ggKbase home page

qs_8_scaffold_117

Search features with annotation key words

Displaying 27 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_8_scaffold_117_1
unknown

Not on your lists

comp(2..130)
DNA (129bp) protein (43aa)

This feature has no annotations

qs_8_scaffold_117_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(304..1416)
DNA (1113bp) protein (371aa)
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incert
GTPase RsgA n=1 Tax=Salisaeta longa RepID=UPI0003B62181
rsgA; ribosome-associated GTPase
qs_8_scaffold_117_3
unknown

Not on your lists

1531..1881
DNA (351bp) protein (117aa)

This feature has no annotations

qs_8_scaffold_117_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

1959..2231
DNA (273bp) protein (91aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B54A32
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC44427.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_8_scaffold_117_5
Lyngbya confervoides, Lyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

2442..2903
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Leptolyngbya sp. PCC 6406 RepID=L8LFR4_9CYAN
Uncharacterized protein {ECO:0000313|EMBL:KIF38771.1}; TaxID=1574623 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Lyngbya.;" source="Lyngbya confervoides BDU141951.;"
hypothetical protein
qs_8_scaffold_117_6
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(2943..5492)
DNA (2550bp) protein (850aa)
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174};; ATP-dependent protease La {ECO:0000256|HA
anti-sigma H sporulation factor LonB (EC:3.4.21.53)
Lon protease n=1 Tax=Salisaeta longa RepID=UPI0003B744E4
qs_8_scaffold_117_7
unknown

Not on your lists

6132..6656
DNA (525bp) protein (175aa)

This feature has no annotations

qs_8_scaffold_117_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(6682..8256)
DNA (1575bp) protein (525aa)
Signal transduction histidine kinase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H866_SALRM
signal transduction histidine kinase
Signal transduction histidine kinase {ECO:0000313|EMBL:CBH24221.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sali
qs_8_scaffold_117_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

8445..9887
DNA (1443bp) protein (481aa)
Cystathionine beta-synthase {ECO:0000313|EMBL:CBH24222.1}; EC=4.2.1.22 {ECO:0000313|EMBL:CBH24222.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodotherm
Cystathionine beta-synthase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H867_SALRM
cysK; cystathionine beta-synthase
qs_8_scaffold_117_10
Hymenobacter sp. APR13, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

10031..10423
DNA (393bp) protein (131aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B459BB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AII52560.1}; TaxID=1356852 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter sp. APR13.;"
qs_8_scaffold_117_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(10509..11621)
DNA (1113bp) protein (371aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H869_SALRM
hypothetical protein
Membrane protein, putative {ECO:0000313|EMBL:ABC43850.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter r
qs_8_scaffold_117_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

11931..13130
DNA (1200bp) protein (400aa)
Succinyl-CoA ligase [ADP-forming] subunit beta {ECO:0000255|HAMAP-Rule:MF_00558}; EC=6.2.1.5 {ECO:0000255|HAMAP-Rule:MF_00558};; Succinyl-CoA synthetase subunit beta {ECO:0000255|HAMAP-Rule:MF_00558};
malate--CoA ligase subunit beta n=1 Tax=Salisaeta longa RepID=UPI0003B7749F
succinyl-CoA synthetase beta chain
qs_8_scaffold_117_13
unknown

Not on your lists

comp(13173..13541)
DNA (369bp) protein (123aa)

This feature has no annotations

qs_8_scaffold_117_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(13756..16788)
DNA (3033bp) protein (1011aa)
hypothetical protein
hypothetical protein id=24657656 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:ABC44616.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_8_scaffold_117_15
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

