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qs_4_scaffold_222

Search features with annotation key words

Displaying items 1-30 of 48 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_4_scaffold_222_1
unknown

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1..228
DNA (228bp) protein (76aa)

This feature has no annotations

qs_4_scaffold_222_2
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

265..1887
DNA (1623bp) protein (541aa)
L-aspartate oxidase (EC:1.4.3.16)
L-aspartate oxidase {ECO:0000256|RuleBase:RU362049}; EC=1.4.3.16 {ECO:0000256|RuleBase:RU362049};; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermacea
L-aspartate oxidase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SG75_RHOMR
qs_4_scaffold_222_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

2238..2723
DNA (486bp) protein (162aa)
hypothetical protein n=1 Tax=Salinibacter ruber RepID=UPI000066E350
hypothetical protein
Ribosome maturation factor RimP {ECO:0000255|HAMAP-Rule:MF_01077}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salin
qs_4_scaffold_222_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

2846..4528
DNA (1683bp) protein (561aa)
nusA; transcription elongation factor NusA
nusA; transcription elongation factor NusA; K02600 N utilization substance protein A id=24659739 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salini
qs_4_scaffold_222_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

4664..5197
DNA (534bp) protein (178aa)
infB; translation initiation factor IF-2
infB; translation initiation factor IF-2; K02519 translation initiation factor IF-2 id=24659738 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermac
qs_4_scaffold_222_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

5175..7418
DNA (2244bp) protein (748aa)
translation initiation factor IF-2 n=1 Tax=Salisaeta longa RepID=UPI0003B318E0
infB; translation initiation factor IF-2
Translation initiation factor IF-2 {ECO:0000255|HAMAP-Rule:MF_00100}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sa
qs_4_scaffold_222_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

7565..7978
DNA (414bp) protein (138aa)
rbfA; ribosome-binding factor A
rbfA; ribosome-binding factor A; K02834 ribosome-binding factor A id=24659737 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003, ECO:0000313|EMBL:CBH24909.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salini
qs_4_scaffold_222_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

8133..9101
DNA (969bp) protein (323aa)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=309807 species="Bacteria; Bacteroidete
Riboflavin biosynthesis protein RibF n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S1N9_SALRD
ribF; riboflavin biosynthesis protein RibF
qs_4_scaffold_222_9
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


9189..9455
DNA (267bp) protein (89aa)
30S ribosomal protein S15 n=1 Tax=Salisaeta longa RepID=UPI0003B518AD
30S ribosomal protein S15
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343, ECO:0000256|RuleBase:RU003920}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhod
qs_4_scaffold_222_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

9563..11782
DNA (2220bp) protein (740aa)
Polyribonucleotide nucleotidyltransferase {ECO:0000255|HAMAP-Rule:MF_01595}; EC=2.7.7.8 {ECO:0000255|HAMAP-Rule:MF_01595};; Polynucleotide phosphorylase {ECO:0000255|HAMAP-Rule:MF_01595}; Short=PNPase
polynucleotide phosphorylase n=1 Tax=Salisaeta longa RepID=UPI0003B77F56
pnp; polynucleotide phosphorylase/polyadenylase
qs_4_scaffold_222_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(11907..12827)
DNA (921bp) protein (307aa)
miaA; tRNA delta(2)-isopentenylpyrophosphate transferase; K00791 tRNA dimethylallyltransferase [EC:2.5.1.75] id=24659450 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate
miaA; tRNA delta(2)-isopentenylpyrophosphate transferase
qs_4_scaffold_222_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

13010..13921
DNA (912bp) protein (304aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B5A446
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH25357.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_4_scaffold_222_13
unknown

Not on your lists

comp(13837..14055)
DNA (219bp) protein (73aa)

This feature has no annotations

qs_4_scaffold_222_14
Gloeobacter violaceus, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

Not on your lists

comp(14289..15179)
DNA (891bp) protein (297aa)
xanthorhodopsin n=1 Tax=Salisaeta longa RepID=UPI0003B640DC
bacterioopsin
Gll0198 protein {ECO:0000313|EMBL:BAC88139.1}; TaxID=251221 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter violaceus (strain PCC 7421).;"
qs_4_scaffold_222_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(15324..16100)
DNA (777bp) protein (259aa)
licopene beta-cyclase n=1 Tax=Salisaeta longa RepID=UPI0003B62A0A
crtY; licopene beta-cyclase
Licopene beta-cyclase {ECO:0000313|EMBL:ABC44770.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber
qs_4_scaffold_222_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(16149..17714)
DNA (1566bp) protein (522aa)
Beta-carotene ketolase {ECO:0000313|EMBL:ABC43974.1}; EC=1.14.99.- {ECO:0000313|EMBL:ABC43974.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermacea
FAD-dependent oxidoreductase n=1 Tax=Salisaeta longa RepID=UPI0003B426D8
crtO; beta-carotene ketolase
qs_4_scaffold_222_17
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

