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qs_6_scaffold_8565

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_6_scaffold_8565_1
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2..469
DNA (468bp) protein (156aa)
truD; tRNA pseudouridine synthase D (EC:5.4.99.12)
Probable tRNA pseudouridine synthase D {ECO:0000255|HAMAP-Rule:MF_01082}; EC=5.4.99.27 {ECO:0000255|HAMAP-Rule:MF_01082};; tRNA pseudouridine(13) synthase {ECO:0000255|HAMAP-Rule:MF_01082}; tRNA pseud
Probable tRNA pseudouridine synthase D n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=TRUD_NATPD
qs_6_scaffold_8565_2
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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722..1378
DNA (657bp) protein (219aa)
Type 11 methyltransferase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D5U2_9EURY
Type 11 methyltransferase {ECO:0000313|EMBL:ELZ29499.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense
hypothetical protein
qs_6_scaffold_8565_3
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1832..2005
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XKK8_NATM8
hypothetical protein
DUF2103 family protein {ECO:0000313|EMBL:CCQ36078.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (s
qs_6_scaffold_8565_4
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(2002..2346)
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LH99_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA31809.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisalsi AJ5.;"
hypothetical protein
qs_6_scaffold_8565_5
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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2390..2653
DNA (264bp) protein (88aa)
50S ribosomal protein L37Ae n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8DBN1_HALXS
ribosomal L37ae protein
50S ribosomal protein L37Ae {ECO:0000256|HAMAP-Rule:MF_00327}; Ribosomal protein L43e {ECO:0000256|HAMAP-Rule:MF_00327}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natri
qs_6_scaffold_8565_6
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2657..2791
DNA (135bp) protein (45aa)
rpoP; DNA-directed RNA polymerase subunit P (EC:2.7.7.6)
DNA-directed RNA polymerase subunit P {ECO:0000256|HAMAP-Rule:MF_00615}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00615};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal
DNA-directed RNA polymerase subunit P n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XPW7_NATM8
qs_6_scaffold_8565_7
Halorubrum lipolyticum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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2805..3068
DNA (264bp) protein (88aa)
Rpo operon protein n=1 Tax=Halorubrum lipolyticum DSM 21995 RepID=M0NXJ6_9EURY
Rpo operon protein {ECO:0000313|EMBL:EMA61979.1}; TaxID=1227482 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lipolyticum DSM 21995.;"
rpo operon protein
qs_6_scaffold_8565_8
unknown

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comp(3190..3648)
DNA (459bp) protein (153aa)

This feature has no annotations

qs_6_scaffold_8565_9
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3743..3946)
DNA (204bp) protein (68aa)
transcription factor TFIIB cyclin-related; K03124 transcription initiation factor TFIIB id=24615146 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal
transcription factor TFIIB cyclin-related
Displaying 9 items

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