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qs_6_scaffold_3941

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_6_scaffold_3941_1
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3..257)
DNA (255bp) protein (85aa)
Translation initiation factor 1A n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NCG6_9EURY
Translation initiation factor 1A {ECO:0000256|HAMAP-Rule:MF_00216}; Short=aIF-1A {ECO:0000256|HAMAP-Rule:MF_00216};; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halob
tif1A1; translation initiation factor aIF-1A
qs_6_scaffold_3941_2
Haloferax sp. Arc-Hr, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(396..1763)
DNA (1368bp) protein (456aa)
hypothetical protein n=1 Tax=Halomicrobium katesii RepID=UPI000360BBA2
Modification methylase PaeR7I {ECO:0000313|EMBL:CQR50079.1}; TaxID=1476858 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sp. Arc-Hr.;"
adenine-specific DNA methyltransferase
qs_6_scaffold_3941_3
Haloferax sp. Arc-Hr, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(1813..2553)
DNA (741bp) protein (247aa)
Type II site-specific deoxyribonuclease (EC:3.1.21.4)
hypothetical protein n=1 Tax=Halomicrobium katesii RepID=UPI00035F6601
Type-2 restriction enzyme PaeR7I {ECO:0000313|EMBL:CQR50078.1}; TaxID=1476858 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sp. Arc-Hr.;"
qs_6_scaffold_3941_4
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2675..2863
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NBC0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA55267.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qs_6_scaffold_3941_5
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3016..5019)
DNA (2004bp) protein (668aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0M9Q8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA42481.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
qs_6_scaffold_3941_6
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5465..5965
DNA (501bp) protein (167aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU0033
adk; adenylate kinase (EC:2.7.4.3)
Adenylate kinase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MCU3_9EURY
qs_6_scaffold_3941_7
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6081..7034
DNA (954bp) protein (318aa)
Adk/cmk cluster protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MAV7_9EURY
Adk/cmk cluster protein {ECO:0000313|EMBL:EMA42478.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
qs_6_scaffold_3941_8
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7111..7686
DNA (576bp) protein (192aa)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00239, ECO:0000256|SAAS:SAAS00054797}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00239};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00239, ECO:0000256|SAAS:SAAS0005
cmk; cytidylate kinase (EC:2.7.4.14)
Cytidylate kinase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0M9L0_9EURY
qs_6_scaffold_3941_9
Halonotius sp. J07HN6, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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7686..8474
DNA (789bp) protein (263aa)
Probable tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01081}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01081};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01081}; tRNA pseud
tRNA pseudouridine synthase B n=1 Tax=Halorubrum sp. T3 RepID=UPI00035CC935
H/ACA RNA-protein complex component Cbf5p
qs_6_scaffold_3941_10
unknown

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9283..9519
DNA (237bp) protein (79aa)

This feature has no annotations

qs_6_scaffold_3941_11
Halovivax ruber, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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9516..9842
DNA (327bp) protein (109aa)
PKD domain protein,LVIVD repeat protein n=1 Tax=Halovivax ruber (strain DSM 18193 / JCM 13892 / XH-70) RepID=L0IC06_HALRX
PKD domain protein,LVIVD repeat protein
PKD domain protein,LVIVD repeat protein {ECO:0000313|EMBL:AGB15766.1}; Flags: Precursor;; TaxID=797302 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halovivax.;" source="
qs_6_scaffold_3941_12
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(9844..10761)
DNA (918bp) protein (306aa)
Mechanosensitive ion channel protein MscS n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NBL8_9EURY
Mechanosensitive ion channel protein MscS {ECO:0000313|EMBL:EMA55261.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcu
mscS; mechanosensitive ion channel
Displaying 12 items

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