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QS_9_Halobacteriales_64_74

In projects: QS_9  |  diaphorachaeota  |  archaea_ggkbase

Consensus taxonomy: Halobacteriales  →  Halobacteria  →  Euryarchaeota  →  Archaea

Taxonomy override: Euryarchaeota

Metagenomic Context

Parent: QS_9_UNK

Properties

Avg. coverage: 74.13 Longest contig: 29.43 Kbp Bin length: 2.62 Mbp GC content: 64.45 %
Contigs count: 284 Features count: 2806 rRNAs count: 1 tRNAs count: 17

Genome completeness

near complete RP 30 / 55 MC: 3 BSCG 27 / 51 MC: 1 ASCG 34 / 38
Displaying items 151-200 of 284 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qs_9_scaffold_2017
Order: Halobacteriales (55%)
20 17446 bp 65.53 74.10 80.29
qs_9_scaffold_4432
Species: Halomicrobium mukohataei (50%)
2 3894 bp 65.31 74.05 91.83
qs_9_scaffold_3538
Species: Halococcus morrhuae (50%)
6 6578 bp 64.82 74.00 86.88
qs_9_scaffold_2506
Class: Halobacteria (58.33%)
12 12251 bp 64.08 73.99 67.61
qs_9_scaffold_2605
Class: Halobacteria (71.43%)
7 8917 bp 66.56 73.93 83.27
qs_9_scaffold_7460
Order: Halobacteriales (80%)
10 5891 bp 64.67 73.89 73.18
qs_9_scaffold_3857
Order: Halobacteriales (71.43%)
7 8016 bp 63.51 73.89 83.31
qs_9_scaffold_4058
Class: Halobacteria (66.67%)
9 7309 bp 63.52 73.85 78.77
qs_9_scaffold_7166
Order: Halobacteriales (50%)
4 4142 bp 66.22 73.78 75.18
qs_9_scaffold_4876
Class: Halobacteria (57.14%)
7 9829 bp 64.05 73.74 84.15
qs_9_scaffold_3180
Class: Halobacteria (88.89%)
9 8703 bp 63.83 73.73 69.22
qs_9_scaffold_2483
Class: Halobacteria (80.77%)
26 23094 bp 63.52 73.70 80.37
qs_9_scaffold_5264
Order: Halobacteriales (50%)
6 6221 bp 65.54 73.70 70.55
qs_9_scaffold_1816
Class: Halobacteria (65.52%)
29 25193 bp 64.70 73.59 81.95
qs_9_scaffold_4714
Species: Natrinema versiforme (60%)
5 3719 bp 62.97 73.51 93.25
qs_9_scaffold_1703
Order: Halobacteriales (50%)
12 11198 bp 65.20 73.49 89.37
qs_9_scaffold_2295
Order: Halobacteriales (52.63%)
19 12522 bp 63.89 73.49 79.28
qs_9_scaffold_6905
Order: Halobacteriales (75%)
4 3623 bp 64.20 73.48 88.85
qs_9_scaffold_2474
Order: Halobacteriales (80%)
5 7768 bp 63.67 73.43 88.83
qs_9_scaffold_4553
Order: Halobacteriales (62.5%)
8 8446 bp 65.29 73.42 86.70
qs_9_scaffold_2616
Species: Halococcus saccharolyticus (50%)
6 5552 bp 65.29 73.38 85.64
qs_9_scaffold_3478
Order: Halobacteriales (61.54%)
13 12109 bp 64.83 73.35 80.64
qs_9_scaffold_881
Order: Halobacteriales (57.14%)
21 21410 bp 64.80 73.35 72.70
qs_9_scaffold_3767
Class: Halobacteria (76.92%)
13 12370 bp 61.87 73.34 79.21
qs_9_scaffold_7144
Order: Halobacteriales (85.71%)
7 7408 bp 63.89 73.34 81.12
qs_9_scaffold_10202
Class: Halobacteria (77.78%)
9 8120 bp 64.31 73.32 82.32
qs_9_scaffold_2930
Order: Halobacteriales (50%)
8 8932 bp 64.13 73.29 84.07
qs_9_scaffold_4396
Order: Halobacteriales (61.54%)
13 11714 bp 65.43 73.25 84.46
qs_9_scaffold_4232
Genus: Halococcus (50%)
10 13328 bp 61.64 73.08 76.80
qs_9_scaffold_5782
Class: Halobacteria (63.64%)
11 10967 bp 64.14 72.90 72.87
qs_9_scaffold_4750
Order: Halobacteriales (54.55%)
11 11720 bp 62.44 72.85 83.68
qs_9_scaffold_1335
Class: Halobacteria (80%)
15 13532 bp 63.61 72.80 81.10
qs_9_scaffold_2682
Genus: Halococcus (57.14%)
7 7780 bp 65.85 72.70 89.96
qs_9_scaffold_1577
Order: Halobacteriales (50%)
10 8908 bp 66.59 72.67 87.93
qs_9_scaffold_4149
Genus: Halococcus (50%)
10 8856 bp 64.51 72.65 81.81
qs_9_scaffold_2814
Order: Halobacteriales (66.67%)
18 18634 bp 65.68 72.60 94.67
qs_9_scaffold_2457
Order: Halobacteriales (50%)
10 6905 bp 63.88 72.51 80.42
qs_9_scaffold_6470
Class: Halobacteria (60%)
5 3474 bp 66.18 72.45 77.63
qs_9_scaffold_1614
Order: Halobacteriales (60%)
10 8972 bp 62.81 72.45 78.14
qs_9_scaffold_3674
Order: Natrialbales (50%)
8 8357 bp 65.25 72.44 82.06
qs_9_scaffold_899
Class: Halobacteria (78.57%)
14 12782 bp 63.87 72.32 88.04
qs_9_scaffold_4554
Genus: Halococcus (62.5%)
8 5858 bp 64.53 72.31 72.31
qs_9_scaffold_2648
Genus: Haloferax (60%)
5 5498 bp 64.59 72.30 98.38
qs_9_scaffold_3120
Species: Halococcus salifodinae (50%)
8 7255 bp 63.49 72.24 86.13
qs_9_scaffold_3774
Species: Halovivax ruber (50%)
2 4360 bp 63.46 72.18 69.15
qs_9_scaffold_2315
Order: Halobacteriales (60%)
5 6012 bp 63.97 72.16 83.33
qs_9_scaffold_1791
Order: Halobacteriales (53.85%)
13 13546 bp 64.25 72.15 84.51
qs_9_scaffold_2203
Order: Halobacteriales (50%)
10 6218 bp 63.56 72.11 84.43
qs_9_scaffold_5343
Class: Halobacteria (82.35%)
17 12587 bp 62.79 72.02 73.65
qs_9_scaffold_2751
Genus: Halococcus (54.55%)
11 6905 bp 65.95 71.88 86.59
Displaying items 151-200 of 284 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.