ggKbase home page
Advanced Search
Search Help

QS_8_Bacteroidetes_Order_II__Incertae_sedis_68_43

In projects: QS_8

Consensus taxonomy: Bacteroidetes Order II. Incertae sedis  →  Bacteroidetes  →  Bacteria

Taxonomy override: Bacteroidetes

Metagenomic Context

Parent: QS_8_UNK

Properties

Avg. coverage: 42.56 Longest contig: 84.41 Kbp Bin length: 1.97 Mbp GC content: 67.51 %
Contigs count: 110 Features count: 1735 rRNAs count: 0 tRNAs count: 18

Genome completeness

near complete RP 46 / 55 MC: 1 BSCG 48 / 51 MC: 2 ASCG 11 / 38 MC: 1
Displaying items 1-50 of 110 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qs_8_scaffold_142
Order: Bacteroidetes Order II. Incertae sedis (54.41%)
68 84410 bp 67.90 42.05 85.45
qs_8_scaffold_233
Species: Salinibacter ruber (52.73%)
55 57633 bp 67.80 44.52 83.24
qs_8_scaffold_769
Order: Bacteroidetes Order II. Incertae sedis (66.67%)
48 61495 bp 66.88 41.83 84.85
qs_8_scaffold_336
Order: Bacteroidetes Order II. Incertae sedis (72.34%)
47 64120 bp 68.45 44.09 84.25
qs_8_scaffold_405
Order: Bacteroidetes Order II. Incertae sedis (67.5%)
40 46315 bp 67.05 42.68 81.93
qs_8_scaffold_655
Order: Bacteroidetes Order II. Incertae sedis (66.67%)
39 38479 bp 67.44 42.07 85.30
qs_8_scaffold_719
Order: Bacteroidetes Order II. Incertae sedis (51.43%)
35 33467 bp 66.84 41.47 78.64
qs_8_scaffold_152
Order: Bacteroidetes Order II. Incertae sedis (82.86%)
35 29923 bp 65.09 43.55 83.94
qs_8_scaffold_52
Species: Rhodothermus marinus (54.55%)
33 43999 bp 67.85 40.98 86.29
qs_8_scaffold_288
Order: Bacteroidetes Order II. Incertae sedis (66.67%)
33 38126 bp 69.00 44.31 88.84
qs_8_scaffold_679
Order: Bacteroidetes Order II. Incertae sedis (53.13%)
32 40583 bp 68.28 43.94 88.08
qs_8_scaffold_409
Species: Salinibacter ruber (60%)
30 29529 bp 66.88 42.43 82.34
qs_8_scaffold_457
Order: Bacteroidetes Order II. Incertae sedis (66.67%)
30 36512 bp 67.02 39.92 84.27
qs_8_scaffold_800
Order: Bacteroidetes Order II. Incertae sedis (62.07%)
29 24775 bp 67.14 41.21 88.43
qs_8_scaffold_960
Order: Bacteroidetes Order II. Incertae sedis (57.14%)
28 26965 bp 68.33 44.13 83.88
qs_8_scaffold_355
Order: Bacteroidetes Order II. Incertae sedis (59.26%)
27 28860 bp 66.94 41.12 86.27
qs_8_scaffold_116
Species: Salinibacter ruber (51.85%)
27 32530 bp 67.28 40.92 84.99
qs_8_scaffold_117
Species: Salinibacter ruber (55.56%)
27 35482 bp 67.65 41.29 87.28
qs_8_scaffold_365
Order: Bacteroidetes Order II. Incertae sedis (52%)
25 29926 bp 67.60 43.57 87.53
qs_8_scaffold_587
Order: Bacteroidetes Order II. Incertae sedis (62.5%)
24 32247 bp 67.56 42.35 86.38
qs_8_scaffold_492
Order: Bacteroidetes Order II. Incertae sedis (82.61%)
23 24223 bp 67.58 43.27 83.48
qs_8_scaffold_1234
Species: Salinibacter ruber (52.17%)
23 23541 bp 66.76 43.33 79.36
