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RAAC_Alphaproteobacteria_38_40_19

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Displaying items 1-30 of 65 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RAAC_Alphaproteobacteria_38_40_19_1
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

224..1414
DNA (1191bp) protein (397aa)
Uncharacterized protein n=1 Tax=Fusobacterium ulcerans ATCC 49185 RepID=V9HT32_9FUSO
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
RAAC_Alphaproteobacteria_38_40_19_2
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

1428..1988
DNA (561bp) protein (187aa)
Elongation factor P n=1 Tax=Ilyobacter polytropus (strain DSM 2926 / CuHBu1) RepID=E3HCA4_ILYPC
translation elongation factor P (EF-P); K02356 elongation factor P Tax=GWF2_RBX1_38_17_curated
translation elongation factor P (EF-P)
RAAC_Alphaproteobacteria_38_40_19_3
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

2195..2971
DNA (777bp) protein (259aa)
alpha,alpha-trehalose-phosphate synthase (UDP-forming) (EC:2.4.1.15) Tax=GWF2_RBX1_38_17_curated
alpha,alpha-trehalose-phosphate synthase (UDP-forming)/trehalose-phosphatase (EC:2.4.1.15)
hypothetical protein n=1 Tax=Latescibacteria bacterium SCGC AAA252-D10 RepID=UPI000367FF45
RAAC_Alphaproteobacteria_38_40_19_trna_1
unknown

Not on your lists

3090..3176
DNA (87bp)
transferRNA
RAAC_Alphaproteobacteria_38_40_19_4
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(3421..5466)
DNA (2046bp) protein (682aa)
ATP-dependent protease La n=1 Tax=Syntrophomonas wolfei subsp. wolfei (strain DSM 2245B / Goettingen) RepID=Q0AY91_SYNWW rbh
ATP-dependent protease La Tax=GWF2_RBX1_38_17_curated
ATP-dependent Lon protease
RAAC_Alphaproteobacteria_38_40_19_5
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(5479..7716)
DNA (2238bp) protein (746aa)
Putative uncharacterized protein n=1 Tax=Syntrophomonas wolfei subsp. wolfei (strain DSM 2245B / Goettingen) RepID=Q0AY92_SYNWW rbh
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
RAAC_Alphaproteobacteria_38_40_19_6
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(7709..8722)
DNA (1014bp) protein (338aa)
Uncharacterized protein n=1 Tax=Acinetobacter tjernbergiae DSM 14971 = CIP 107465 RepID=V2UYK0_9GAMM
hypothetical protein Tax=GWF2_RBX1_38_17_curated
protein of unknown function DUF1016
RAAC_Alphaproteobacteria_38_40_19_7
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(8765..12496)
DNA (3732bp) protein (1244aa)
Uncharacterized protein n=17 Tax=Vibrio cholerae RepID=F9BJ00_VIBCL rbh
hypothetical protein Tax=GWF2_RBX1_38_17_curated
restriction endonuclease Eco57I rbh
RAAC_Alphaproteobacteria_38_40_19_8
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(12546..12917)
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=planctomycete KSU-1 RepID=I3IQU2_9PLAN
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
RAAC_Alphaproteobacteria_38_40_19_9
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(12966..16562)
DNA (3597bp) protein (1199aa)
Putative uncharacterized protein n=1 Tax=Syntrophomonas wolfei subsp. wolfei (strain DSM 2245B / Goettingen) RepID=Q0AYA0_SYNWW rbh
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein rbh
RAAC_Alphaproteobacteria_38_40_19_10
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(16583..17140)
DNA (558bp) protein (186aa)
Putative uncharacterized protein n=1 Tax=Syntrophomonas wolfei subsp. wolfei (strain DSM 2245B / Goettingen) RepID=Q0AYA1_SYNWW
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
RAAC_Alphaproteobacteria_38_40_19_11
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(17121..17879)
DNA (759bp) protein (253aa)
Putative uncharacterized protein n=1 Tax=Syntrophomonas wolfei subsp. wolfei (strain DSM 2245B / Goettingen) RepID=Q0AYA2_SYNWW
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
RAAC_Alphaproteobacteria_38_40_19_12
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

