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qs_4_scaffold_186

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Displaying items 1-30 of 57 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_4_scaffold_186_1
Solemya velum gill symbiont, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

236..1873
DNA (1638bp) protein (546aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KHF24527.1}; TaxID=2340 species="Bacteria; Proteobacteria; Gammaproteobacteria; sulfur-oxidizing symbionts.;" source="Solemya velum gill symbiont.;"
id=2037281 bin=GWE2_Bacteroidetes_42_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes
qs_4_scaffold_186_2
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(2066..2350)
DNA (285bp) protein (95aa)
CRISPR-associated protein Cas2 n=1 Tax=Salisaeta longa RepID=UPI0003B6AACA
CRISPR-associated protein Cas2
CRISPR-associated protein Cas2 {ECO:0000313|EMBL:ACY47389.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodotherm
qs_4_scaffold_186_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

2471..3910
DNA (1440bp) protein (480aa)
trmE; tRNA modification GTPase TrmE; K03650 tRNA modification GTPase [EC:3.6.-.-] id=24656865 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
tRNA modification GTPase MnmE {ECO:0000255|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000255|HAMAP-Rule:MF_00379};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; R
trmE; tRNA modification GTPase TrmE
qs_4_scaffold_186_4
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

4324..5541
DNA (1218bp) protein (406aa)
Argininosuccinate synthase {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00013047}; EC=6.3.4.5 {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00009947};; Citrulline--aspartate ligase
Argininosuccinate synthase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MH59_RHOM4
argininosuccinate synthase
qs_4_scaffold_186_5
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

5686..6834
DNA (1149bp) protein (383aa)
Uncharacterized protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MH58_RHOM4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY47843.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus mari
qs_4_scaffold_186_6
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

6923..8044
DNA (1122bp) protein (374aa)
N-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38)
N-acetyl-gamma-glutamyl-phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00150, ECO:0000256|SAAS:SAAS00137393}; Short=AGPR {ECO:0000256|HAMAP-Rule:MF_00150};; EC=1.2.1.38 {ECO:0000256|HAMAP-Rule:MF_0015
N-acetyl-gamma-glutamyl-phosphate reductase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SJF8_RHOMR
qs_4_scaffold_186_7
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

8096..9286
DNA (1191bp) protein (397aa)
acetylornithine/succinyldiaminopimelate aminotransferase (EC:2.6.1.11)
Acetylornithine aminotransferase {ECO:0000256|HAMAP-Rule:MF_01107}; Short=ACOAT {ECO:0000256|HAMAP-Rule:MF_01107};; EC=2.6.1.11 {ECO:0000256|HAMAP-Rule:MF_01107};; TaxID=762570 species="Bacteria; Bact
Acetylornithine aminotransferase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SJF9_RHOMR
qs_4_scaffold_186_8
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

9286..10344
DNA (1059bp) protein (353aa)
N-acetylornithine carbamoyltransferase (EC:2.1.3.9)
N-acetylornithine carbamoyltransferase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SJG0_RHOMR
Aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain protein {ECO:0000313|EMBL:ACY47840.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodot
qs_4_scaffold_186_9
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

10422..11210
DNA (789bp) protein (263aa)
Acetylglutamate kinase {ECO:0000256|HAMAP-Rule:MF_00082}; EC=2.7.2.8 {ECO:0000256|HAMAP-Rule:MF_00082};; N-acetyl-L-glutamate 5-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00082}; NAG kinase {ECO:00
Acetylglutamate kinase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MH54_RHOM4
acetylglutamate kinase
qs_4_scaffold_186_10
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

11259..12347
DNA (1089bp) protein (363aa)
Peptidase M20 n=2 Tax=Rhodothermus marinus RepID=D0MJ50_RHOM4
peptidase M20
Peptidase M20 {ECO:0000313|EMBL:AEN73109.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus SG0.5J
qs_4_scaffold_186_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

12383..13705
DNA (1323bp) protein (441aa)
Argininosuccinate lyase {ECO:0000313|EMBL:ABC44970.1}; EC=4.3.2.1 {ECO:0000313|EMBL:ABC44970.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae
Argininosuccinate lyase n=2 Tax=Salinibacter ruber RepID=D5HBG4_SALRM
argH; argininosuccinate lyase
qs_4_scaffold_186_12
unknown

Not on your lists

13702..13800
DNA (99bp) protein (33aa)

This feature has no annotations

qs_4_scaffold_186_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(14044..14850)
DNA (807bp) protein (269aa)
protein PASTA domain-containing protein
protein PASTA domain-containing protein id=24658634 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
PASTA domain protein {ECO:0000313|EMBL:ABC44475.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (
qs_4_scaffold_186_14
unknown

Not on your lists

comp(14893..15663)
DNA (771bp) protein (257aa)

