ggKbase home page

qs_8_scaffold_769

Search features with annotation key words

Displaying items 1-30 of 48 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_8_scaffold_769_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


2..1771
DNA (1770bp) protein (590aa)
gyrA; DNA gyrase subunit A; K02469 DNA gyrase subunit A [EC:5.99.1.3] id=24658142 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodother
gyrA; DNA gyrase subunit A
qs_8_scaffold_769_2
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

2157..2291
DNA (135bp) protein (45aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
qs_8_scaffold_769_3
Coleofasciculus chthonoplastes, Coleofasciculus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(2683..5247)
DNA (2565bp) protein (855aa)
Peptidase families S8 and S53 domain protein n=1 Tax=Coleofasciculus chthonoplastes PCC 7420 RepID=B4VVJ7_9CYAN
Peptidase families S8 and S53 domain protein {ECO:0000313|EMBL:EDX73882.1}; TaxID=118168 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Coleofasciculus.;" source="Coleofasci
subtilase family protease
qs_8_scaffold_769_4
Arthrobacter sp. IHBB 11108, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5358..7196)
DNA (1839bp) protein (613aa)
hypothetical protein n=1 Tax=Gracilimonas tropica RepID=UPI00036734F0
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJT41808.1}; TaxID=1618207 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. IHBB 11108.;"
qs_8_scaffold_769_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(7286..7984)
DNA (699bp) protein (233aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B52A80
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC45126.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_8_scaffold_769_6
Coleofasciculus chthonoplastes, Coleofasciculus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(7981..9777)
DNA (1797bp) protein (599aa)
Peptidase families S8 and S53 domain protein n=1 Tax=Coleofasciculus chthonoplastes PCC 7420 RepID=B4VVJ7_9CYAN
Peptidase families S8 and S53 domain protein {ECO:0000313|EMBL:EDX73882.1}; TaxID=118168 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Coleofasciculus.;" source="Coleofasci
hypothetical protein
qs_8_scaffold_769_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(9948..10589)
DNA (642bp) protein (214aa)
hypothetical protein
hypothetical protein id=24658143 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH25347.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_8_scaffold_769_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(10738..12123)
DNA (1386bp) protein (462aa)
Acetylornithine aminotransferase {ECO:0000313|EMBL:CBH23898.1}; EC=2.6.1.11 {ECO:0000313|EMBL:CBH23898.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodo
L-lysine aminotransferase n=1 Tax=Salisaeta longa RepID=UPI0003B3F32B
argD; Acetylornithine aminotransferase
qs_8_scaffold_769_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

12387..13448
DNA (1062bp) protein (354aa)
Lipoyl synthase {ECO:0000256|HAMAP-Rule:MF_00206}; EC=2.8.1.8 {ECO:0000256|HAMAP-Rule:MF_00206};; Lip-syn {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoate synthase {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoic
Lipoyl synthase n=2 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S4E9_SALRD
lipA; lipoyl synthase
qs_8_scaffold_769_10
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(13507..14976)
DNA (1470bp) protein (490aa)
rod shape-determining protein RodA n=1 Tax=Salisaeta longa RepID=UPI0003B3EA01
rod shape-determining protein RodA
Rod shape-determining protein RodA {ECO:0000313|EMBL:AEN74147.1}; Flags: Precursor;; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermu
qs_8_scaffold_769_11
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(15218..17086)
DNA (1869bp) protein (623aa)
penicillin-binding protein 2 (EC:2.4.1.129)
Penicillin-binding protein 2 {ECO:0000313|EMBL:AEN74148.1}; EC=2.4.1.129 {ECO:0000313|EMBL:AEN74148.1};; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothe
Penicillin-binding protein 2 n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SI92_RHOMR
qs_8_scaffold_769_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

17468..20629
DNA (3162bp) protein (1054aa)
peptidase S9 n=1 Tax=Salisaeta longa RepID=UPI0003B376FD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH25523.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_8_scaffold_769_13
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

20709..21863
DNA (1155bp) protein (385aa)
Dihydroorotate dehydrogenase (quinone) {ECO:0000256|SAAS:SAAS00084821}; EC=1.3.5.2 {ECO:0000256|SAAS:SAAS00084821};; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sed
Dihydroorotate dehydrogenase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MFJ9_RHOM4
dihydroorotate dehydrogenase
qs_8_scaffold_769_trna_1
unknown

