ggKbase home page

qs_8_scaffold_288

Search features with annotation key words

Displaying items 1-30 of 33 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_8_scaffold_288_1
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(1..471)
DNA (471bp) protein (157aa)
Quinol:cytochrome c oxidoreductase quinone-binding subunit 1 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IM97_KORVE
polysulfide reductase NrfD
Quinol:cytochrome c oxidoreductase quinone-binding subunit 1 {ECO:0000313|EMBL:ABF42003.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;"
qs_8_scaffold_288_2
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(536..1738)
DNA (1203bp) protein (401aa)
Putative uncharacterized protein n=1 Tax=Nitrosococcus watsoni (strain C-113) RepID=D8K583_NITWC
Fe-S-cluster-containing hydrogenase subunit Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
hypothetical protein
qs_8_scaffold_288_3
unknown

Not on your lists

comp(1690..2436)
DNA (747bp) protein (249aa)

This feature has no annotations

qs_8_scaffold_288_4
unknown

Not on your lists

comp(2464..3702)
DNA (1239bp) protein (413aa)

This feature has no annotations

qs_8_scaffold_288_5
Marinobacter nanhaiticus, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3827..4561)
DNA (735bp) protein (245aa)
hypothetical protein n=1 Tax=Halomonas lutea RepID=UPI0003724925
Chaperone protein HtpG {ECO:0000313|EMBL:ENO13034.1}; TaxID=626887 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter nanha
chaperone protein HtpG
qs_8_scaffold_288_6
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(4734..5117)
DNA (384bp) protein (128aa)
Methylglyoxal synthase {ECO:0000256|HAMAP-Rule:MF_00549, ECO:0000256|SAAS:SAAS00089917}; Short=MGS {ECO:0000256|HAMAP-Rule:MF_00549};; EC=4.2.3.3 {ECO:0000256|HAMAP-Rule:MF_00549, ECO:0000256|SAAS:SAA
Methylglyoxal synthase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MG34_RHOM4
methylglyoxal synthase
qs_8_scaffold_288_7

Not on your lists

comp(5345..6934)
DNA (1590bp) protein (530aa)
beta-N-acetylhexosaminidase., beta-lactamase (EC:3.5.2.6 3.2.1.52)
beta-N-acetylhexosaminidase n=1 Tax=Salisaeta longa RepID=UPI0003B5A4E9
Uncharacterized protein {ECO:0000313|EMBL:KKN48121.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
qs_8_scaffold_288_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(6931..7596)
DNA (666bp) protein (222aa)
nadD; nicotinate-nucleotide adenylyltransferase; K00969 nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] id=24658008 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Probable nicotinate-nucleotide adenylyltransferase {ECO:0000255|HAMAP-Rule:MF_00244}; EC=2.7.7.18 {ECO:0000255|HAMAP-Rule:MF_00244};; Deamido-NAD(+) diphosphorylase {ECO:0000255|HAMAP-Rule:MF_00244};
nadD; nicotinate-nucleotide adenylyltransferase
qs_8_scaffold_288_9
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(7701..8540)
DNA (840bp) protein (280aa)
Outer membrane assembly lipoprotein YfiO n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MFQ0_RHOM4
outer membrane assembly lipoprotein YfiO
Outer membrane assembly lipoprotein YfiO {ECO:0000313|EMBL:AEN74103.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="
qs_8_scaffold_288_10
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(8643..10178)
DNA (1536bp) protein (512aa)
Extracellular ligand-binding receptor n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MFP9_RHOM4
extracellular ligand-binding receptor rbh
Extracellular ligand-binding receptor {ECO:0000313|EMBL:ACY47576.1}; Flags: Precursor;; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothe
qs_8_scaffold_288_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(10318..11928)
DNA (1611bp) protein (537aa)
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008786}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO
GMP synthase [glutamine-hydrolyzing] n=2 Tax=Salinibacter ruber RepID=GUAA_SALRD
guaA; GMP synthase
qs_8_scaffold_288_12
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(12027..12404)
DNA (378bp) protein (126aa)
hypothetical protein n=1 Tax=Gracilimonas tropica RepID=UPI00036042C6
glycine cleavage system H protein
Glycine cleavage system H protein {ECO:0000256|HAMAP-Rule:MF_00272}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rho
qs_8_scaffold_288_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(12638..13996)
DNA (1359bp) protein (453aa)
Acetyl-CoA carboxylase, biotin carboxylase {ECO:0000313|EMBL:ABC44954.1}; EC=6.4.1.2 {ECO:0000313|EMBL:ABC44954.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sed
acetyl-CoA carboxylase subunit alpha n=1 Tax=Salisaeta longa RepID=UPI0003B57C6C
accC; acetyl-CoA carboxylase, biotin carboxylase
qs_8_scaffold_288_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(14113..14715)
DNA (603bp) protein (201aa)
Acetyl-CoA carboxylase, biotin carboxyl carrier protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S412_SALRD
accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein
Acetyl-CoA carboxylase, biotin carboxyl carrier protein {ECO:0000313|EMBL:ABC45433.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibac
qs_8_scaffold_288_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(14872..15441)
DNA (570bp) protein (190aa)
elongation factor P n=1 Tax=Salisaeta longa RepID=UPI0003B77C57
efp; translation elongation factor P
Elongation factor P {ECO:0000256|HAMAP-Rule:MF_00141, ECO:0000313|EMBL:CBH24049.1}; Short=EF-P {ECO:0000256|HAMAP-Rule:MF_00141};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II
qs_8_scaffold_288_16
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15752..18502
DNA (2751bp) protein (917aa)
Malto-oligosyltrehalose synthase n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LQ15_HALO1
malto-oligosyltrehalose synthase
Malto-oligosyltrehalose synthase {ECO:0000313|EMBL:ACY17052.1}; TaxID=502025 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" source="H
qs_8_scaffold_288_17
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