This feature has no annotations

qs_4_scaffold_186_16S_1
unknown

Not on your lists

15916..17442
DNA (1527bp)
qs_4_scaffold_186_trna_1
unknown

Not on your lists

17664..17738
DNA (75bp)
transferRNA
qs_4_scaffold_186_trna_2
unknown

Not on your lists

17832..17904
DNA (73bp)
transferRNA
qs_4_scaffold_186_15
RBG_13_Actinobacteria_63_9_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

20568..20846
DNA (279bp) protein (93aa)
Homing endonuclease n=1 Tax=uncultured Chloroflexi bacterium RepID=H5SF27_9CHLR
Homing endonuclease LAGLIDADG/HNH Tax=RBG_13_Actinobacteria_63_9_curated
Homing endonuclease LAGLIDADG/HNH
qs_4_scaffold_186_16
Rivularia sp. PCC 7116, Rivularia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(22447..22863)
DNA (417bp) protein (139aa)
hypothetical protein n=1 Tax=Calothrix sp. PCC 7103 RepID=UPI00030971BC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFY56467.1}; TaxID=373994 species="Bacteria; Cyanobacteria; Nostocales; Rivulariaceae; Rivularia.;" source="Rivularia sp. PCC 7116.;"
qs_4_scaffold_186_17
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

23108..25444
DNA (2337bp) protein (779aa)
phosphoribosylformylglycinamidine synthase 2 (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase subunit PurL {ECO:0000256|HAMAP-Rule:MF_00420}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_00420};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_00420};; Formyl
Phosphoribosylformylglycinamidine synthase 2 n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SEB7_RHOMR
qs_4_scaffold_186_18
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(25727..28918)
DNA (3192bp) protein (1064aa)
WD40-like beta Propeller containing protein n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SE95_RHOMR
WD40-like beta propeller containing protein
WD40-like beta Propeller containing protein {ECO:0000313|EMBL:AEN72087.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" sourc
qs_4_scaffold_186_19
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(29768..30547)
DNA (780bp) protein (260aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MDA3_RHOM4
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ACY49015.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="R
qs_4_scaffold_186_20
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

30694..31812
DNA (1119bp) protein (373aa)
Uncharacterized protein n=1 Tax=Cyclobacterium marinum (strain ATCC 25205 / DSM 745) RepID=G0IVV6_CYCMS
Uncharacterized protein {ECO:0000313|EMBL:EMA50893.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qs_4_scaffold_186_21
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(32005..33126)
DNA (1122bp) protein (374aa)
Transposase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H559_SALRM
transposase
Transposase {ECO:0000313|EMBL:CBH23164.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (strain M8
qs_4_scaffold_186_22
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(33303..36203)
DNA (2901bp) protein (967aa)
Phosphoenolpyruvate carboxylase {ECO:0000256|HAMAP-Rule:MF_00595, ECO:0000256|SAAS:SAAS00018769}; Short=PEPC {ECO:0000256|HAMAP-Rule:MF_00595};; Short=PEPCase {ECO:0000256|HAMAP-Rule:MF_00595};; EC=4.
Phosphoenolpyruvate carboxylase n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S6D5_SALRD
ppc; phosphoenolpyruvate carboxylase
qs_4_scaffold_186_23
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(36480..37670)
DNA (1191bp) protein (397aa)
hydroxyglutarate oxidase n=1 Tax=Salisaeta longa RepID=UPI0003B75A2F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH25901.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_4_scaffold_186_24
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37755..38819)
DNA (1065bp) protein (355aa)
Capsule biosynthesis protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9PM67_9DELT
Capsule biosynthesis protein {ECO:0000313|EMBL:EPX64091.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" sourc
capsule biosynthesis protein, capa family
qs_4_scaffold_186_25
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

39157..40254
DNA (1098bp) protein (366aa)
hypothetical protein
hypothetical protein id=24658715 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:ABC45350.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_4_scaffold_186_26
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

40367..41185
DNA (819bp) protein (273aa)
Oxidoreductase aldo/keto reductase family n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JY12_9BACT
Oxidoreductase aldo/keto reductase family {ECO:0000313|EMBL:ELR73063.1}; TaxID=1237149 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga im
aldo/keto reductase
qs_4_scaffold_186_27
Gloeobacter kilaueensis, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

Not on your lists

41264..42355
DNA (1092bp) protein (364aa)
topA; DNA topoisomerase I (EC:5.99.1.2)
DNA topoisomerase I {ECO:0000313|EMBL:AGY59939.1}; EC=5.99.1.2 {ECO:0000313|EMBL:AGY59939.1};; TaxID=1183438 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gl
DNA topoisomerase I n=1 Tax=Acaryochloris sp. CCMEE 5410 RepID=UPI0002484ED8
Displaying items 1-30 of 57 in total

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