qs_8_scaffold_889
Order: Bacteroidetes Order II. Incertae sedis (63.64%)
22 26570 bp 67.54 44.61 79.69
qs_8_scaffold_407
Order: Bacteroidetes Order II. Incertae sedis (68.18%)
22 29612 bp 67.36 43.97 86.19
qs_8_scaffold_680
Species: Salinibacter ruber (66.67%)
21 26625 bp 68.75 42.10 88.18
qs_8_scaffold_206
Order: Bacteroidetes Order II. Incertae sedis (71.43%)
21 26162 bp 67.36 42.66 87.23
qs_8_scaffold_970
Order: Bacteroidetes Order II. Incertae sedis (50%)
20 18089 bp 68.07 43.93 83.12
qs_8_scaffold_589
Species: Salinibacter ruber (50%)
20 17202 bp 67.64 42.88 78.46
qs_8_scaffold_654
Species: Salinibacter ruber (50%)
20 29192 bp 67.42 42.21 90.20
qs_8_scaffold_701
Order: Bacteroidetes Order II. Incertae sedis (55%)
20 20657 bp 67.19 44.15 83.52
qs_8_scaffold_400
Species: Salinibacter ruber (55%)
20 21011 bp 66.56 41.50 87.70
qs_8_scaffold_234
Order: Bacteroidetes Order II. Incertae sedis (50%)
20 25048 bp 66.65 42.12 77.90
qs_8_scaffold_562
Species: Salinibacter ruber (57.89%)
19 17104 bp 67.90 40.09 84.40
qs_8_scaffold_383
Species: Salinibacter ruber (52.63%)
19 22573 bp 68.34 42.13 83.48
qs_8_scaffold_990
Species: Salinibacter ruber (52.63%)
19 20858 bp 65.39 41.11 86.58
qs_8_scaffold_375
Order: Bacteroidetes Order II. Incertae sedis (61.11%)
18 20189 bp 66.63 40.48 82.22
qs_8_scaffold_1038
Species: Salinibacter ruber (61.11%)
18 23090 bp 66.18 43.26 85.52
qs_8_scaffold_428
Order: Bacteroidetes Order II. Incertae sedis (50%)
18 27652 bp 68.65 43.41 81.43
qs_8_scaffold_826
Order: Bacteroidetes Order II. Incertae sedis (61.11%)
18 18478 bp 67.26 44.33 80.12
qs_8_scaffold_1096
Order: Bacteroidetes Order II. Incertae sedis (50%)
18 23307 bp 67.34 41.28 88.72
qs_8_scaffold_1356
Order: Bacteroidetes Order II. Incertae sedis (58.82%)
17 16693 bp 68.18 45.81 83.80
qs_8_scaffold_1710
Order: Bacteroidetes Order II. Incertae sedis (76.47%)
17 17051 bp 67.78 42.50 75.63
qs_8_scaffold_508
Species: Salinibacter ruber (70.59%)
17 19682 bp 68.11 44.35 81.78
qs_8_scaffold_1574
Order: Bacteroidetes Order II. Incertae sedis (58.82%)
17 18892 bp 67.92 43.02 86.01
qs_8_scaffold_1129
Order: Bacteroidetes Order II. Incertae sedis (56.25%)
16 17956 bp 66.66 40.41 86.65
qs_8_scaffold_1865
Species: Salinibacter ruber (56.25%)
16 15356 bp 67.75 42.75 84.69
qs_8_scaffold_1847
Order: Bacteroidetes Order II. Incertae sedis (60%)
15 16639 bp 68.46 41.17 88.04
qs_8_scaffold_750
Order: Bacteroidetes Order II. Incertae sedis (66.67%)
15 14205 bp 68.53 40.42 86.78
qs_8_scaffold_1021
Order: Bacteroidetes Order II. Incertae sedis (64.29%)
14 13236 bp 68.91 41.80 86.54
qs_8_scaffold_372
Species: Rhodothermus marinus (50%)
14 22486 bp 69.21 40.19 84.84
Displaying items 1-50 of 110 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.