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RAAC_Alphaproteobacteria_38_40_13

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Displaying items 1-30 of 72 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RAAC_Alphaproteobacteria_38_40_13_1
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

181..1140
DNA (960bp) protein (320aa)
id=2148147 Tax=GWF2_RBX1_38_17_curated
RAAC_Alphaproteobacteria_38_40_13_2
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

1145..2506
DNA (1362bp) protein (454aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G5L8_GEOUR rbh
two component sigma-54 specific Fis family transcriptional regulator Tax=GWF2_RBX1_38_17_curated
two component sigma-54 specific Fis family transcriptional regulator
RAAC_Alphaproteobacteria_38_40_13_3
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(2492..4933)
DNA (2442bp) protein (814aa)
putative histidine kinase (EC:2.7.13.3) Tax=GWF2_RBX1_38_17_curated
putative histidine kinase (EC:2.7.13.3)
Putative Histidine kinase, contains GAF domain n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBW7_9BACT
RAAC_Alphaproteobacteria_38_40_13_4
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(4935..5069)
DNA (135bp) protein (45aa)
id=2148150 Tax=GWF2_RBX1_38_17_curated
RAAC_Alphaproteobacteria_38_40_13_5
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(5314..5838)
DNA (525bp) protein (175aa)
fumarate hydratase subunit beta (EC:4.2.1.2); K01678 fumarate hydratase subunit beta [EC:4.2.1.2] Tax=GWF2_RBX1_38_17_curated
putative fumarate hydratase subunit beta (Fumarase) (EC:4.2.1.2)
Fumarate hydratase class I, aerobic L(+)-tartrate dehydratase beta subunit n=1 Tax=Caloramator australicus RC3 RepID=I7KV83_9CLOT
RAAC_Alphaproteobacteria_38_40_13_6
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(5831..6382)
DNA (552bp) protein (184aa)
5-formyltetrahydrofolate cyclo-ligase (EC:6.3.3.2); K01934 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] Tax=GWF2_RBX1_38_17_curated
5-formyltetrahydrofolate cyclo-ligase (EC:6.3.3.2)
5-formyltetrahydrofolate cyclo-ligase n=2 Tax=root RepID=R6MII1_9FIRM
RAAC_Alphaproteobacteria_38_40_13_7
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(6400..7242)
DNA (843bp) protein (281aa)
Fe-S type, tartrate/fumarate subfamily hydro-lyase subunit alpha (EC:4.2.1.2); K01677 fumarate hydratase subunit alpha [EC:4.2.1.2] Tax=GWF2_RBX1_38_17_curated
Fe-S type, tartrate/fumarate subfamily hydro-lyase subunit alpha (EC:4.2.1.2)
Hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit n=1 Tax=Desulfurobacterium thermolithotrophum (strain DSM 11699 / BSA) RepID=F0S3G1_DESTD rbh
RAAC_Alphaproteobacteria_38_40_13_8
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(7242..8501)
DNA (1260bp) protein (420aa)
icd; isocitrate dehydrogenase, nADP-dependent; K00031 isocitrate dehydrogenase [EC:1.1.1.42] Tax=GWF2_RBX1_38_17_curated
isocitrate dehydrogenase, NADP-dependent (EC:1.1.1.42); K00031 isocitrate dehydrogenase [EC:1.1.1.42] alias=RBG1_1802,RBG1_C00001G01802 id=1251360 tax=RBG1 species=Thermodesulfobacterium sp. OPB45 genus=Thermodesulfobacterium taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria rbh
icd; isocitrate dehydrogenase, nADP-dependent
RAAC_Alphaproteobacteria_38_40_13_9
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(8618..9121)
DNA (504bp) protein (168aa)
3-isopropylmalate dehydratase small subunit; K01704 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] Tax=GWF2_RBX1_38_17_curated
3-isopropylmalate dehydratase small subunit n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XM21_METZD
3-isopropylmalate dehydratase small subunit
RAAC_Alphaproteobacteria_38_40_13_10
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(9138..10391)
DNA (1254bp) protein (418aa)
homoaconitate hydratase family protein (EC:4.2.1.33); K01703 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] Tax=GWF2_RBX1_38_17_curated
homoaconitate hydratase family protein (EC:4.2.1.33)
3-isopropylmalate dehydratase large subunit n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XNG5_METZD rbh
RAAC_Alphaproteobacteria_38_40_13_11
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(10406..12220)
DNA (1815bp) protein (605aa)
histone-lysine N-methyltransferase n=1 Tax=Thermodesulfatator atlanticus RepID=UPI0003B32AAA rbh
pyruvate carboxyltransferase Tax=GWF2_RBX1_38_17_curated
pyruvate carboxyltransferase
RAAC_Alphaproteobacteria_38_40_13_12
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(12398..14980)
DNA (2583bp) protein (861aa)
Glycoside hydrolase n=1 Tax=Clostridium sp. CAG:967 RepID=R5K6E2_9CLOT rbh
alpha-amylase/alpha-mannosidase Tax=GWF2_RBX1_38_17_curated
alpha-amylase/alpha-mannosidase
PsortB: cytoplasmic Paula Matheus (11/10/15)
RAAC_Alphaproteobacteria_38_40_13_13
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(15136..15645)
DNA (510bp) protein (170aa)
Conserved protein/domain typically associated with flavoprotein oxygenase, DIM6/NTAB family n=1 Tax=Archaeoglobus sulfaticallidus PM70-1 RepID=N0BGZ8_9EURY
Conserved protein/domain typically associated with flavoprotein oxygenase, DIM6/NTAB family Tax=GWF2_RBX1_38_17_curated
Conserved protein/domain typically associated with flavoprotein oxygenase, DIM6/NTAB family
RAAC_Alphaproteobacteria_38_40_13_14
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

