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QS_4_Bacteroidetes_Order_II__Incertae_sedis_67_15

In projects: QS_4

Consensus taxonomy: Bacteroidetes Order II. Incertae sedis  →  Bacteroidetes  →  Bacteria

Taxonomy override: Bacteroidetes

Metagenomic Context

Parent: QS_4_UNK

Properties

Avg. coverage: 15.01 Longest contig: 135.36 Kbp Bin length: 2.55 Mbp GC content: 67.24 %
Contigs count: 96 Features count: 2238 rRNAs count: 1 tRNAs count: 36

Genome completeness

near complete RP 51 / 55 MC: 2 BSCG 50 / 51 MC: 1 ASCG 13 / 38
Displaying items 1-50 of 96 in total
contig # features sequence size GC content (%) Cov Coding Density (%) notes
qs_4_scaffold_1807
Phylum: Bacteroidetes (50%)
6 8327 bp 65.98 17.91 84.59
qs_4_scaffold_1856
Phylum: Bacteroidetes (85.71%)
7 12567 bp 67.04 17.32 91.62
qs_4_scaffold_186
Order: Bacteroidetes Order II. Incertae sedis (52.63%)
57 63933 bp 66.12 17.22 73.01
qs_4_scaffold_1142
Order: Bacteroidetes Order II. Incertae sedis (50%)
10 12772 bp 67.91 16.86 93.44
qs_4_scaffold_624
Species: Salinibacter ruber (50%)
20 21056 bp 67.06 16.80 81.61
qs_4_scaffold_1017
Order: Bacteroidetes Order II. Incertae sedis (52.78%)
36 43893 bp 67.89 16.53 81.85
qs_4_scaffold_141
Phylum: Bacteroidetes (57.43%)
101 135362 bp 66.92 16.44 86.66
qs_4_scaffold_1284
Order: Bacteroidetes Order II. Incertae sedis (63.64%)
11 11429 bp 66.96 16.39 84.50
qs_4_scaffold_1513
Order: Bacteroidetes Order II. Incertae sedis (58.33%)
12 16103 bp 66.24 16.36 74.78
qs_4_scaffold_1024
Species: Salinibacter ruber (54.17%)
24 30595 bp 68.50 16.32 84.09
qs_4_scaffold_1363
Order: Bacteroidetes Order II. Incertae sedis (54.55%)
11 17763 bp 66.67 16.20 88.18
qs_4_scaffold_4431
Species: Salinibacter ruber (60%)
5 6377 bp 66.57 16.14 82.94
qs_4_scaffold_499
Order: Bacteroidetes Order II. Incertae sedis (55.88%)
34 45926 bp 66.85 16.11 83.22
qs_4_scaffold_1032
Species: Salinibacter ruber (71.43%)
14 13848 bp 68.04 16.03 85.12
qs_4_scaffold_1187
Order: Bacteroidetes Order II. Incertae sedis (60.78%)
51 68046 bp 67.66 15.96 85.81
qs_4_scaffold_829
Order: Bacteroidetes Order II. Incertae sedis (80.95%)
21 24322 bp 67.49 15.94 88.91
qs_4_scaffold_516
Phylum: Bacteroidetes (52.94%)
34 34965 bp 68.21 15.94 82.20
qs_4_scaffold_3065
Order: Bacteroidetes Order II. Incertae sedis (80%)
5 5113 bp 65.11 15.90 80.03
qs_4_scaffold_2858
Order: Bacteroidetes Order II. Incertae sedis (60%)
5 5459 bp 64.81 15.83 76.44
qs_4_scaffold_1100
Order: Bacteroidetes Order II. Incertae sedis (60%)
15 14812 bp 68.24 15.72 86.04
qs_4_scaffold_913
Order: Bacteroidetes Order II. Incertae sedis (60.66%)
61 65536 bp 67.26 15.72 82.29
qs_4_scaffold_504
Order: Bacteroidetes Order II. Incertae sedis (58%)
