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QS_9_Eukaryota_52_13

QS_9_unknown_55_15
In projects: QS_9

Consensus taxonomy:

Taxonomy override: Eukaryote

Metagenomic Context

Parent: QS_9_UNK

Properties

Avg. coverage: 15.48 Longest contig: 230.46 Kbp Bin length: 11.28 Mbp GC content: 55.38 %
Contigs count: 327 Features count: 11017 rRNAs count: 2 tRNAs count: 44

Genome completeness

megabin RP 48 / 55 MC: 29 BSCG 44 / 51 MC: 24 ASCG 24 / 38 MC: 9
Displaying items 251-300 of 327 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qs_9_scaffold_1448 8 9270 bp 55.43 14.11 78.32
qs_9_scaffold_126 38 39832 bp 54.93 14.11 79.73
qs_9_scaffold_4983 4 6594 bp 59.40 14.10 88.03
qs_9_scaffold_53 52 47936 bp 55.47 14.09 75.68
qs_9_scaffold_876
Domain: Viridiplantae (60%)
10 11097 bp 55.32 14.09 68.51
qs_9_scaffold_2188 5 6244 bp 53.73 14.08 39.88
qs_9_scaffold_9387 4 3042 bp 47.40 14.07 47.73
qs_9_scaffold_637 18 13349 bp 54.03 14.04 77.53
qs_9_scaffold_189 23 27097 bp 54.59 14.02 72.33
qs_9_scaffold_33 109 109580 bp 56.13 14.02 77.57
qs_9_scaffold_3227 3 4843 bp 49.89 13.99 31.84
qs_9_scaffold_31 69 58948 bp 55.84 13.99 77.82
qs_9_scaffold_630 17 13421 bp 55.09 13.98 57.25
qs_9_scaffold_314
Domain: Viridiplantae (57.14%)
14 20097 bp 55.19 13.96 72.19
qs_9_scaffold_4222
Domain: Viridiplantae (50%)
8 7837 bp 61.73 13.95 85.36
qs_9_scaffold_419 19 22955 bp 55.99 13.93 58.56
qs_9_scaffold_86 74 72687 bp 61.64 13.91 88.28
qs_9_scaffold_161 50 57273 bp 56.82 13.91 74.90
qs_9_scaffold_1184 10 9274 bp 61.73 13.89 84.66
qs_9_scaffold_1585 12 7729 bp 56.84 13.88 78.76
qs_9_scaffold_215 78 81721 bp 61.53 13.85 88.15
qs_9_scaffold_117 34 34502 bp 56.27 13.84 71.55
qs_9_scaffold_778 26 20076 bp 61.12 13.83 81.41
qs_9_scaffold_3574
Order: Mamiellales (50%)
6 4525 bp 55.65 13.81 67.43
qs_9_scaffold_369 28 32919 bp 61.65 13.81 74.56
qs_9_scaffold_526 12 14935 bp 57.21 13.79 82.26
qs_9_scaffold_3296 5 4778 bp 51.63 13.79 62.66
qs_9_scaffold_640 22 19530 bp 57.05 13.78 76.97
qs_9_scaffold_2197 15 10213 bp 55.56 13.73 71.03
qs_9_scaffold_3523 12 8298 bp 58.95 13.73 77.04
qs_9_scaffold_281
Domain: Viridiplantae (50%)
24 21128 bp 54.90 13.68 78.71
qs_9_scaffold_568
Phylum: Chlorophyta (50%)
16 14339 bp 61.99 13.68 92.66
qs_9_scaffold_438 52 39457 bp 56.10 13.64 74.86
qs_9_scaffold_392
Domain: Viridiplantae (50%)
14 18217 bp 56.89 13.62 88.43
qs_9_scaffold_1929 7 6764 bp 53.80 13.62 69.06
qs_9_scaffold_1928
Order: Mamiellales (80%)
5 6775 bp 62.02 13.58 64.65
qs_9_scaffold_1732
Phylum: Chlorophyta (50%)
12 7262 bp 61.83 13.56 77.29
qs_9_scaffold_2051 14 12625 bp 62.05 13.55 87.87
qs_9_scaffold_2394 15 10825 bp 56.08 13.55 74.19
qs_9_scaffold_652 19 17717 bp 56.33 13.42 80.06
qs_9_scaffold_638 22 24392 bp 61.43 13.38 83.34
qs_9_scaffold_15584
Species: Bathycoccus prasinos (50%)
2 2406 bp 67.33 13.38 84.79
qs_9_scaffold_4569
Species: Monoraphidium neglectum (50%)
2 3814 bp 53.83 13.37 60.17
qs_9_scaffold_108 44 40449 bp 58.09 13.35 76.48
qs_9_scaffold_1574
Domain: Viridiplantae (55.56%)
9 14153 bp 57.92 13.29 87.97
qs_9_scaffold_1497 12 9868 bp 55.45 13.22 64.03
qs_9_scaffold_168 34 30505 bp 59.70 13.20 73.70
qs_9_scaffold_2726 6 5391 bp 54.83 13.19 77.02
qs_9_scaffold_12970
Phylum: Chlorophyta (66.67%)
3 1589 bp 57.71 13.15 47.20
qs_9_scaffold_1328
Phylum: Chlorophyta (50%)
12 13210 bp 60.58 13.11 87.48
Displaying items 251-300 of 327 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.