15822..16181
DNA (360bp) protein (120aa)
vanz family protein Tax=GWF2_RBX1_38_17_curated
vanz family protein
RAAC_Alphaproteobacteria_38_40_13_15
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

16373..19006
DNA (2634bp) protein (878aa)
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28); K01448 N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] Tax=GWF2_RBX1_38_17_curated
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Halanaerobium hydrogeniformans RepID=E4RPV1_HALHG
RAAC_Alphaproteobacteria_38_40_13_16
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

19007..19813
DNA (807bp) protein (269aa)
murI; glutamate racemase (EC:5.1.1.3); K01776 glutamate racemase [EC:5.1.1.3] Tax=GWF2_RBX1_38_17_curated
Glutamate racemase n=201 Tax=Clostridium difficile RepID=C9XSG6_CLODC
murI; glutamate racemase
RAAC_Alphaproteobacteria_38_40_13_17
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

19914..20270
DNA (357bp) protein (119aa)
queuosine biosynthesis protein QueD; K01737 6-pyruvoyl tetrahydrobiopterin synthase [EC:4.2.3.12] Tax=GWF2_RBX1_38_17_curated
6-carboxy-5,6,7,8-tetrahydropterin synthase n=1 Tax=Thermodesulfobacterium geofontis (strain OPB45) RepID=F8C2N0_THEGP
6-pyruvoyl tetrahydrobiopterin synthase
RAAC_Alphaproteobacteria_38_40_13_18
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

20332..20982
DNA (651bp) protein (217aa)
7-cyano-7-deazaguanine synthase n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CQY0_DESK7
exoenzyme S synthesis protein B; K06920 queuosine biosynthesis protein QueC Tax=GWF2_RBX1_38_17_curated
exoenzyme S synthesis protein B
RAAC_Alphaproteobacteria_38_40_13_19
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(20979..22100)
DNA (1122bp) protein (374aa)
cyclopropane-fatty-acyl-phospholipid synthase; K00574 cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] Tax=GWF2_RBX1_38_17_curated
cyclopropane-fatty-acyl-phospholipid synthase (EC:2.1.1.79)
Cyclopropane-fatty-acyl-phospholipid synthase n=1 Tax=Denitrovibrio acetiphilus (strain DSM 12809 / N2460) RepID=D4H0Q4_DENA2 rbh
RAAC_Alphaproteobacteria_38_40_13_20
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(22121..22585)
DNA (465bp) protein (155aa)
id=2148215 Tax=GWF2_RBX1_38_17_curated
RAAC_Alphaproteobacteria_38_40_13_21
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(22610..23125)
DNA (516bp) protein (172aa)
id=2148216 Tax=GWF2_RBX1_38_17_curated
RAAC_Alphaproteobacteria_38_40_13_22
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

23445..24008
DNA (564bp) protein (188aa)
id=2148217 Tax=GWF2_RBX1_38_17_curated
RAAC_Alphaproteobacteria_38_40_13_23
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

24286..25179
DNA (894bp) protein (298aa)
Flagellar protein FlgJ [peptidoglycan hydrolase] protein n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2TWI4_9DELT
lytic transglycosylase Tax=GWF2_RBX1_38_17_curated
lytic transglycosylase
RAAC_Alphaproteobacteria_38_40_13_24
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

25501..27330
DNA (1830bp) protein (610aa)
GTP-binding protein TypA n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z3R0_DESAT rbh
GTP-binding protein TypA; K06207 GTP-binding protein Tax=GWF2_RBX1_38_17_curated
GTP-binding protein TypA
RAAC_Alphaproteobacteria_38_40_13_25
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

27405..27662
DNA (258bp) protein (86aa)
id=1951265 Tax=GWF2_RBX1_38_17_curated
RAAC_Alphaproteobacteria_38_40_13_26
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(27751..28779)
DNA (1029bp) protein (343aa)
TrkA-N domain protein n=1 Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FL91_DESAA
TrkA-N domain-containing protein Tax=GWF2_RBX1_38_17_curated
TrkA-N domain-containing protein
RAAC_Alphaproteobacteria_38_40_13_27
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

28947..30767
DNA (1821bp) protein (607aa)
adenylate/guanylate cyclase with Chase sensor; K01768 adenylate cyclase [EC:4.6.1.1] Tax=GWF2_RBX1_38_17_curated
hypothetical protein n=1 Tax=Cloacimonetes bacterium JGI 0000039-G13 RepID=UPI000373D77B rbh
adenylate/guanylate cyclase with Chase sensor
RAAC_Alphaproteobacteria_38_40_13_28
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

30798..33695
DNA (2898bp) protein (966aa)
hypothetical protein n=1 Tax=SAR406 cluster bacterium SCGC AB-629-J13 RepID=UPI00036E62B4
Uncharacterized protein Tax=GWF2_RBX1_38_17_curated
RAAC_Alphaproteobacteria_38_40_13_29
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

33695..34669
DNA (975bp) protein (325aa)
id=1951257 Tax=GWF2_RBX1_38_17_curated
RAAC_Alphaproteobacteria_38_40_13_30
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

34673..37063
DNA (2391bp) protein (797aa)
PKD domain containing protein n=1 Tax=Methylomonas methanica (strain MC09) RepID=G0A1A0_METMM
PKD domain-containing protein Tax=GWF2_RBX1_38_17_curated
PKD domain-containing protein
Displaying items 1-30 of 72 in total

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