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RAAC_Alphaproteobacteria_38_40_4

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Displaying items 1-30 of 108 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RAAC_Alphaproteobacteria_38_40_4_1
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

235..633
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Rhodonellum psychrophilum GCM71 = DSM 17998 RepID=U5BLL4_9BACT
histidine kinase Tax=GWF2_RBX1_38_17_curated
histidine kinase
RAAC_Alphaproteobacteria_38_40_4_2
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(666..1277)
DNA (612bp) protein (204aa)
Radical SAM domain protein n=1 Tax=Desulfotomaculum ruminis (strain ATCC 23193 / DSM 2154 / NCIB 8452 / DL) RepID=F6DLC9_DESRL
radical SAM protein Tax=GWF2_RBX1_38_17_curated
radical SAM protein
RAAC_Alphaproteobacteria_38_40_4_3
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(1280..1966)
DNA (687bp) protein (229aa)
cytidylate kinase; K00945 cytidylate kinase [EC:2.7.4.14] Tax=GWF2_RBX1_38_17_curated
Cytidylate kinase n=1 Tax=Thermoanaerobacter ethanolicus JW 200 RepID=F1ZX50_THEET
cytidylate kinase
RAAC_Alphaproteobacteria_38_40_4_4
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(1963..2973)
DNA (1011bp) protein (337aa)
Radical SAM domain protein; K04069 pyruvate formate lyase activating enzyme [EC:1.97.1.4] Tax=GWF2_RBX1_38_17_curated
Radical SAM domain protein n=1 Tax=Thermodesulfobium narugense DSM 14796 RepID=M1E943_9FIRM rbh
Radical SAM domain protein
RAAC_Alphaproteobacteria_38_40_4_5
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

3204..4061
DNA (858bp) protein (286aa)
hypothetical protein n=1 Tax=Orenia marismortui RepID=UPI000364D1E6
shikimate 5-dehydrogenase Tax=GWF2_RBX1_38_17_curated
shikimate 5-dehydrogenase
RAAC_Alphaproteobacteria_38_40_4_6
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(4291..4407)
DNA (117bp) protein (39aa)
id=1860096 Tax=GWF2_RBX1_38_17_curated
RAAC_Alphaproteobacteria_38_40_4_7
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

4616..5125
DNA (510bp) protein (170aa)
ThiJ/PfpI domain-containing protein; K05520 protease I [EC:3.2.-.-] Tax=GWF2_RBX1_38_17_curated
ThiJ/PfpI domain-containing protein n=1 Tax=Thermodesulfobacterium geofontis (strain OPB45) RepID=F8C624_THEGP
ThiJ/PfpI domain-containing protein
RAAC_Alphaproteobacteria_38_40_4_8
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

5165..6556
DNA (1392bp) protein (464aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TT75_ALKMQ
two component sigma54 specific Fis family transcriptional regulator Tax=GWF2_RBX1_38_17_curated
two component sigma54 specific Fis family transcriptional regulator
RAAC_Alphaproteobacteria_38_40_4_9
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

6840..7292
DNA (453bp) protein (151aa)
Response regulator receiver protein n=1 Tax=Pelobacter propionicus (strain DSM 2379) RepID=A1ATD8_PELPD
response regulator receiver protein Tax=GWF2_RBX1_38_17_curated
response regulator receiver protein
RAAC_Alphaproteobacteria_38_40_4_10
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

7486..8871
DNA (1386bp) protein (462aa)
Radical SAM domain protein n=1 Tax=Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 / Av18) RepID=D2RHE6_ARCPA
radical SAM protein Tax=GWF2_RBX1_38_17_curated
radical SAM protein
RAAC_Alphaproteobacteria_38_40_4_11
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

8886..9512
DNA (627bp) protein (209aa)
Uncharacterized protein n=2 Tax=Bacillus RepID=C3AS20_BACMY
N-acetyltransferase GCN5 Tax=GWF2_RBX1_38_17_curated
acetyltransferase family protein
RAAC_Alphaproteobacteria_38_40_4_12
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

9515..10870
DNA (1356bp) protein (452aa)
hypothetical protein n=1 Tax=candidate division OP9 bacterium OP9-77CS RepID=UPI000370F55E rbh
Fe-S oxidoreductase Tax=GWF2_RBX1_38_17_curated
Fe-S oxidoreductase
Interpro: Cobalamin-binding, Radical SAM and DUF by interpro Jill Banfield (1/30/17)
RAAC_Alphaproteobacteria_38_40_4_13
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

10904..12967
DNA (2064bp) protein (688aa)
signal transduction histidine kinase; K02482 two-component system, NtrC family, sensor kinase [EC:2.7.13.3] Tax=GWF2_RBX1_38_17_curated
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA036-E14 RepID=UPI00036F2D69
signal transduction histidine kinase
RAAC_Alphaproteobacteria_38_40_4_14
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

13102..14190
DNA (1089bp) protein (363aa)
peptidase M29, aminopeptidase II; K01269 aminopeptidase [EC:3.4.11.-] Tax=GWF2_RBX1_38_17_curated
Peptidase M29, aminopeptidase II n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AWU4_RUBXD rbh
peptidase M29, aminopeptidase II
RAAC_Alphaproteobacteria_38_40_4_15
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

