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qs_8_scaffold_990

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Displaying 19 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_8_scaffold_990_1
Thermovibrio ammonificans, Thermovibrio, Desulfurobacteriales, Aquificae, Aquificae, Bacteria

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2..145
DNA (144bp) protein (48aa)
Elongation factor Tu n=1 Tax=Thermovibrio ammonificans (strain DSM 15698 / JCM 12110 / HB-1) RepID=E8T418_THEA1
translation elongation factor Tu
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=648996 species="Bacteria; Aquificae; Desulfurobacteriales;
qs_8_scaffold_990_trna_1
unknown

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244..316
DNA (73bp)
transferRNA
qs_8_scaffold_990_2
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

367..561
DNA (195bp) protein (65aa)
Protein translocase subunit SecE n=2 Tax=Rhodothermus marinus RepID=D0MHN5_RHOM4
preprotein translocase subunit SecE
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhod
qs_8_scaffold_990_3
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

631..1242
DNA (612bp) protein (204aa)
Transcription termination/antitermination protein NusG n=2 Tax=Rhodothermus marinus RepID=D0MHN6_RHOM4
NusG antitermination factor
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae
qs_8_scaffold_990_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


1356..1796
DNA (441bp) protein (147aa)
50S ribosomal protein L11 n=1 Tax=Salisaeta longa RepID=UPI0003B6EAF6
rplK; 50S ribosomal protein L11
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736, ECO:0000313|EMBL:CBH24896.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salini
qs_8_scaffold_990_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


1900..2613
DNA (714bp) protein (238aa)
50S ribosomal protein L1 n=1 Tax=Salisaeta longa RepID=UPI0003B6709E
rplA; 50S ribosomal protein L1
50S ribosomal protein L1 {ECO:0000255|HAMAP-Rule:MF_01318}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter
qs_8_scaffold_990_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


2729..3286
DNA (558bp) protein (186aa)
rplJ; 50S ribosomal protein L10
rplJ; 50S ribosomal protein L10; K02864 large subunit ribosomal protein L10 id=24659722 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
50S ribosomal protein L10 {ECO:0000255|HAMAP-Rule:MF_00362}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacte
qs_8_scaffold_990_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


3450..3833
DNA (384bp) protein (128aa)
rplL; 50S ribosomal protein L7/L12
rplL; 50S ribosomal protein L7/L12; K02935 large subunit ribosomal protein L7/L12 id=24659721 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
50S ribosomal protein L7/L12 {ECO:0000255|HAMAP-Rule:MF_00368}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Saliniba
qs_8_scaffold_990_8
Alistipes sp. CAG:268, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(4904..5977)
DNA (1074bp) protein (358aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:268 RepID=R6WUG8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDC97772.1}; TaxID=1262693 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes
qs_8_scaffold_990_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

5991..8186
DNA (2196bp) protein (732aa)
DNA-directed RNA polymerase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000255|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_01321};; RNA polymerase su
DNA-directed RNA polymerase subunit beta n=2 Tax=Salinibacter ruber RepID=RPOB_SALRD
rpoB; DNA-directed RNA polymerase subunit beta
qs_8_scaffold_990_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

8468..8938
DNA (471bp) protein (157aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322, ECO:0000313|EMBL:
DNA-directed RNA polymerase subunit beta'''' n=1 Tax=Salisaeta longa RepID=UPI0003B65FF5
rpoC; DNA-directed RNA polymerase subunit beta'
qs_8_scaffold_990_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

8935..12795
DNA (3861bp) protein (1287aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322, ECO:0000313|EMBL:
DNA-directed RNA polymerase subunit beta'''' n=1 Tax=Salisaeta longa RepID=UPI0003B65FF5
rpoC; DNA-directed RNA polymerase subunit beta'
qs_8_scaffold_990_12
unknown

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comp(12994..13308)
DNA (315bp) protein (105aa)

This feature has no annotations

qs_8_scaffold_990_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

13550..14188
DNA (639bp) protein (213aa)
TetR family transcriptional regulator n=1 Tax=Salisaeta longa RepID=UPI0003B37D4A
TetR family transcriptional regulator
Transcriptional regulator, TetR family protein {ECO:0000313|EMBL:ABC44661.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" so
qs_8_scaffold_990_14
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

14341..16290
DNA (1950bp) protein (650aa)
AMP-dependent synthetase n=1 Tax=Salisaeta longa RepID=UPI0003B38FF3
AMP-dependent synthetase and ligase
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ACY48594.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodo
qs_8_scaffold_990_15
Rhodopirellula sp. SWK7, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

16324..17607
DNA (1284bp) protein (428aa)
Endonuclease/exonuclease/phosphatase {ECO:0000313|EMBL:EMI42927.1}; EC=3.1.4.12 {ECO:0000313|EMBL:EMI42927.1};; TaxID=595460 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planct
Endonuclease/exonuclease/phosphatase n=1 Tax=Rhodopirellula sp. SWK7 RepID=M5T0Z7_9PLAN
endonuclease/exonuclease/phosphatase
qs_8_scaffold_990_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

17585..18451
DNA (867bp) protein (289aa)
Phosphatidylcholine synthase {ECO:0000313|EMBL:CBH23340.1}; EC=2.7.8.24 {ECO:0000313|EMBL:CBH23340.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodother
Phosphatidylcholine synthase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H5N5_SALRM
pssA; phosphatidylcholine synthase
qs_8_scaffold_990_17
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(18542..19978)
DNA (1437bp) protein (479aa)
Galactokinase {ECO:0000256|HAMAP-Rule:MF_00246, ECO:0000256|SAAS:SAAS00025843}; EC=2.7.1.6 {ECO:0000256|HAMAP-Rule:MF_00246, ECO:0000256|SAAS:SAAS00015833};; Galactose kinase {ECO:0000256|HAMAP-Rule:M
Galactokinase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MEU2_RHOM4
galactokinase
qs_8_scaffold_990_18
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(20014..20856)
DNA (843bp) protein (281aa)
sodium/glucose cotransporter
sodium/glucose cotransporter; K03307 solute:Na+ symporter, SSS family id=24657122 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Sodium/glucose cotransporter {ECO:0000313|EMBL:ABC43875.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter
Displaying 19 items

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