17899..18516
DNA (618bp) protein (206aa)
Kynurenine formamidase {ECO:0000255|HAMAP-Rule:MF_01969}; Short=KFA {ECO:0000255|HAMAP-Rule:MF_01969};; Short=KFase {ECO:0000255|HAMAP-Rule:MF_01969};; EC=3.5.1.9 {ECO:0000255|HAMAP-Rule:MF_01969};; A
kynurenine formamidase n=1 Tax=Salisaeta longa RepID=UPI0003B6C9A6
cyclase superfamily protein
qs_4_scaffold_222_18
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

18629..19834
DNA (1206bp) protein (402aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B43B8B
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24624.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_4_scaffold_222_19
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(19857..20783)
DNA (927bp) protein (309aa)
Tyrosine recombinase xerD n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9C2_SALRM
xerD; tyrosine recombinase XerD
Tyrosine recombinase xerD {ECO:0000313|EMBL:CBH24627.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ru
qs_4_scaffold_222_20
Pseudomonas sp. MT-1, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21233..21682
DNA (450bp) protein (150aa)
aldehyde dehydrogenase n=1 Tax=Pseudomonas stutzeri RepID=UPI00030E009C
NAD-dependent aldehyde dehydrogenase {ECO:0000313|EMBL:BAP80630.1}; TaxID=150396 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseud
aldehyde dehydrogenase
qs_4_scaffold_222_21
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

21800..22690
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9C7_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24632.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_4_scaffold_222_22
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

22700..23668
DNA (969bp) protein (323aa)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00002696}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00002685};;
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S2E5_SALRD
purC; phosphoribosylaminoimidazolesuccinocarboxamide synthase
qs_4_scaffold_222_23
Pelagibacterium halotolerans, Pelagibacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23741..24508
DNA (768bp) protein (256aa)
3-oxoacyl-(Acyl-carrier protein) reductase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RBZ1_PELHB
3-oxoacyl-ACP reductase
3-oxoacyl-(Acyl-carrier protein) reductase {ECO:0000313|EMBL:AEQ51639.1}; TaxID=1082931 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Pelagibacterium.;" sourc
qs_4_scaffold_222_24
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(24743..25729)
DNA (987bp) protein (329aa)
cation transporter n=1 Tax=Salisaeta longa RepID=UPI0003B4A193
cation diffusion facilitator family transporter
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:ACY47805.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" s
qs_4_scaffold_222_25
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(25726..26589)
DNA (864bp) protein (288aa)
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SGB5_RHOMR
nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase {ECO:0000313|EMBL:AEN73316.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae;
qs_4_scaffold_222_26
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(26707..27150)
DNA (444bp) protein (148aa)
Molybdopterin biosynthesis MoaE protein n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SGB6_RHOMR
molybdopterin biosynthesis MoaE protein
Molybdopterin biosynthesis MoaE protein {ECO:0000313|EMBL:AEN73317.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="R
qs_4_scaffold_222_27
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(27302..27583)
DNA (282bp) protein (94aa)
ThiamineS protein n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SGB7_RHOMR
sulfur carrier protein ThiS
ThiamineS protein {ECO:0000313|EMBL:AEN73318.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus SG
qs_4_scaffold_222_28
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(27580..28059)
DNA (480bp) protein (160aa)
anti-oxidant AhpCTSA family protein n=1 Tax=Salisaeta longa RepID=UPI0003B3CC6D
anti-oxidant AhpCTSA family protein
Antioxidant, AhpC/TSA family {ECO:0000313|EMBL:ABC46301.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter
qs_4_scaffold_222_29
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(28141..29367)
DNA (1227bp) protein (409aa)
permease n=1 Tax=Salisaeta longa RepID=UPI0003B5A142
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24637.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_4_scaffold_222_30
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

29626..31314
DNA (1689bp) protein (563aa)
1-pyrroline-5-carboxylate dehydrogenase {ECO:0000313|EMBL:ABC44349.1}; EC=1.2.1.88 {ECO:0000313|EMBL:ABC44349.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis
1-pyrroline-5-carboxylate dehydrogenase n=1 Tax=Salisaeta longa RepID=UPI0003B56D39
pruA; 1-pyrroline-5-carboxylate dehydrogenase
Displaying items 1-30 of 48 in total

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