17113..19146
DNA (2034bp) protein (678aa)
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000256|PIRNR:PIRNR000732}; EC=2.7.3.9 {ECO:0000256|PIRNR:PIRNR000732};; Phosphotransferase system, enzyme I {ECO:0000256|PIRNR:PIRNR000732}; TaxID=
Phosphoenolpyruvate-protein phosphotransferase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MI19_RHOM4
phosphoenolpyruvate-protein phosphotransferase
qs_8_scaffold_117_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(19233..20312)
DNA (1080bp) protein (360aa)
MoxR-like transcriptional regulator protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HA78_SALRM
moxR; moxR-like transcriptional regulator protein
MoxR-like transcriptional regulator protein {ECO:0000313|EMBL:CBH24933.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" sourc
qs_8_scaffold_117_17
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(20482..21879)
DNA (1398bp) protein (466aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; Flags: Precursor;; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incerta
PpiC-type peptidyl-prolyl cis-trans isomerase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SF35_RHOMR
PpiC-type peptidyl-prolyl cis-trans isomerase
qs_8_scaffold_117_18
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

22351..23856
DNA (1506bp) protein (502aa)
Glutamate--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000255|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00022}; Short=GluRS {ECO:0000255|HAMAP-Rul
glutamyl-tRNA synthetase n=1 Tax=Salisaeta longa RepID=UPI0003B65080
gltX; glutamyl-tRNA synthetase
qs_8_scaffold_117_19
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(23877..25448)
DNA (1572bp) protein (524aa)
Glycerol-3-phosphate dehydrogenase, anaerobic {ECO:0000313|EMBL:ABC44790.1}; EC=1.1.5.3 {ECO:0000313|EMBL:ABC44790.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae
Glycerol-3-phosphate dehydrogenase, anaerobic n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S2J4_SALRD
glpA; glycerol-3-phosphate dehydrogenase
qs_8_scaffold_117_20
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(25503..27023)
DNA (1521bp) protein (507aa)
Glycerol kinase {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376}; EC=2.7.1.30 {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376};; ATP:glycerol 3-phosphotransferase {ECO:
Glycerol kinase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H980_SALRM
glpK; glycerol kinase
qs_8_scaffold_117_21
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(27259..29709)
DNA (2451bp) protein (817aa)
Glutamine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00126, ECO:0000256|SAAS:SAAS00016670}; EC=6.1.1.18 {ECO:0000256|HAMAP-Rule:MF_00126, ECO:0000256|SAAS:SAAS00023088};; Glutaminyl-tRNA synthetase {ECO:
Glutamine--tRNA ligase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HA73_SALRM
glnS; glutaminyl-tRNA synthetase
qs_8_scaffold_117_22
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(29764..30834)
DNA (1071bp) protein (357aa)
ArgK-probable family n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HA71_SALRM
ArgK family protein
ArgK-probable family {ECO:0000313|EMBL:CBH24926.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (
qs_8_scaffold_117_23
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(31022..31777)
DNA (756bp) protein (252aa)
ABC transporter ATP-binding protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HC64_SALRM
ABC transporter ATP-binding protein
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CBH25619.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salin
qs_8_scaffold_117_24
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(31850..33196)
DNA (1347bp) protein (449aa)
pyrimidine-nucleoside phosphorylase (EC:2.4.2.4) rbh
Pyrimidine-nucleoside phosphorylase {ECO:0000313|EMBL:AEN72023.1}; EC=2.4.2.4 {ECO:0000313|EMBL:AEN72023.1};; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rho
Pyrimidine-nucleoside phosphorylase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SE31_RHOMR
qs_8_scaffold_117_25
BJP_IG2158_Anaerolineales_38_74, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(33304..34314)
DNA (1011bp) protein (337aa)
Abortive infection protein n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AZU7_RUBXD
abortive infection protein
Tax=BJP_IG2158_Anaerolineales_38_74
qs_8_scaffold_117_26
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(34500..34715)
DNA (216bp) protein (72aa)
50S ribosomal protein L31 n=1 Tax=Salisaeta longa RepID=UPI0003B38F52
rpmE; 50S ribosomal protein L31
50S ribosomal protein L31 {ECO:0000255|HAMAP-Rule:MF_00501}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacte
qs_8_scaffold_117_27
CG_Delta_05, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34827..35303)
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) RepID=C5A3E9_THEGJ
hypothetical protein Tax=CG_Delta_05
hypothetical protein
Displaying 27 items

View Taxonomy