50 52520 bp 67.35 15.63 85.01
qs_4_scaffold_2405
Species: Salinibacter ruber (66.67%)
6 6363 bp 67.25 15.61 85.24
qs_4_scaffold_737
Order: Bacteroidetes Order II. Incertae sedis (68.75%)
32 35864 bp 67.90 15.47 83.34
qs_4_scaffold_1023
Phylum: Bacteroidetes (52.94%)
17 26592 bp 65.15 15.45 88.61
qs_4_scaffold_779
Order: Bacteroidetes Order II. Incertae sedis (64.41%)
59 58250 bp 67.50 15.41 82.52
qs_4_scaffold_1287
Species: Salinibacter ruber (58.33%)
12 11419 bp 64.84 15.40 83.57
qs_4_scaffold_1548
Species: Salinibacter ruber (85.71%)
7 9669 bp 67.94 15.40 83.06
qs_4_scaffold_867
Order: Bacteroidetes Order II. Incertae sedis (62.96%)
27 37355 bp 67.77 15.39 83.74
qs_4_scaffold_351
Order: Bacteroidetes Order II. Incertae sedis (66.67%)
51 57809 bp 68.69 15.38 86.17
qs_4_scaffold_974
Species: Salinibacter ruber (66.67%)
15 14539 bp 68.51 15.35 83.97
qs_4_scaffold_506
Order: Bacteroidetes Order II. Incertae sedis (70.49%)
61 67529 bp 67.75 15.32 83.83
qs_4_scaffold_827
Order: Bacteroidetes Order II. Incertae sedis (73.68%)
19 24569 bp 67.07 15.28 89.31
qs_4_scaffold_225
Species: Salinibacter ruber (52.78%)
36 43276 bp 67.74 15.27 86.40
qs_4_scaffold_1698
Order: Bacteroidetes Order II. Incertae sedis (77.78%)
9 8815 bp 68.09 15.26 80.15
qs_4_scaffold_1679
Order: Bacteroidetes Order II. Incertae sedis (71.43%)
7 9987 bp 69.44 15.21 87.59
qs_4_scaffold_487
Order: Bacteroidetes Order II. Incertae sedis (54.84%)
31 29263 bp 68.69 15.20 85.75
qs_4_scaffold_1531
Species: Salinibacter ruber (57.14%)
14 17294 bp 68.33 15.17 88.57
qs_4_scaffold_252
Order: Bacteroidetes Order II. Incertae sedis (55.36%)
56 67215 bp 66.73 15.12 88.29
qs_4_scaffold_526
Species: Salinibacter ruber (50%)
28 29590 bp 68.54 14.94 85.93
qs_4_scaffold_547
Species: Salinibacter ruber (55.88%)
68 73460 bp 67.50 14.93 84.61
qs_4_scaffold_3808
Species: Flammeovirgaceae bacterium 311 (50%)
2 4266 bp 67.65 14.84 85.94
qs_4_scaffold_3501
Species: Salinibacter ruber (66.67%)
15 11907 bp 67.91 14.80 81.91
qs_4_scaffold_1426
Phylum: Bacteroidetes (55.56%)
9 10398 bp 67.89 14.76 89.87
qs_4_scaffold_5031
Species: Salinibacter ruber (66.67%)
3 3440 bp 67.21 14.71 79.27
qs_4_scaffold_1084
Phylum: Bacteroidetes (70.59%)
17 21370 bp 66.72 14.66 83.65
qs_4_scaffold_299
Order: Bacteroidetes Order II. Incertae sedis (66.67%)
33 39746 bp 68.32 14.65 86.60
qs_4_scaffold_2168
Species: Salinibacter ruber (57.14%)
14 13392 bp 67.66 14.62 80.51
qs_4_scaffold_765
Order: Bacteroidetes Order II. Incertae sedis (52%)
25 34446 bp 65.96 14.59 87.36
qs_4_scaffold_812
Order: Bacteroidetes Order II. Incertae sedis (68.42%)
57 63622 bp 67.87 14.55 88.02
Displaying items 1-50 of 96 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.