ggKbase home page

RAAC_Alphaproteobacteria_38_40_16

Search features with annotation key words

Displaying items 1-30 of 82 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RAAC_Alphaproteobacteria_38_40_16_1
Leptotrichia hofstadii, Leptotrichia, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

199..1236
DNA (1038bp) protein (346aa)
Type III restriction-modification system methylation subunit (EC:2.1.1.72)
DNA (Cytosine-5-)-methyltransferase n=1 Tax=Leptotrichia hofstadii F0254 RepID=C9N0B8_9FUSO rbh
DNA (Cytosine-5-)-methyltransferase {ECO:0000313|EMBL:EEX73605.1}; TaxID=634994 species="Bacteria; Fusobacteria; Fusobacteriales; Leptotrichiaceae; Leptotrichia.;" source="Leptotrichia hofstadii F0254
RAAC_Alphaproteobacteria_38_40_16_2
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

1288..4362
DNA (3075bp) protein (1025aa)
Type III site-specific deoxyribonuclease n=1 Tax=Desulfotomaculum nigrificans DSM 574 RepID=F0DN80_9FIRM rbh
Type III restriction enzyme, res subunit:DEAD/DEAH box helicase, N-terminal Tax=GWF2_RBX1_38_17_curated
Type III restriction enzyme, res subunit:DEAD/DEAH box helicase, N-terminal
RAAC_Alphaproteobacteria_38_40_16_3
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

4487..5032
DNA (546bp) protein (182aa)
hypothetical protein n=1 Tax=Omnitrophica bacterium SCGC AAA252-B19 RepID=UPI000375C847
RNA methylase Tax=GWF2_RBX1_38_17_curated
RNA methylase
RAAC_Alphaproteobacteria_38_40_16_4
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

5029..5508
DNA (480bp) protein (160aa)
coaD; phosphopantetheine adenylyltransferase (EC:2.7.7.3); K00954 pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] Tax=GWF2_RBX1_38_17_curated
coaD; phosphopantetheine adenylyltransferase (EC:2.7.7.3)
Phosphopantetheine adenylyltransferase n=6 Tax=Thermoanaerobacter RepID=COAD_THEP3
RAAC_Alphaproteobacteria_38_40_16_5
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

5523..6017
DNA (495bp) protein (165aa)
id=1836373 Tax=GWF2_RBX1_38_17_curated
RAAC_Alphaproteobacteria_38_40_16_6
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

6058..6774
DNA (717bp) protein (239aa)
ribonuclease PH (EC:2.7.7.56); K00989 ribonuclease PH [EC:2.7.7.56] Tax=GWF2_RBX1_38_17_curated
ribonuclease PH (EC:2.7.7.56)
ribonuclease PH n=1 Tax=beta proteobacterium L13 RepID=UPI0003736509 rbh
RAAC_Alphaproteobacteria_38_40_16_7
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

6785..7312
DNA (528bp) protein (176aa)
shikimate kinase (EC:2.7.1.71); K00891 shikimate kinase [EC:2.7.1.71] Tax=GWF2_RBX1_38_17_curated
shikimate kinase (EC:2.7.1.71)
Shikimate kinase n=1 Tax=Roseburia sp. CAG:45 RepID=R6PMD1_9FIRM
RAAC_Alphaproteobacteria_38_40_16_8
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

7305..8459
DNA (1155bp) protein (385aa)
3-dehydroquinate synthase (EC:4.2.3.4)
3-dehydroquinate synthase n=1 Tax=Nostoc sp. (strain ATCC 29411 / PCC 7524) RepID=K9QRP4_NOSS7 rbh
3-dehydroquinate synthase Tax=GWF2_RBX1_38_17_curated
RAAC_Alphaproteobacteria_38_40_16_9
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

8456..8890
DNA (435bp) protein (145aa)
3-dehydroquinate dehydratase n=1 Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KHG6_9FIRM
3-dehydroquinate dehydratase, type II Tax=GWF2_RBX1_38_17_curated
3-dehydroquinate dehydratase, type II
RAAC_Alphaproteobacteria_38_40_16_10
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