18603..18998
DNA (396bp) protein (132aa)
id=3202241 Tax=GWF2_RBX1_38_17_curated
RAAC_Alphaproteobacteria_38_40_19_13
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(19045..20841)
DNA (1797bp) protein (599aa)
Type II and III secretion system protein n=1 Tax=Rhodopirellula maiorica SM1 RepID=M5S5K9_9PLAN
type II and III secretion system protein Tax=GWF2_RBX1_38_17_curated
type II and III secretion system protein
RAAC_Alphaproteobacteria_38_40_19_14
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(20851..21378)
DNA (528bp) protein (176aa)
id=1978988 Tax=GWF2_RBX1_38_17_curated
RAAC_Alphaproteobacteria_38_40_19_15
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(21391..21951)
DNA (561bp) protein (187aa)
id=1978989 Tax=GWF2_RBX1_38_17_curated
RAAC_Alphaproteobacteria_38_40_19_16
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(21968..23959)
DNA (1992bp) protein (664aa)
Type IV pilus assembly protein PilM n=1 Tax=Clostridium ultunense Esp RepID=M1ZCU3_9CLOT
type IV pilus assembly protein PilM; K02662 type IV pilus assembly protein PilM Tax=GWF2_RBX1_38_17_curated
type IV pilus assembly protein PilM
RAAC_Alphaproteobacteria_38_40_19_17
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(24160..24591)
DNA (432bp) protein (144aa)
id=1979034 Tax=GWF2_RBX1_38_17_curated
RAAC_Alphaproteobacteria_38_40_19_18
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(24593..25132)
DNA (540bp) protein (180aa)
id=1979035 Tax=GWF2_RBX1_38_17_curated
RAAC_Alphaproteobacteria_38_40_19_19
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(25095..25520)
DNA (426bp) protein (142aa)
id=1979036 Tax=GWF2_RBX1_38_17_curated
RAAC_Alphaproteobacteria_38_40_19_20
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(25545..26042)
DNA (498bp) protein (166aa)
Prepilin-type cleavage/methylation N-terminal domain protein Tax=GWF2_RBX1_38_17_curated
RAAC_Alphaproteobacteria_38_40_19_21
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(26070..26402)
DNA (333bp) protein (111aa)
Putative fimbrial protein n=1 Tax=Caldisericum exile (strain DSM 21853 / NBRC 104410 / AZM16c01) RepID=I0GLF6_CALEA
putative fimbrial protein; K02456 general secretion pathway protein G Tax=GWF2_RBX1_38_17_curated
putative fimbrial protein
RAAC_Alphaproteobacteria_38_40_19_22
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(26757..27965)
DNA (1209bp) protein (403aa)
hypothetical protein n=1 Tax=Atribacteria bacterium JGI 0000059-I14 RepID=UPI000376ABBC
type II secretion system F domain-containing protein; K12278 MSHA biogenesis protein MshG Tax=GWF2_RBX1_38_17_curated
type II secretion system F domain-containing protein
RAAC_Alphaproteobacteria_38_40_19_23
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(27974..29527)
DNA (1554bp) protein (518aa)
type II secretion system protein E n=1 Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B7812C
type II secretion system protein E (GspE); K02652 type IV pilus assembly protein PilB Tax=GWF2_RBX1_38_17_curated
type II secretion system protein E (GspE)
RAAC_Alphaproteobacteria_38_40_19_24
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(29520..29903)
DNA (384bp) protein (128aa)
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain Tax=GWF2_RBX1_38_17_curated
two component transcriptional regulator, winged helix family; K07658 two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP alias=ACD20_C00051G00008,ACD20_8050.30705.15G0008,ACD20_8050.30705.15_8 id=19141 tax=ACD20 species=Desulfotomaculum acetoxidans genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes organism_group=Novel_Cyano/Firm organism_desc=Novel_Cyano/Firm
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
RAAC_Alphaproteobacteria_38_40_19_25
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(29912..30286)
DNA (375bp) protein (125aa)
histidine kinase n=1 Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B71ACC
response regulator receiver protein Tax=GWF2_RBX1_38_17_curated
response regulator receiver protein
RAAC_Alphaproteobacteria_38_40_19_26
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(30300..31817)
DNA (1518bp) protein (506aa)
PAS/PAC sensor hybrid histidine kinase (EC:2.7.13.3)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002E5E19B
PAS/PAC sensor signal transduction histidine kinase Tax=GWF2_RBX1_38_17_curated
RAAC_Alphaproteobacteria_38_40_19_27
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(31938..32330)
DNA (393bp) protein (131aa)
Mutator MutT protein n=1 Tax=Spirochaeta caldaria (strain ATCC 51460 / DSM 7334 / H1) RepID=F8EY71_SPICH
NUDIX hydrolase Tax=GWF2_RBX1_38_17_curated
mutator MutT protein
RAAC_Alphaproteobacteria_38_40_19_28
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(32490..33071)
DNA (582bp) protein (194aa)
Putative endo-beta-1,3-glucanase n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I5F3_CALAS
putative endo-beta-1,3-glucanase Tax=GWF2_RBX1_38_17_curated
putative endo-beta-1,3-glucanase
RAAC_Alphaproteobacteria_38_40_19_29
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

33255..33617
DNA (363bp) protein (121aa)
Two-component response regulator n=8 Tax=Bacillus RepID=D4FWN0_BACNB
regulator of chemotaxis and motility; K03413 two-component system, chemotaxis family, response regulator CheY Tax=GWF2_RBX1_38_17_curated
cheY; regulator of chemotaxis and motility
Displaying items 1-30 of 65 in total

View Taxonomy