ggKbase home page

qs_6_scaffold_1244

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_6_scaffold_1244_1
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1..192)
DNA (192bp) protein (64aa)
Monooxygenase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0D1G1_9EURY
Monooxygenase {ECO:0000313|EMBL:ELZ27984.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum JCM 14848.;
monooxygenase
qs_6_scaffold_1244_2
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(403..1485)
DNA (1083bp) protein (361aa)
Oxidoreductase domain-containing protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CXM3_9EURY
Oxidoreductase domain-containing protein {ECO:0000313|EMBL:ELZ27971.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeome
oxidoreductase domain-containing protein
qs_6_scaffold_1244_3
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1621..2859)
DNA (1239bp) protein (413aa)
Mandelate racemase/muconate lactonizing protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NX93_HALMD
mandelate racemase/muconate lactonizing protein
Mandelate racemase/muconate lactonizing protein {ECO:0000313|EMBL:ACV46458.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="H
qs_6_scaffold_1244_4
unknown

Not on your lists

comp(3096..3275)
DNA (180bp) protein (60aa)

This feature has no annotations

qs_6_scaffold_1244_5
Halostagnicola sp. A56, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3460..4155
DNA (696bp) protein (232aa)
D-3-phosphoglycerate dehydrogenase n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JGC5_HALVA
Uncharacterized protein {ECO:0000313|EMBL:KDE60558.1}; TaxID=1495067 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola sp. A56.;"
3-phosphoglycerate dehydrogenase
qs_6_scaffold_1244_6
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4383..5198)
DNA (816bp) protein (272aa)
Xylose isomerase domain protein TIM barrel n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2S1F8_HALTV
xylose isomerase
Xylose isomerase domain protein TIM barrel {ECO:0000313|EMBL:ADB63205.1}; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigen
qs_6_scaffold_1244_7
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5370..6518)
DNA (1149bp) protein (383aa)
ABC transporter n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0D1F0_9EURY
ABC transporter {ECO:0000313|EMBL:ELZ27974.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum JCM 14848
sugar ABC transporter ATP-binding protein
qs_6_scaffold_1244_8
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6603..7520)
DNA (918bp) protein (306aa)
Binding-protein-dependent transporters inner membrane component n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CXN7_9EURY
Binding-protein-dependent transporters inner membrane component {ECO:0000313|EMBL:ELZ27975.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometric
binding-protein-dependent transporters inner membrane component
qs_6_scaffold_1244_9
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7520..8443)
DNA (924bp) protein (308aa)
Binding-protein-dependent transporters inner membrane component n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CXM9_9EURY
Binding-protein-dependent transporters inner membrane component {ECO:0000313|EMBL:ELZ27976.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometric
binding-protein-dependent transporters inner membrane component
qs_6_scaffold_1244_10
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8535..9986)
DNA (1452bp) protein (484aa)
Extracellular solute-binding protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CZY6_9EURY
Extracellular solute-binding protein {ECO:0000313|EMBL:ELZ27977.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometric
extracellular solute-binding protein
qs_6_scaffold_1244_11
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10615..11400
DNA (786bp) protein (262aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CXP3_9EURY
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ELZ27980.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeomet
short-chain dehydrogenase/reductase SDR
qs_6_scaffold_1244_12
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11576..12379
DNA (804bp) protein (268aa)
Aldo/keto reductase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CXN5_9EURY
Aldo/keto reductase {ECO:0000313|EMBL:ELZ27981.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum JCM 1
aldo/keto reductase
qs_6_scaffold_1244_13
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12453..13607
DNA (1155bp) protein (385aa)
Alcohol dehydrogenase GroES n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CZZ1_9EURY
Alcohol dehydrogenase GroES {ECO:0000313|EMBL:ELZ27982.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallid
alcohol dehydrogenase GroES
qs_6_scaffold_1244_14
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13805..14605
DNA (801bp) protein (267aa)
HpcH/HpaI aldolase n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NX95_HALMD
HpcH/HpaI aldolase
HpcH/HpaI aldolase {ECO:0000313|EMBL:ACV46460.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei (stra
Displaying 14 items

View Taxonomy