8939..9682
DNA (744bp) protein (248aa)
Peptidase M24 n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TR24_ALKMQ
peptidase M24 Tax=GWF2_RBX1_38_17_curated
peptidase M24
RAAC_Alphaproteobacteria_38_40_16_11
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

9745..11565
DNA (1821bp) protein (607aa)
Two-component sensor kinase n=1 Tax=planctomycete KSU-1 RepID=I3IJN9_9PLAN rbh
sensory transduction histidine kinase Tax=GWF2_RBX1_38_17_curated
sensory transduction histidine kinase
RAAC_Alphaproteobacteria_38_40_16_12
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

11562..12254
DNA (693bp) protein (231aa)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Halobacteroides halobius (strain ATCC 35273 / DSM 5150 / MD-1) RepID=L0K7S3_HALHC
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Tax=GWF2_RBX1_38_17_curated
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
RAAC_Alphaproteobacteria_38_40_16_13
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

12251..12718
DNA (468bp) protein (156aa)
ispF; 2-C-methyl-D-erythritol-2,4-cyclodiphosphate synthase (EC:4.6.1.12) Tax=GWF2_RBX1_38_17_curated
ispF; 2-C-methyl-D-erythritol-2,4-cyclodiphosphate synthase (EC:4.6.1.12)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Eubacterium sp. CAG:38 RepID=R7H6U4_9FIRM
RAAC_Alphaproteobacteria_38_40_16_14
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

12715..13515
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:253 RepID=R6LZS3_9CLOT
rRNA methylase; K03437 RNA methyltransferase, TrmH family Tax=GWF2_RBX1_38_17_curated
rRNA methylase
RAAC_Alphaproteobacteria_38_40_16_15
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

13586..14353
DNA (768bp) protein (256aa)
id=1836315 Tax=GWF2_RBX1_38_17_curated
RAAC_Alphaproteobacteria_38_40_16_16
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

14613..15734
DNA (1122bp) protein (374aa)
homoserine O-acetyltransferase (EC:2.3.1.31); K00641 homoserine O-acetyltransferase [EC:2.3.1.31] Tax=GWF2_RBX1_38_17_curated
homoserine O-acetyltransferase (EC:2.3.1.31)
Homoserine O-acetyltransferase n=1 Tax=Spirochaeta thermophila (strain ATCC 49972 / DSM 6192 / RI 19.B1) RepID=E0RRU7_SPITD rbh
RAAC_Alphaproteobacteria_38_40_16_17
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

15765..16397
DNA (633bp) protein (211aa)
methionine biosynthesis protein MetW Tax=GWF2_RBX1_38_17_curated
methionine biosynthesis MetW family protein alias=ACD20_103728.33129.13G0012,ACD20_103728.33129.13_12,ACD20_C00103G00012 id=20002 tax=ACD20 species=Desulfovibrio magneticus genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria organism_group=Novel_Cyano/Firm organism_desc=Novel_Cyano/Firm
methionine biosynthesis protein MetW
RAAC_Alphaproteobacteria_38_40_16_18
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

16406..17263
DNA (858bp) protein (286aa)
Putative carbohydrate kinase-like protein n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0AZ66_CLOA9
carbohydrate kinase-like protein Tax=GWF2_RBX1_38_17_curated
carbohydrate kinase-like protein
RAAC_Alphaproteobacteria_38_40_16_19
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

17256..18023
DNA (768bp) protein (256aa)
hypothetical protein n=1 Tax=Anaeromusa acidaminophila RepID=UPI000374F09D
ycf63; hypothetical protein; K02066 putative ABC transport system permease protein Tax=GWF2_RBX1_38_17_curated
protein of unknown function DUF140
RAAC_Alphaproteobacteria_38_40_16_20
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

