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qs_4_scaffold_1036

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Displaying 18 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_4_scaffold_1036_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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190..708
DNA (519bp) protein (173aa)
Transposase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H523_SALRM
transposase
Transposase {ECO:0000313|EMBL:CBH23128.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (strain M8
qs_4_scaffold_1036_2
Galbibacter marinus, Galbibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(728..1624)
DNA (897bp) protein (299aa)
hypothetical protein n=1 Tax=Pontibacter roseus RepID=UPI00037C12FD
Uncharacterized protein {ECO:0000313|EMBL:EKF54412.1}; TaxID=555500 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Galbibacter.;" source="Galbibacter marinus.;"
hypothetical protein
qs_4_scaffold_1036_3
unknown

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comp(1994..2206)
DNA (213bp) protein (71aa)

This feature has no annotations

qs_4_scaffold_1036_4
Caldalkalibacillus thermarum, Caldalkalibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

2648..3415
DNA (768bp) protein (256aa)
3-ketoacyl-ACP reductase n=1 Tax=Salisaeta longa RepID=UPI0003B4A7DC
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EGL81359.1}; TaxID=986075 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Caldalkalibacillus.;" source="Caldalkalibacillus th
fabG; 3-oxoacyl-ACP reductase
qs_4_scaffold_1036_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

3836..4435
DNA (600bp) protein (200aa)
glycoprotease (M22) metalloprotease; K14742 hypothetical protease [EC:3.4.-.-] id=24659095 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
glycoprotease (M22) metalloprotease
Glycoprotease (M22) metalloprotease {ECO:0000313|EMBL:ABC43847.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salin
qs_4_scaffold_1036_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

4559..5422
DNA (864bp) protein (288aa)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H8A1_SALRM
accD; acetyl-coenzyme A carboxylase carboxyl transferase subunit beta
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395, ECO:0000313|EMBL:CBH24256.1}; Short=ACCase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395};; Short=Acet
qs_4_scaffold_1036_7
unknown

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5565..5708
DNA (144bp) protein (48aa)

This feature has no annotations

qs_4_scaffold_1036_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(5736..6845)
DNA (1110bp) protein (370aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B48F44
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH23989.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_4_scaffold_1036_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

7106..9142
DNA (2037bp) protein (679aa)
ABC transporter ATP-binding protein n=1 Tax=Salisaeta longa RepID=UPI0003B4092B
ABC transporter ATP-binding protein
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:CBH25948.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sali
qs_4_scaffold_1036_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

9248..10825
DNA (1578bp) protein (526aa)
magnesium chelatase subunit ChlI family protein; K03405 magnesium chelatase subunit I [EC:6.6.1.1] id=24658263 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Magnesium-chelatase subunit chlI {ECO:0000313|EMBL:CBH25466.1}; EC=6.6.1.1 {ECO:0000313|EMBL:CBH25466.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodot
chlI; Magnesium-chelatase subunit chlI
qs_4_scaffold_1036_11
unknown

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comp(10911..11216)
DNA (306bp) protein (102aa)

This feature has no annotations

qs_4_scaffold_1036_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

11326..12126
DNA (801bp) protein (267aa)
glycosyl transferase family protein; K00754 [EC:2.4.1.-] id=24658261 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Glycosyl transferase, group 2 family protein {ECO:0000313|EMBL:ABC45251.1}; EC=2.4.1.- {ECO:0000313|EMBL:ABC45251.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae s
glycosyl transferase family protein
qs_4_scaffold_1036_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

12207..13196
DNA (990bp) protein (330aa)
Branched-chain amino acid aminotransferase {ECO:0000313|EMBL:ABC43810.1}; EC=2.6.1.42 {ECO:0000313|EMBL:ABC43810.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae se
branched-chain amino acid aminotransferase n=1 Tax=Salisaeta longa RepID=UPI0003B35C5E
ilvE; branched-chain amino acid aminotransferase
qs_4_scaffold_1036_14
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

13235..13459
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SL62_RHOMR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN74579.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus mari
qs_4_scaffold_1036_15
Hymenobacter sp. APR13, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(13484..13981)
DNA (498bp) protein (166aa)
Pyridoxine/pyridoxamine 5'-phosphate oxidase {ECO:0000256|HAMAP-Rule:MF_01629}; EC=1.4.3.5 {ECO:0000256|HAMAP-Rule:MF_01629};; PNP/PMP oxidase {ECO:0000256|HAMAP-Rule:MF_01629}; Pyridoxal 5'-phosphate
hypothetical protein n=1 Tax=Hymenobacter aerophilus RepID=UPI000381C725
hypothetical protein
qs_4_scaffold_1036_16
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(14027..15181)
DNA (1155bp) protein (385aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae;
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SL54_RHOMR
integral membrane sensor signal transduction histidine kinase
qs_4_scaffold_1036_17
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(15250..15999)
DNA (750bp) protein (250aa)
PhoP family transcriptional regulator n=1 Tax=Salisaeta longa RepID=UPI0003B540E5
winged helix family two component transcriptional regulator
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ACY49543.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhod
qs_4_scaffold_1036_18
Aeromonas veronii, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16310..16951
DNA (642bp) protein (214aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002ECDC1A
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:EKB20542.1}; TaxID=1073385 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" s
GAF sensor-containing diguanylate cyclase
Displaying 18 items

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