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qs_6_scaffold_181

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_6_scaffold_181_1
Halorhodospira halochloris, Halorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..568)
DNA (567bp) protein (189aa)
MFS transporter n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI0003759621
MFS transporter
MFS transporter {ECO:0000313|EMBL:AHK77970.1}; TaxID=1354791 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Halorhodospira.;" source="Halorhodospira halo
qs_6_scaffold_181_2
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(734..2929)
DNA (2196bp) protein (732aa)
Rhamnulose-1-phosphate aldolase/alcohol dehydrogenase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MFR5_RHOM4
rhamnulose-1-phosphate aldolase/alcohol dehydrogenase
Rhamnulose-1-phosphate aldolase/alcohol dehydrogenase {ECO:0000313|EMBL:ACY47592.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermu
qs_6_scaffold_181_3
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(3024..4448)
DNA (1425bp) protein (475aa)
Rhamnulokinase {ECO:0000313|EMBL:AEN74091.1}; EC=2.7.1.5 {ECO:0000313|EMBL:AEN74091.1};; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodoth
Carbohydrate kinase FGGY n=2 Tax=Rhodothermus marinus RepID=D0MFR4_RHOM4
carbohydrate kinase FGGY
qs_6_scaffold_181_4
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(4496..5779)
DNA (1284bp) protein (428aa)
Xylose isomerase domain protein TIM barrel n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MFR3_RHOM4
xylose isomerase domain-containing protein
Xylose isomerase domain protein TIM barrel {ECO:0000313|EMBL:ACY47590.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source
qs_6_scaffold_181_5
RLO_RIF05_58_11, RIF5, Bacteria

Not on your lists

comp(5824..6867)
DNA (1044bp) protein (348aa)
methionine synthase (B12-independent) (EC:2.1.1.14); K00549 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] Tax=RIFCSPLOWO2_12_FULL_RIF05_58_11_curated
methionine synthase (B12-independent) (EC:2.1.1.14)
hypothetical protein n=1 Tax=unclassified candidate division EM 19 RepID=UPI000361F139
qs_6_scaffold_181_6
bacterium UASB270, Bacteria

Not on your lists

comp(6929..7699)
DNA (771bp) protein (257aa)
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:GAK57535.1}; TaxID=1499967 species="Bacteria.;" source="bacterium UASB270.;"
Short-chain dehydrogenase/reductase SDR id=4194005 bin=GWF2_Lentisphaerae_49_21 species=Cyclobacterium marinum genus=Cyclobacterium taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
short-chain dehydrogenase/reductase SDR
qs_6_scaffold_181_7
RLO_Verrucomicrobia_64_8, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(7759..8940)
DNA (1182bp) protein (394aa)
Oxidoreductase domain protein n=1 Tax=Cyclobacterium marinum (strain ATCC 25205 / DSM 745) RepID=G0J7Y4_CYCMS
oxidoreductase domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated
oxidoreductase domain-containing protein
qs_6_scaffold_181_8
bacterium UASB270, Bacteria

Not on your lists

comp(9020..9478)
DNA (459bp) protein (153aa)
cupin n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036978DA
Cupin 2, conserved barrel domain protein {ECO:0000313|EMBL:GAK57533.1}; TaxID=1499967 species="Bacteria.;" source="bacterium UASB270.;"
cupin
qs_6_scaffold_181_9
Rhodopirellula sallentina, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(9475..10872)
DNA (1398bp) protein (466aa)
Glycosyl hydrolase, family 88 n=1 Tax=Rhodopirellula sallentina SM41 RepID=M5UHX5_9PLAN
Glycosyl hydrolase, family 88 {ECO:0000313|EMBL:EMI55623.1}; TaxID=1263870 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirell
glycosyl hydrolase family protein
qs_6_scaffold_181_10
RLO_PLX_64_10, Bacteria

Not on your lists

comp(10929..11744)
DNA (816bp) protein (272aa)
hypothetical protein n=1 Tax=Armatimonadetes bacterium JGI 0000077-K19 RepID=UPI0003B59422
phytanoyl-CoA dioxygenase Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
phytanoyl-CoA dioxygenase
qs_6_scaffold_181_11
Verrucomicrobiae bacterium DG1235, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(11771..13609)
DNA (1839bp) protein (613aa)
Putative uncharacterized protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JCP8_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:EDY83106.1}; TaxID=382464 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales.;" source="Verrucomicrobiae bacterium DG1235.;"
hypothetical protein
qs_6_scaffold_181_12
Verrucomicrobiae bacterium DG1235, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(13596..14624)
DNA (1029bp) protein (343aa)
BNR/Asp-box repeat domain protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JCP7_9BACT
BNR/Asp-box repeat domain protein {ECO:0000313|EMBL:EDY83628.1}; TaxID=382464 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales.;" source="Verrucomicrobiae bacterium DG1235.;"
glycosyl hydrolase BNR repeat-containing glycosyl hydrolase
qs_6_scaffold_181_13
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(14626..16425)
DNA (1800bp) protein (600aa)
Uncharacterized protein n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZY38_OPITP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB76187.1}; Flags: Precursor;; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strai
qs_6_scaffold_181_14
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16460..17506)
DNA (1047bp) protein (349aa)
oxidoreductase domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
Oxidoreductase, NAD-binding domain protein id=4814656 bin=GWC2_Syntrophus__56_31 species=Desulfitobacterium hafniense genus=Desulfitobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein containing oxidoreductase-domain
qs_6_scaffold_181_15
Verrucomicrobiae bacterium DG1235, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(17503..18354)
DNA (852bp) protein (284aa)
AP endonuclease, family 2 n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JCR4_9BACT
AP endonuclease, family 2 {ECO:0000313|EMBL:EDY84771.1}; TaxID=382464 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales.;" source="Verrucomicrobiae bacterium DG1235.;"
xylose isomerase domain-containing protein
qs_6_scaffold_181_16
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(18364..19722)
DNA (1359bp) protein (453aa)
sugar ABC transporter periplasmic protein; K02027 multiple sugar transport system substrate-binding protein Tax=RBG_16_Ignavibacteria_34_14_curated
sugar ABC transporter periplasmic protein
sugar binding protein id=4827572 bin=GWA2_Ignavibacteriae_55_25 species=Thermococcus zilligii genus=Thermococcus taxon_order=Thermococcales taxon_class=Thermococci phylum=Euryarchaeota tax=GWA2_Ignavibacteriae_55_25 organism_group=Ignavibacteria
qs_6_scaffold_181_17
Defluviitoga tunisiensis, Defluviitoga, Petrotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