14200..15099
DNA (900bp) protein (300aa)
Thioredoxin-disulfide reductase n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KUP3_METHD
thioredoxin-disulfide reductase Tax=GWF2_RBX1_38_17_curated
thioredoxin-disulfide reductase
RAAC_Alphaproteobacteria_38_40_4_16
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

15672..16058
DNA (387bp) protein (129aa)
Response regulator containing a CheY-like receiver domain and a GGDEF domain n=1 Tax=Thermanaerovibrio velox DSM 12556 RepID=H0URB6_9BACT
response regulator receiver protein Tax=GWF2_RBX1_38_17_curated
response regulator receiver protein
RAAC_Alphaproteobacteria_38_40_4_17
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(16064..19234)
DNA (3171bp) protein (1057aa)
putative DEAD/DEAH box helicase Tax=GWF2_RBX1_38_17_curated
Snf2 alias=MEL_C2_C00010G00002 id=471417 tax=MEL_C2 species=Treponema phagedenis genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes rbh
putative DEAD/DEAH box helicase
RAAC_Alphaproteobacteria_38_40_4_18
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

19837..21543
DNA (1707bp) protein (569aa)
Type II secretion system protein E (GspE) n=1 Tax=Acetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288) RepID=D9QRY8_ACEAZ rbh
type II secretion system protein E (GspE); K02652 type IV pilus assembly protein PilB Tax=GWF2_RBX1_38_17_curated
type II secretion system protein E (GspE)
RAAC_Alphaproteobacteria_38_40_4_19
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

21567..22778
DNA (1212bp) protein (404aa)
type II secretion system protein F n=1 Tax=Geopsychrobacter electrodiphilus RepID=UPI00035FBBF0
type 4 fimbrial assembly protein (PilC); K02653 type IV pilus assembly protein PilC Tax=GWF2_RBX1_38_17_curated
type 4 fimbrial assembly protein (PilC)
RAAC_Alphaproteobacteria_38_40_4_20
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

22923..23342
DNA (420bp) protein (140aa)
General secretion pathway protein H n=1 Tax=Pseudanabaena biceps PCC 7429 RepID=L8N0E4_9CYAN
pilA; pilin; K02650 type IV pilus assembly protein PilA Tax=GWF2_RBX1_38_17_curated
pilA; pilin
RAAC_Alphaproteobacteria_38_40_4_21
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

23479..24000
DNA (522bp) protein (174aa)
Type IV fimbrial biogenesis protein FimT n=1 Tax=Halomonas sp. HAL1 RepID=G4FAD4_9GAMM
Type IV fimbrial biogenesis protein FimT Tax=GWF2_RBX1_38_17_curated
RAAC_Alphaproteobacteria_38_40_4_22
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

24018..24509
DNA (492bp) protein (164aa)
id=1860168 Tax=GWF2_RBX1_38_17_curated
RAAC_Alphaproteobacteria_38_40_4_23
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

24511..26100
DNA (1590bp) protein (530aa)
id=1860169 Tax=GWF2_RBX1_38_17_curated
RAAC_Alphaproteobacteria_38_40_4_24
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

26137..26664
DNA (528bp) protein (176aa)
id=1860171 Tax=GWF2_RBX1_38_17_curated
RAAC_Alphaproteobacteria_38_40_4_25
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

26675..28237
DNA (1563bp) protein (521aa)
id=4212640 Tax=GWF2_RBX1_38_17_curated
pilM; putative fimbrial assembly protein PilM; K02662 type IV pilus assembly protein PilM alias=ACD20_6299.103852.14G0008,ACD20_6299.103852.14_8,ACD20_C00053G00008 id=19233 tax=ACD20 species=Thermosynechococcus elongatus genus=Thermosynechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria organism_group=Novel_Cyano/Firm organism_desc=Novel_Cyano/Firm
RAAC_Alphaproteobacteria_38_40_4_26
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

28378..28812
DNA (435bp) protein (145aa)
id=1860173 Tax=GWF2_RBX1_38_17_curated
RAAC_Alphaproteobacteria_38_40_4_27
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

28846..29817
DNA (972bp) protein (324aa)
id=1860174 Tax=GWF2_RBX1_38_17_curated
RAAC_Alphaproteobacteria_38_40_4_28
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

29814..31952
DNA (2139bp) protein (713aa)
Type II and III secretion system protein n=1 Tax=Acetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288) RepID=D9QRX3_ACEAZ
type II and III secretion system protein; K02666 type IV pilus assembly protein PilQ Tax=GWF2_RBX1_38_17_curated
type II and III secretion system protein
RAAC_Alphaproteobacteria_38_40_4_29
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists


comp(32117..32377)
DNA (261bp) protein (87aa)
30S ribosomal protein S20 n=1 Tax=Ruminococcus sp. CAG:579 RepID=R6CK40_9FIRM
rpsT; 30S ribosomal protein S20; K02968 small subunit ribosomal protein S20 Tax=GWF2_RBX1_38_17_curated
rpsT; ribosomal protein S20
RAAC_Alphaproteobacteria_38_40_4_30
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

32720..33568
DNA (849bp) protein (283aa)
acetyl-CoA carboxylase, carboxyl transferase subunit beta; K01963 acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2] Tax=GWF2_RBX1_38_17_curated
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G6M0_GEOUR rbh
acetyl-CoA carboxylase, carboxyl transferase subunit beta
Displaying items 1-30 of 108 in total

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