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qs_4_scaffold_1032

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_4_scaffold_1032_1
unknown

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1..879
DNA (879bp) protein (293aa)

This feature has no annotations

qs_4_scaffold_1032_2
Zobellia galactanivorans, Zobellia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(991..3201)
DNA (2211bp) protein (737aa)
sulfatase (EC:3.1.6.-)
Sulfatase, family S1-20 {ECO:0000313|EMBL:CAZ97655.1}; EC=3.1.6.- {ECO:0000313|EMBL:CAZ97655.1};; TaxID=63186 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Zob
Sulfatase, family S1-20 n=1 Tax=Zobellia galactanivorans (strain DSM 12802 / CIP 106680 / NCIMB 13871 / Dsij) RepID=G0L158_ZOBGA
qs_4_scaffold_1032_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(3563..4585)
DNA (1023bp) protein (341aa)
Tetratricopeptide repeat family protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S6M0_SALRD
hypothetical protein
Tetratricopeptide repeat family protein {ECO:0000313|EMBL:ABC45722.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="S
qs_4_scaffold_1032_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(4762..5412)
DNA (651bp) protein (217aa)
RNA polymerase sigma-70 factor
RNA polymerase sigma-70 factor id=24656815 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
RNA polymerase sigma-70 factor, putative {ECO:0000313|EMBL:ABC45273.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="
qs_4_scaffold_1032_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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5637..6086
DNA (450bp) protein (150aa)
50S ribosomal protein L13 n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H4K2_SALRM
rplM; 50S ribosomal protein L13
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|SAAS:SAAS00083943}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Sali
qs_4_scaffold_1032_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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6176..6565
DNA (390bp) protein (130aa)
30S ribosomal protein S9 n=1 Tax=Salisaeta longa RepID=UPI0003B59691
rpsI; 30S ribosomal protein S9
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003816}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salin
qs_4_scaffold_1032_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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6756..7736
DNA (981bp) protein (327aa)
30S ribosomal protein S2 n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H4K0_SALRM
rpsB; 30S ribosomal protein S2
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291, ECO:0000313|EMBL:CBH22955.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinib
qs_4_scaffold_1032_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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7835..8683
DNA (849bp) protein (283aa)
tsf; translation elongation factor Ts
tsf; translation elongation factor Ts; K02357 elongation factor Ts id=24656843 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Elongation factor Ts {ECO:0000255|HAMAP-Rule:MF_00050}; Short=EF-Ts {ECO:0000255|HAMAP-Rule:MF_00050};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodother
qs_4_scaffold_1032_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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8879..9736
DNA (858bp) protein (286aa)
Uridylate kinase {ECO:0000255|HAMAP-Rule:MF_01220}; Short=UK {ECO:0000255|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000255|HAMAP-Rule:MF_01220};; Uridine monophosphate kinase {ECO:0000255|HAMAP-Rule:MF
Uridylate kinase n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=PYRH_SALRD
pyrH; uridylate kinase
qs_4_scaffold_1032_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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9823..10392
DNA (570bp) protein (190aa)
Ribosome-recycling factor n=2 Tax=Salinibacter ruber RepID=RRF_SALRD
frr; ribosome recycling factor
Ribosome-recycling factor {ECO:0000255|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000255|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000255|HAMAP-Rule:MF_00040}; TaxID=309807 species="Bacteria;
qs_4_scaffold_1032_trna_1
unknown

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10547..10634
DNA (88bp)
transferRNA
qs_4_scaffold_1032_11
Synechococcus sp. JA-2-3B'a(2-13), Synechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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10805..11053
DNA (249bp) protein (83aa)
Putative uncharacterized protein n=1 Tax=Synechococcus sp. (strain JA-2-3B'a(2-13)) RepID=Q2JN77_SYNJB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD01798.1}; TaxID=321332 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus.;" source="Synechococcus sp. (strain JA-2-3B'a
qs_4_scaffold_1032_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(11148..13334)
DNA (2187bp) protein (729aa)
TonB-denpendent receptor n=1 Tax=Salisaeta longa RepID=UPI0003B464D7
btuB; vitamin B12 transporter btuB
Vitamin B12 transporter btuB [Precursor] {ECO:0000313|EMBL:CBH25865.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="
qs_4_scaffold_1032_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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13447..13848
DNA (402bp) protein (134aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B71750
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC44657.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
Displaying 14 items

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