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qs_8_scaffold_233

Search features with annotation key words

Displaying items 1-30 of 55 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_8_scaffold_233_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

1..1005
DNA (1005bp) protein (335aa)
fmt; methionyl-tRNA formyltransferase; K00604 methionyl-tRNA formyltransferase [EC:2.1.2.9] id=24658112 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043681}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=761659 species="B
fmt; methionyl-tRNA formyltransferase
qs_8_scaffold_233_2
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

1236..2024
DNA (789bp) protein (263aa)
enoyl-CoA hydratase n=1 Tax=Salisaeta longa RepID=UPI0003B35379
enoyl-CoA hydratase/isomerase
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:AEN72607.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermu
qs_8_scaffold_233_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

2420..4474
DNA (2055bp) protein (685aa)
ABC transporter, ATP-binding/permease protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HBA2_SALRM
ABC transporter ATP-binding protein
ABC transporter, ATP-binding/permease protein {ECO:0000313|EMBL:CBH25307.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" sou
qs_8_scaffold_233_4
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

4710..5666
DNA (957bp) protein (319aa)
Ribonuclease Z {ECO:0000256|HAMAP-Rule:MF_01818}; Short=RNase Z {ECO:0000256|HAMAP-Rule:MF_01818};; EC=3.1.26.11 {ECO:0000256|HAMAP-Rule:MF_01818};; tRNA 3 endonuclease {ECO:0000256|HAMAP-Rule:MF_0181
Ribonuclease Z n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0ME97_RHOM4
ribonuclease Z rbh
qs_8_scaffold_233_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(5687..6205)
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H4J6_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH22951.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_8_scaffold_233_6
unknown

Not on your lists

6215..6547
DNA (333bp) protein (111aa)

This feature has no annotations

qs_8_scaffold_233_7
unknown

Not on your lists

comp(6725..6982)
DNA (258bp) protein (86aa)

This feature has no annotations

qs_8_scaffold_233_trna_1
unknown

Not on your lists

comp(7044..7131)
DNA (88bp)
transferRNA
qs_8_scaffold_233_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(7261..7443)
DNA (183bp) protein (61aa)
frr; ribosome recycling factor
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=761659 species="Bacteria;
frr; ribosome recycling factor; K02838 ribosome recycling factor id=24656841 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
qs_8_scaffold_233_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(7905..8921)
DNA (1017bp) protein (339aa)
pyrH; uridylate kinase; K09903 uridylate kinase [EC:2.7.4.22] id=24656842 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uridylate kinase {ECO:0000255|HAMAP-Rule:MF_01220}; Short=UK {ECO:0000255|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000255|HAMAP-Rule:MF_01220};; Uridine monophosphate kinase {ECO:0000255|HAMAP-Rule:MF
pyrH; uridylate kinase
qs_8_scaffold_233_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(8961..9344)
DNA (384bp) protein (128aa)
Elongation factor Ts n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H4J9_SALRM
tsf; elongation factor Ts
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Orde
qs_8_scaffold_233_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(9862..10998)
DNA (1137bp) protein (379aa)
30S ribosomal protein S2 n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H4K0_SALRM
rpsB; 30S ribosomal protein S2
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291, ECO:0000313|EMBL:CBH22955.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinib
qs_8_scaffold_233_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(11237..11626)
DNA (390bp) protein (130aa)
30S ribosomal protein S9 n=2 Tax=Salinibacter ruber RepID=D5H4K1_SALRM
rpsI; 30S ribosomal protein S9
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003816}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salin
qs_8_scaffold_233_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(11744..12193)
DNA (450bp) protein (150aa)
50S ribosomal protein L13 n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H4K2_SALRM
rplM; 50S ribosomal protein L13
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|SAAS:SAAS00083943}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Sali
qs_8_scaffold_233_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

12455..13162
DNA (708bp) protein (236aa)
RNA polymerase sigma-70 factor
RNA polymerase sigma-70 factor id=24656815 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
RNA polymerase sigma-70 factor, putative {ECO:0000313|EMBL:ABC45273.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="
qs_8_scaffold_233_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