18813..20126
DNA (1314bp) protein (438aa)
Threonine synthase {ECO:0000313|EMBL:ACY48153.1}; EC=4.2.3.1 {ECO:0000313|EMBL:ACY48153.1};; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rho
Threonine synthase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MI45_RHOM4
threonine synthase
qs_8_scaffold_288_18
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

20375..22231
DNA (1857bp) protein (619aa)
Protein serine phosphatase with GAF(S) sensor(S) n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MDK1_RHOM4
protein serine phosphatase with GAF(s) sensor(s)
Protein serine phosphatase with GAF(S) sensor(S) {ECO:0000313|EMBL:ACY47194.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;"
qs_8_scaffold_288_19
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(22252..24453)
DNA (2202bp) protein (734aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HBZ9_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH25554.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_8_scaffold_288_20
Synechococcus sp. PCC 7335, Synechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

24810..25550
DNA (741bp) protein (247aa)
Putative uncharacterized protein n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WH77_9SYNE
Putative uncharacterized protein {ECO:0000313|EMBL:EDX87133.1}; TaxID=91464 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus.;" source="Synechococcus sp. PCC 7335.
qs_8_scaffold_288_21
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

25693..26955
DNA (1263bp) protein (421aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (
(dimethylallyl)adenosine tRNA methylthiotransferase n=1 Tax=Salinibacter ruber RepID=UPI000066E1D9
miaB; 2-methylthioadenine synthetase
qs_8_scaffold_288_22
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

27291..27650
DNA (360bp) protein (120aa)
hypothetical protein
hypothetical protein id=24658525 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:ABC46116.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_8_scaffold_288_23
unknown

Not on your lists

comp(27691..28080)
DNA (390bp) protein (130aa)

This feature has no annotations

qs_8_scaffold_288_24
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

28335..29816
DNA (1482bp) protein (494aa)
Response regulatory protein n=2 Tax=Salinibacter ruber RepID=Q2RZ83_SALRD
atoC; response regulatory protein
Response regulatory protein {ECO:0000313|EMBL:ABC45588.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter
qs_8_scaffold_288_25
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

29803..30426
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HCN4_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH25789.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_8_scaffold_288_26
Eimeria necatrix, Eimeria, Eucoccidiorida, Coccidia, Apicomplexa, Eukaryota

Not on your lists

comp(30523..30876)
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Eimeria necatrix RepID=U6N1A5_9EIME
Uncharacterized protein {ECO:0000313|EMBL:CDJ67725.1}; TaxID=51315 species="Eukaryota; Alveolata; Apicomplexa; Conoidasida; Coccidia; Eucoccidiorida; Eimeriorina; Eimeriidae; Eimeria.;" source="Eimeri
similar to predicted protein
qs_8_scaffold_288_27
unknown

Not on your lists

comp(30954..31142)
DNA (189bp) protein (63aa)

This feature has no annotations

qs_8_scaffold_288_28
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(31114..32184)
DNA (1071bp) protein (357aa)
Fe(3+) ions import ATP-binding protein fbpC {ECO:0000313|EMBL:CBH25539.1}; EC=3.6.3.30 {ECO:0000313|EMBL:CBH25539.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae s
iron ABC transporter ATP-binding protein n=1 Tax=Salisaeta longa RepID=UPI0003B6001B
fbpC; Fe(3+) ions import ATP-binding protein fbpC
qs_8_scaffold_288_29
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(32273..33949)
DNA (1677bp) protein (559aa)
Ferric transport system permease protein fbpB n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HBY5_SALRM
fbpB; ferric transport system permease fbpB
Ferric transport system permease protein fbpB {ECO:0000313|EMBL:CBH25540.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" sou
qs_8_scaffold_288_30
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(33999..35108)
DNA (1110bp) protein (370aa)
iron ABC transporter substrate-binding protein n=1 Tax=Salisaeta longa RepID=UPI0003B7AEAC
fbpA; Iron(III)-binding periplasmic protein
Iron(III)-binding periplasmic protein [Precursor] {ECO:0000313|EMBL:CBH25541.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;"
Displaying items 1-30 of 33 in total

View Taxonomy