Not on your lists

22052..22125
DNA (74bp)
transferRNA
qs_8_scaffold_769_14
Truepera radiovictrix, Truepera, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(22402..23832)
DNA (1431bp) protein (477aa)
MATE efflux family protein n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CWB4_TRURR
MATE efflux family protein rbh
MATE efflux family protein {ECO:0000313|EMBL:ADI16064.1}; Flags: Precursor;; TaxID=649638 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Trueperaceae; Truepera.;" source="Truepera
qs_8_scaffold_769_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

24288..26030
DNA (1743bp) protein (581aa)
hypothetical protein
hypothetical protein id=24658712 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH25897.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_8_scaffold_769_16
unknown

Not on your lists

comp(26074..26322)
DNA (249bp) protein (83aa)

This feature has no annotations

qs_8_scaffold_769_17
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(26468..27997)
DNA (1530bp) protein (510aa)
peptide chain release factor 3 n=1 Tax=Salisaeta longa RepID=UPI0003B767BC
prfC; peptide chain release factor 3
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroid
qs_8_scaffold_769_18
CG_OP9-01, Atribacteria, Bacteria

Not on your lists

comp(28145..29104)
DNA (960bp) protein (320aa)
hypothetical protein n=1 Tax=Paenibacillus sp. A9 RepID=UPI000361383B
hypothetical protein Tax=CG_OP9-01
hypothetical protein
qs_8_scaffold_769_19
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

29428..30339
DNA (912bp) protein (304aa)
Cysteine synthase A {ECO:0000313|EMBL:CBH25175.1}; EC=2.5.1.47 {ECO:0000313|EMBL:CBH25175.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; S
Cysteine synthase A n=2 Tax=Salinibacter ruber RepID=D5HAX0_SALRM
cysK; cysteine synthase A
qs_8_scaffold_769_20
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

30555..30998
DNA (444bp) protein (148aa)
Mov34/MPN/PAD-1 family n=2 Tax=Salinibacter ruber RepID=D5HAX1_SALRM
Mov34/MPN/PAD-1 family protein
Mov34/MPN/PAD-1 family {ECO:0000313|EMBL:CBH25176.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber
qs_8_scaffold_769_21
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

31140..31418
DNA (279bp) protein (93aa)
ThiamineS n=2 Tax=Salinibacter ruber RepID=D5HAX2_SALRM
ThiS family protein
ThiamineS {ECO:0000313|EMBL:CBH25177.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (strain M8).
qs_8_scaffold_769_22
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

31520..32737
DNA (1218bp) protein (406aa)
moeB; Molybdopterin biosynthesis protein moeB
moeB; Molybdopterin biosynthesis protein moeB; K11996 adenylyltransferase and sulfurtransferase id=24657974 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Molybdopterin biosynthesis protein moeB {ECO:0000313|EMBL:CBH25178.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="S
qs_8_scaffold_769_23
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(32825..33286)
DNA (462bp) protein (154aa)
Putative anti-sigma regulatory factor, serine/threonine protein kinase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MFG3_RHOM4
anti-sigma regulatory factor
Putative anti-sigma regulatory factor, serine/threonine protein kinase {ECO:0000313|EMBL:ACY47490.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodotherma
qs_8_scaffold_769_24
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(33673..34044)
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MF04_RHOM4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY47454.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus mari
qs_8_scaffold_769_25
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(34160..36916)
DNA (2757bp) protein (919aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|H
valS; valyl-tRNA synthetase; K01873 valyl-tRNA synthetase [EC:6.1.1.9] id=24657977 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
valS; valyl-tRNA synthetase
qs_8_scaffold_769_26
unknown

Not on your lists

comp(36913..37014)
DNA (102bp) protein (34aa)

This feature has no annotations

qs_8_scaffold_769_27
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(37011..38657)
DNA (1647bp) protein (549aa)
Phytoene dehydrogenase {ECO:0000313|EMBL:CBH25197.1}; EC=1.14.99.- {ECO:0000313|EMBL:CBH25197.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermacea
Phytoene dehydrogenase n=2 Tax=Salinibacter ruber RepID=D5HAZ2_SALRM
crtI; Phytoene dehydrogenase
qs_8_scaffold_769_28
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(38701..40608)
DNA (1908bp) protein (636aa)
PAS/PAC sensor hybrid histidine kinase {ECO:0000313|EMBL:ACY49286.1}; EC=2.7.13.3 {ECO:0000313|EMBL:ACY49286.1};; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis;
histidine kinase n=1 Tax=Salisaeta longa RepID=UPI0003B59069
PAS/PAC sensor hybrid histidine kinase
qs_8_scaffold_769_29
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(40889..42514)
DNA (1626bp) protein (542aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae;
PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MF32_RHOM4
PAS/PAC sensor signal transduction histidine kinase
Displaying items 1-30 of 48 in total

View Taxonomy