13247..14389
DNA (1143bp) protein (381aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B2FF6F
hypothetical protein
Tetratricopeptide repeat family protein {ECO:0000313|EMBL:ABC45722.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="S
qs_8_scaffold_233_16
Deinococcus peraridilitoris, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(14505..15890)
DNA (1386bp) protein (462aa)
Zn-dependent hydrolase, glyoxylase n=1 Tax=Deinococcus peraridilitoris (strain DSM 19664 / LMG 22246 / CIP 109416 / KR-200) RepID=L0A3C6_DEIPD
Zn-dependent hydrolase
Zn-dependent hydrolase, glyoxylase {ECO:0000313|EMBL:AFZ67944.1}; TaxID=937777 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus per
qs_8_scaffold_233_17
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

15956..16285
DNA (330bp) protein (110aa)
Putative cell division cycle protein {ECO:0000313|EMBL:CBH25040.1}; EC=3.4.24.- {ECO:0000313|EMBL:CBH25040.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; R
ATPase AAA n=1 Tax=Salisaeta longa RepID=UPI0003B548AE
cell division protein
qs_8_scaffold_233_18
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(16400..16597)
DNA (198bp) protein (66aa)
Prevent-host-death family protein n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SIS6_RHOMR
prevent-host-death family protein
Prevent-host-death family protein {ECO:0000313|EMBL:AEN72704.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodoth
qs_8_scaffold_233_19
RBG_19FT_COMBO_Deltaproteobacteria_43_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17055..18518
DNA (1464bp) protein (488aa)
Hypothetical membrane protein n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LUE4_SYNAS
hypothetical protein Tax=RBG_19FT_COMBO_Deltaproteobacteria_43_11_curated
hypothetical protein
qs_8_scaffold_233_20
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(18521..19303)
DNA (783bp) protein (261aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H7G0_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH23965.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_8_scaffold_233_21
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(19316..20182)
DNA (867bp) protein (289aa)
von Willebrand factor type A n=1 Tax=Salisaeta longa RepID=UPI0003B6C7E1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY49130.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus mari
qs_8_scaffold_233_22
Vitellibacter vladivostokensis, Vitellibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20235..20720)
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 / 9-3) RepID=I3YXY6_AEQSU
Signal peptide protein {ECO:0000313|EMBL:KJJ39466.1}; TaxID=171194 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Vitellibacter.;" source="Vitellibacter vladivo
hypothetical protein
qs_8_scaffold_233_23
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(20920..22122)
DNA (1203bp) protein (401aa)
dnaX; DNA polymerase III subunit gamma/tau; K02341 DNA polymerase III subunit delta' [EC:2.7.7.7] id=24657733 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
dnaX; DNA polymerase III subunit gamma/tau
Putative DNA polymerase III, delta' subunit {ECO:0000313|EMBL:ABC45426.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" sourc
qs_8_scaffold_233_24
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(22258..24768)
DNA (2511bp) protein (837aa)
penicillin-binding protein (EC:2.4.1.129)
Penicillin-binding protein, 1A family {ECO:0000313|EMBL:ACY47180.1}; EC=2.4.1.129 {ECO:0000313|EMBL:ACY47180.1};; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis;
penicillin-binding protein n=1 Tax=Salisaeta longa RepID=UPI0003B782C7
qs_8_scaffold_233_25
Alkalilimnicola ehrlichii, Alkalilimnicola, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25176..25922
DNA (747bp) protein (249aa)
membrane protein n=1 Tax=Salisaeta longa RepID=UPI0003B37F59
rhomboid family protein
Rhomboid family protein {ECO:0000313|EMBL:ABI57420.1}; TaxID=187272 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Alkalilimnicola.;" source="Alkalilimni
qs_8_scaffold_233_26
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

26077..27030
DNA (954bp) protein (318aa)
Rhomboid family protein n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SFN7_RHOMR
Rhomboid family protein
Rhomboid family protein {ECO:0000313|EMBL:AEN72207.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus mari
qs_8_scaffold_233_27
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

27188..28243
DNA (1056bp) protein (352aa)
Dioxygenase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H5Y5_SALRM
dioxygenase
Dioxygenase {ECO:0000313|EMBL:CBH23440.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (strain M8
qs_8_scaffold_233_28
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

28367..29461
DNA (1095bp) protein (365aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00186763};; 1-hydroxy-2-methyl-2
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S4R1_SALRD
ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
qs_8_scaffold_233_29
unknown

Not on your lists

29541..29753
DNA (213bp) protein (71aa)

This feature has no annotations

Displaying items 1-30 of 55 in total

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