exchanger
Sodium/hydrogen exchanger {ECO:0000313|EMBL:AEN72366.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus ma
qs_4_scaffold_141_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(9729..10391)
DNA (663bp) protein (221aa)
potassium transporter TrkA n=1 Tax=Salisaeta longa RepID=UPI0003B6ABA0
trkA3; Trk potassium uptake system protein
Trk potassium uptake system protein {ECO:0000313|EMBL:CBH25415.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salin
qs_4_scaffold_141_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(10449..11924)
DNA (1476bp) protein (492aa)
TrkH potassium uptake protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S0A8_SALRD
trkH1; TrkH potassium uptake protein
TrkH potassium uptake protein {ECO:0000313|EMBL:ABC44413.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacte
qs_4_scaffold_141_8
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

12698..14179
DNA (1482bp) protein (494aa)
Glutamate dehydrogenase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MD96_RHOM4
Glu/Leu/Phe/Val dehydrogenase
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus ma
qs_4_scaffold_141_9
RLO_RIF_OD1_05_38_22, RIF-OD1-5, Parcubacteria, Bacteria

Not on your lists

comp(14266..14793)
DNA (528bp) protein (176aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_05_38_22_curated
qs_4_scaffold_141_10
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(15224..15721)
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Leptolyngbya sp. PCC 6406 RepID=L8L6C0_9CYAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ22340.1}; TaxID=1173027 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus sp. PCC 7113.;"
qs_4_scaffold_141_11
Nodosilinea nodulosa, Nodosilinea, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(15714..15989)
DNA (276bp) protein (92aa)
hypothetical protein n=1 Tax=Nodosilinea nodulosa RepID=UPI0002FEA71C
qs_4_scaffold_141_12
Roseibium sp. TrichSKD4, Roseibium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16075..16464)
DNA (390bp) protein (130aa)
DNA methylase N-4/N-6 domain-containing protein {ECO:0000313|EMBL:EFO32454.1}; TaxID=744980 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseibium.;" sour
qs_4_scaffold_141_13
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(16567..19773)
DNA (3207bp) protein (1069aa)
Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=2 Tax=Singulisphaera acidiphila RepID=L0DF88_SINAD
ribonucleoside-diphosphate reductase
Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent {ECO:0000313|EMBL:AGA27520.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Si
qs_4_scaffold_141_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(20191..21135)
DNA (945bp) protein (315aa)
aminotransferase; K00824 D-alanine transaminase [EC:2.6.1.21] id=24657392 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Aminotransferase, class IV superfamily {ECO:0000313|EMBL:ABC43848.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sa
aminotransferase
qs_4_scaffold_141_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(21202..22182)
DNA (981bp) protein (327aa)
ldh; L-lactate dehydrogenase; K00016 L-lactate dehydrogenase [EC:1.1.1.27] id=24657549 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
L-lactate dehydrogenase {ECO:0000255|HAMAP-Rule:MF_00488}; Short=L-LDH {ECO:0000255|HAMAP-Rule:MF_00488};; EC=1.1.1.27 {ECO:0000255|HAMAP-Rule:MF_00488};; TaxID=309807 species="Bacteria; Bacteroidetes
ldh; L-lactate dehydrogenase
qs_4_scaffold_141_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(22351..23964)
DNA (1614bp) protein (538aa)
hypothetical protein
hypothetical protein; K07028 id=24659408 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:ABC46124.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_4_scaffold_141_17
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

24365..25882
DNA (1518bp) protein (506aa)
beta-lactamase n=1 Tax=Salisaeta longa RepID=UPI0003B6603E
Rhodanese-like protein
Beta-lactamase domain protein {ECO:0000313|EMBL:ACY47173.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermu
qs_4_scaffold_141_18
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(25906..26355)
DNA (450bp) protein (150aa)
hypothetical protein
hypothetical protein id=24657851 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:ABC44156.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_4_scaffold_141_19
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26778..29459
DNA (2682bp) protein (894aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:53 RepID=R5WUP1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCZ96202.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes
qs_4_scaffold_141_20
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(29315..30076)
DNA (762bp) protein (254aa)
HAD family hydrolase n=1 Tax=Salisaeta longa RepID=UPI0003B487D4
HAD-superfamily hydrolase
HAD superfamily (Subfamily IA) hydrolase {ECO:0000313|EMBL:CBH25385.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="
qs_4_scaffold_141_21
Methylococcaceae bacterium Sn10-6, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30386..30637)
DNA (252bp) protein (84aa)
Plasmid stabilization system n=1 Tax=Anabaena cylindrica (strain ATCC 27899 / PCC 7122) RepID=K9ZQW3_ANACC
Plasmid stabilization protein {ECO:0000313|EMBL:KJV04959.1}; TaxID=1632867 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae.;" source="Methylococcaceae bacteri
plasmid stabilization system
qs_4_scaffold_141_22
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30666..30956)
DNA (291bp) protein (97aa)
Addiction module antidote protein, CC2985 family n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C0T0_NITHN
addiction module antidote protein
Addiction module antidote protein, CC2985 family {ECO:0000313|EMBL:ADE16403.1}; TaxID=472759 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" sourc
qs_4_scaffold_141_23
unknown

Not on your lists

31187..31441
DNA (255bp) protein (85aa)

This feature has no annotations

qs_4_scaffold_141_24
unknown

Not on your lists

31708..32322
DNA (615bp) protein (205aa)

This feature has no annotations

qs_4_scaffold_141_25
RIFOXYA2_FULL_OD1_Falkowbacteria_47_9_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

32326..34200
DNA (1875bp) protein (625aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI00036F2032
regulator of chromosome condensation Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_47_9_curated
qs_4_scaffold_141_26
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(34432..35907)
DNA (1476bp) protein (492aa)
hypothetical protein n=1 Tax=Halomicrobium katesii RepID=UPI0003751B65
glycoside hydrolase family protein
Glycoside hydrolase family 18 {ECO:0000313|EMBL:ACV49253.1}; Flags: Precursor;; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="
qs_4_scaffold_141_27
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(36104..39241)
DNA (3138bp) protein (1046aa)
Serpin (Serine proteinase inhibitor) n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HBT3_SALRM
serine proteinase inhibitor
Serpin (Serine proteinase inhibitor) {ECO:0000313|EMBL:CBH25488.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sali
qs_4_scaffold_141_28
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(39472..42801)
DNA (3330bp) protein (1110aa)
peptidase S41 n=1 Tax=Salisaeta longa RepID=UPI0003B34CAA
peptidase S41
Peptidase S41 {ECO:0000313|EMBL:AEN74205.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus SG0.5J
qs_4_scaffold_141_29
Balneola vulgaris, Balneola, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(42928..43509)
DNA (582bp) protein (194aa)
hypothetical protein n=1 Tax=Balneola vulgaris RepID=UPI00037E47E1
qs_4_scaffold_141_30
Nitritalea halalkaliphila, Nitritalea, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(43596..45119)
DNA (1524bp) protein (508aa)
RagB/SusD domain-containing protein n=1 Tax=Nitritalea halalkaliphila LW7 RepID=I5C1K5_9BACT
RagB/SusD domain-containing protein {ECO:0000313|EMBL:EIM75707.1}; TaxID=1189621 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Nitritalea.;" source="Nitritalea halalka
RagB/SusD domain-containing protein
Displaying items 1-30 of 101 in total

View Taxonomy