comp(19751..20707)
DNA (957bp) protein (319aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) RepID=D7BAU3_MEISD
Sugar ABC transporter, permease protein {ECO:0000313|EMBL:CEP77889.1}; TaxID=1006576 species="Bacteria; Thermotogae; Petrotogales; Petrotogaceae; Defluviitoga.;" source="Defluviitoga tunisiensis.;"
binding-protein-dependent transport system inner membrane protein
qs_6_scaffold_181_18
unknown

Not on your lists

comp(20717..20962)
DNA (246bp) protein (82aa)

This feature has no annotations

qs_6_scaffold_181_19
Geobacillus sp. GHH01, Geobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(21272..22159)
DNA (888bp) protein (296aa)
Putative ABC transporter permease protein n=1 Tax=Geobacillus sp. GHH01 RepID=L7ZXV1_9BACI
putative ABC transporter permease protein
Putative ABC transporter permease protein {ECO:0000313|EMBL:AGE22475.1}; TaxID=1233873 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Geobacillus.;" source="Geobacillus sp. GHH01.;"
qs_6_scaffold_181_20
Verrucomicrobiae bacterium DG1235, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(22149..23726)
DNA (1578bp) protein (526aa)
hypothetical protein n=1 Tax=Aminicenantes bacterium SCGC AAA252-F08 RepID=UPI0003B2EF29
Putative uncharacterized protein {ECO:0000313|EMBL:EDY83105.1}; TaxID=382464 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales.;" source="Verrucomicrobiae bacterium DG1235.;"
hypothetical protein
qs_6_scaffold_181_21
RLO_PLX_64_10, Bacteria

Not on your lists

comp(23784..24851)
DNA (1068bp) protein (356aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
Putative uncharacterized protein id=4432125 bin=GWF2_Ignavibacteria_35_20 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
hypothetical protein
qs_6_scaffold_181_22
RLO_PLX_64_10, Bacteria

Not on your lists

comp(24889..27555)
DNA (2667bp) protein (889aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
Fibronectin, type III domain protein id=2294419 bin=GWB2_Elusimicrobia_63_16 species=Thermoplasmatales archaeon SCGC AB-539-N05 genus=unknown taxon_order=Thermoplasmatales taxon_class=Thermoplasmata phylum=Euryarchaeota tax=GWB2_Elusimicrobia_63_16 organism_group=Elusimicrobia
qs_6_scaffold_181_23
GWA2_Ignavibacteriae_55_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(27623..30646)
DNA (3024bp) protein (1008aa)
hypothetical protein n=1 Tax=Gracilimonas tropica RepID=UPI00036323AF
TonB-dependent receptor Tax=GWA2_Ignavibacteriae_55_25_curated
TonB-dependent receptor
qs_6_scaffold_181_24
Halobacteroides halobius, Halobacteroides, Halanaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30765..31532)
DNA (768bp) protein (256aa)
Transcriptional regulator n=1 Tax=Halobacteroides halobius (strain ATCC 35273 / DSM 5150 / MD-1) RepID=L0KBM8_HALHC
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AGB42406.1}; TaxID=748449 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halobacteroidaceae; Halobacteroides.;" source="Halobacteroides halobiu
qs_6_scaffold_181_25
R_Deltaproteobacteria_44_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31630..31944)
DNA (315bp) protein (105aa)
transposase Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_44_16_curated
Transposase id=4619782 bin=GWC2_Nitrospirae_57_13 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
hypothetical protein
qs_6_scaffold_181_26

Not on your lists

comp(32044..32631)
DNA (588bp) protein (196aa)
Marine sediment metagenome DNA, contig: S03H2_L03512 {ECO:0000313|EMBL:GAH42961.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
qs_6_scaffold_181_27
Desmospora sp. 8437, Desmospora, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(32707..33462)
DNA (756bp) protein (252aa)
integrase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C49BE
Cointegrate resolution protein S {ECO:0000313|EMBL:EGK13907.1}; TaxID=997346 species="Bacteria; Firmicutes; Bacilli; Bacillales; Thermoactinomycetaceae; Desmospora.;" source="Desmospora sp. 8437.;"
integrase family protein
qs_6_scaffold_181_28
unknown

Not on your lists

34468..35958
DNA (1491bp) protein (497aa)

This feature has no annotations

qs_6_scaffold_181_29
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

36238..37086
DNA (849bp) protein (283aa)
Putative Transposase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H525_SALRM
transposase
Putative Transposase {ECO:0000313|EMBL:CBH23130.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (
Displaying 29 items

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