18028..18777
DNA (750bp) protein (250aa)
Fe(3+)-transporting ATPase (EC:3.6.3.30)
ABC transporter related protein n=1 Tax=Pelosinus fermentans JBW45 RepID=I9DDJ9_9FIRM
ABC transporter; K02065 putative ABC transport system ATP-binding protein Tax=GWF2_RBX1_38_17_curated
RAAC_Alphaproteobacteria_38_40_16_21
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

18777..20126
DNA (1350bp) protein (450aa)
Mammalian cell entry related domain protein n=1 Tax=Pelosinus fermentans DSM 17108 RepID=I9M4X0_9FIRM
mce related protein Tax=GWF2_RBX1_38_17_curated
Mammalian cell entry related domain protein
RAAC_Alphaproteobacteria_38_40_16_22
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

20283..21659
DNA (1377bp) protein (459aa)
Uncharacterized protein n=1 Tax=Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1) RepID=F4LTR6_TEPAE
hypothetical protein; K09749 hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
RAAC_Alphaproteobacteria_38_40_16_23
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(21792..22334)
DNA (543bp) protein (181aa)
yfcE2; phosphodiesterase YfcE (EC:3.1.4.-) Tax=GWF2_RBX1_38_17_curated
yfcE2; phosphodiesterase YfcE (EC:3.1.4.-)
Phosphodiesterase family protein n=1 Tax=Mitsuokella sp. oral taxon 131 str. W9106 RepID=U2T9Z6_9FIRM
RAAC_Alphaproteobacteria_38_40_16_24
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(22339..22917)
DNA (579bp) protein (193aa)
Peptidase A24A prepilin type IV n=1 Tax=Bacillus bataviensis LMG 21833 RepID=K6CQN2_9BACI
cpaA; Flp pilus assembly protein, protease CpaA Tax=GWF2_RBX1_38_17_curated
cpaA; Flp pilus assembly protein, protease CpaA
RAAC_Alphaproteobacteria_38_40_16_25
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(23004..23174)
DNA (171bp) protein (57aa)
Components of type IV pilus, pilin subunit n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5BQY0_9RHIZ
Components of type IV pilus, pilin subunit Tax=GWF2_RBX1_38_17_curated
Flp/Fap pilin component; K02651 pilus assembly protein Flp/PilA
RAAC_Alphaproteobacteria_38_40_16_26
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(23262..23435)
DNA (174bp) protein (58aa)
hypothetical protein n=1 Tax=Desulfurispora thermophila RepID=UPI000360A63D
Putative uncharacterized protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein; K02651 pilus assembly protein Flp/PilA
RAAC_Alphaproteobacteria_38_40_16_27
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists


comp(23960..24151)
DNA (192bp) protein (64aa)
50S ribosomal protein L28 n=1 Tax=Caminibacter mediatlanticus TB-2 RepID=A6DD23_9PROT
rpmB; ribosomal protein L28; K02902 large subunit ribosomal protein L28 Tax=GWF2_RBX1_38_17_curated
rpmB; ribosomal protein L28
RAAC_Alphaproteobacteria_38_40_16_28
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

24570..25508
DNA (939bp) protein (313aa)
DAK2 domain fusion protein YloV n=8 Tax=Clostridium difficile RepID=G6BD82_CLODI
phosphatase Tax=GWF2_RBX1_38_17_curated
phosphatase
RAAC_Alphaproteobacteria_38_40_16_29
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

25505..25624
DNA (120bp) protein (40aa)
id=2127637 Tax=GWF2_RBX1_38_17_curated
RAAC_Alphaproteobacteria_38_40_16_30
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

25967..28042
DNA (2076bp) protein (692aa)
ATP-dependent DNA helicase RecG; K03655 ATP-dependent DNA helicase RecG [EC:3.6.4.12] Tax=GWF2_RBX1_38_17_curated
hypothetical protein n=1 Tax=Orenia marismortui RepID=UPI000363810E rbh
ATP-dependent DNA helicase RecG
Displaying items 1-30 of 82 in total

View Taxonomy