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qs_6_scaffold_554

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_6_scaffold_554_trna_1
unknown

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22..97
DNA (76bp)
transferRNA
qs_6_scaffold_554_1
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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816..1901
DNA (1086bp) protein (362aa)
Xylose dehydrogenase (NAD/NADP) n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MH44_HALMO
Xylose dehydrogenase (NAD/NADP) {ECO:0000313|EMBL:EMA45047.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae
xylose dehydrogenase
qs_6_scaffold_554_2
Thermaerobacter marianensis, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1968..3461)
DNA (1494bp) protein (498aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0TU69_9EURY
aldehyde dehydrogenase
Aldehyde Dehydrogenase {ECO:0000313|EMBL:ADU51904.1}; TaxID=644966 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source="Therm
qs_6_scaffold_554_3

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3602..4507
DNA (906bp) protein (302aa)
Dihydrodipicolinate synthase/N-acetylneuraminate lyase n=1 Tax=uncultured archaeon A07HR67 RepID=V4XVZ9_9ARCH
Dihydrodipicolinate synthase/N-acetylneuraminate lyase {ECO:0000313|EMBL:ESS04376.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
dihydrodipicolinate synthase/N-acetylneuraminate lyase
qs_6_scaffold_554_4
Halorubrum lipolyticum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(4602..7004)
DNA (2403bp) protein (801aa)
Alpha-glucosidase n=1 Tax=Halorubrum lipolyticum DSM 21995 RepID=M0NSD1_9EURY
Alpha-glucosidase {ECO:0000313|EMBL:EMA60681.1}; TaxID=1227482 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lipolyticum DSM 21995.;"
alpha-glucosidase
qs_6_scaffold_554_5

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comp(7242..8609)
DNA (1368bp) protein (456aa)
Trehalose/maltose binding protein (Fragment) n=1 Tax=Thermosipho africanus H17ap60334 RepID=K2PJ88_9THEM
Uncharacterized protein {ECO:0000313|EMBL:KKN94400.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
trehalose/maltose binding protein
qs_6_scaffold_554_6
Thermosediminibacter oceani, Thermosediminibacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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8764..9735
DNA (972bp) protein (324aa)
Carbohydrate ABC transporter membrane protein 1, CUT1 family n=1 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9RYQ5_THEOJ
carbohydrate ABC transporter membrane protein 1, CUT1 family
Carbohydrate ABC transporter membrane protein 1, CUT1 family {ECO:0000313|EMBL:ADL08479.1}; TaxID=555079 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Famil
qs_6_scaffold_554_7
Acidithrix ferrooxidans, Acidithrix, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

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9736..10602
DNA (867bp) protein (289aa)
ABC-type sugar transport system, permease component n=1 Tax=Halobacteroides halobius (strain ATCC 35273 / DSM 5150 / MD-1) RepID=L0KBM5_HALHC
Trehalose transport system permease protein SugB {ECO:0000313|EMBL:KJF16827.1}; TaxID=1280514 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Acidithrix.;" sour
ABC-type sugar transport system, permease component
qs_6_scaffold_554_8
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(10646..10921)
DNA (276bp) protein (92aa)
(R)-2-hydroxyacid dehydrogenase n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U2YGH3_9EURY
(R)-2-hydroxyacid dehydrogenase {ECO:0000313|EMBL:GAD53366.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum acidiphilum MH1-52-
qs_6_scaffold_554_9
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(11024..11992)
DNA (969bp) protein (323aa)
D-isomer specific 2-hydroxyacid dehydrogenase protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CZ89_9EURY
D-isomer specific 2-hydroxyacid dehydrogenase protein {ECO:0000313|EMBL:ELZ27948.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" sour
D-isomer specific 2-hydroxyacid dehydrogenase protein
qs_6_scaffold_554_10

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comp(12017..13273)
DNA (1257bp) protein (419aa)
L-alanine-DL-glutamate epimerase related enzymes of enolase superfamily n=1 Tax=uncultured archaeon A07HR67 RepID=V4ZP64_9ARCH
L-alanine-DL-glutamate epimerase related enzymes of enolase superfamily {ECO:0000313|EMBL:ESS04375.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
mandelate racemase/muconate lactonizing protein
qs_6_scaffold_554_11
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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13411..14673
DNA (1263bp) protein (421aa)
Sugar ABC transporter ATP-binding protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DAX3_9EURY
Sugar ABC transporter ATP-binding protein {ECO:0000313|EMBL:ELZ32635.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeom
sugar ABC transporter ATP-binding protein
qs_6_scaffold_554_12
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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14752..15543
DNA (792bp) protein (264aa)
Transcriptional regulator, IclR family n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8DD74_HALXS
IclR family transcriptional regulator
Transcriptional regulator, IclR family {ECO:0000313|EMBL:AEH38963.1}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger xanaduensi
Displaying 13 items

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