ggKbase home page

RAAC_Alphaproteobacteria_38_40_21

Search features with annotation key words

Displaying items 1-30 of 44 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RAAC_Alphaproteobacteria_38_40_21_1
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(441..911)
DNA (471bp) protein (157aa)
Phospholipase D/Transphosphatidylase n=1 Tax=Hydrogenobacter thermophilus (strain DSM 6534 / IAM 12695 / TK-6) RepID=D3DKB4_HYDTT
phospholipase D/Transphosphatidylase Tax=GWF2_RBX1_38_17_curated
putative endonuclease
RAAC_Alphaproteobacteria_38_40_21_2
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(1418..2275)
DNA (858bp) protein (286aa)
ParB-like partition protein n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9LBJ6_9FIRM
stage 0 sporulation protein J; K03497 chromosome partitioning protein, ParB family Tax=GWF2_RBX1_38_17_curated
spo0J; Stage 0 sporulation protein J
RAAC_Alphaproteobacteria_38_40_21_3
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(2265..3026)
DNA (762bp) protein (254aa)
Cobyrinic acid ac-diamide synthase n=1 Tax=Clostridium sp. CAG:571 RepID=R5YH49_9CLOT rbh
soj1; sporulation initiation inhibitor protein Soj Tax=GWF2_RBX1_38_17_curated
soj1; sporulation initiation inhibitor protein Soj
RAAC_Alphaproteobacteria_38_40_21_4
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(3030..3740)
DNA (711bp) protein (237aa)
methyltransferase GidB; K03501 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] Tax=GWF2_RBX1_38_17_curated
Ribosomal RNA small subunit methyltransferase G n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C5A1_9FIRM
methyltransferase GidB
RAAC_Alphaproteobacteria_38_40_21_5
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(3765..4283)
DNA (519bp) protein (173aa)
DNA polymerase beta domain protein region n=1 Tax=Methanoplanus limicola DSM 2279 RepID=H1YZL2_9EURY
DNA polymerase beta domain protein region Tax=GWF2_RBX1_38_17_curated
RAAC_Alphaproteobacteria_38_40_21_6
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(4421..6295)
DNA (1875bp) protein (625aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=2 Tax=Desulfotomaculum RepID=F6B6S7_DESCC rbh
tRNA uridine 5-carboxymethylaminomethyl modification protein MnmG; K03495 tRNA uridine 5-carboxymethylaminomethyl modification enzyme Tax=GWF2_RBX1_38_17_curated
tRNA uridine 5-carboxymethylaminomethyl modification protein MnmG
RAAC_Alphaproteobacteria_38_40_21_7
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(6316..7500)
DNA (1185bp) protein (395aa)
id=1993339 Tax=GWF2_RBX1_38_17_curated
RAAC_Alphaproteobacteria_38_40_21_8
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

7703..8704
DNA (1002bp) protein (334aa)
gap; glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.-); K00134 glyceraldehyde 3-phosphate dehydrogenase [EC:1.2.1.12] Tax=GWF2_RBX1_38_17_curated
gap; glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.-)
Glyceraldehyde-3-phosphate dehydrogenase (NAD+) n=2 Tax=Leptonema illini RepID=H2CH34_9LEPT rbh
RAAC_Alphaproteobacteria_38_40_21_9
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(8785..9897)
DNA (1113bp) protein (371aa)
ABC-2 type transporter n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XYQ8_9BACT rbh
ABC transporter; K09686 antibiotic transport system permease protein Tax=GWF2_RBX1_38_17_curated
ABC transporter
RAAC_Alphaproteobacteria_38_40_21_10
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(9890..10996)
DNA (1107bp) protein (369aa)
ABC-2 type transporter n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XYQ9_9BACT rbh
ABC transporter; K09686 antibiotic transport system permease protein Tax=GWF2_RBX1_38_17_curated
ABC transporter
RAAC_Alphaproteobacteria_38_40_21_11
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(10996..11730)
DNA (735bp) protein (245aa)
ABC transporter related protein n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XYR0_9BACT rbh
ABC transporter; K01990 ABC-2 type transport system ATP-binding protein Tax=GWF2_RBX1_38_17_curated
ABC transporter
RAAC_Alphaproteobacteria_38_40_21_12
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(11735..12649)
DNA (915bp) protein (305aa)
ABC transporter related protein n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XYR1_9BACT rbh
ABC transporter Tax=GWF2_RBX1_38_17_curated
ABC transporter
RAAC_Alphaproteobacteria_38_40_21_13
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(12656..13540)
DNA (885bp) protein (295aa)
Secretion protein HlyD family protein n=1 Tax=Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228) RepID=E1R2H2_SPISS
secretion protein HlyD; K01993 HlyD family secretion protein Tax=GWF2_RBX1_38_17_curated
secretion protein HlyD
RAAC_Alphaproteobacteria_38_40_21_14
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(13540..14805)
DNA (1266bp) protein (422aa)
Outer membrane efflux protein n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XYR3_9BACT
outer membrane efflux protein Tax=GWF2_RBX1_38_17_curated
outer membrane efflux protein
RAAC_Alphaproteobacteria_38_40_21_15
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(14823..15458)
DNA (636bp) protein (212aa)
hypothetical protein n=1 Tax=Spirochaeta bajacaliforniensis RepID=UPI00036905A1
TetR family transcriptional regulator Tax=GWF2_RBX1_38_17_curated
TetR family transcriptional regulator
RAAC_Alphaproteobacteria_38_40_21_16
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

15890..16798
DNA (909bp) protein (303aa)
Putative Co/Zn/Cd cation transporter n=1 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0H9Z7_METFS
putative Co/Zn/Cd cation transporter Tax=GWF2_RBX1_38_17_curated
putative Co/Zn/Cd cation transporter
RAAC_Alphaproteobacteria_38_40_21_17
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(16799..17764)
DNA (966bp) protein (322aa)
UDP-glucose 4-epimerase (EC:5.1.3.2) alias=gwa2_scaffold_192_116 id=5042154 tax=GW2011_AR5 species=unknown genus=Methylophaga taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria organism_desc=gwa2_.48_18
UDP-glucose 4-epimerase (EC:5.1.3.2)
NAD-dependent epimerase/dehydratase Tax=GWF2_RBX1_38_17_curated
RAAC_Alphaproteobacteria_38_40_21_18
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

18154..18831
DNA (678bp) protein (226aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase; K00655 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] Tax=GWF2_RBX1_38_17_curated
Acyltransferase family protein n=1 Tax=Desulfosporosinus sp. OT RepID=G2FLF4_9FIRM
1-acyl-sn-glycerol-3-phosphate acyltransferase
RAAC_Alphaproteobacteria_38_40_21_19
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(18882..19223)
DNA (342bp) protein (114aa)
Nitrogen regulatory protein PII n=1 Tax=uncultured bacterium RepID=K1XRK1_9BACT
nitrogen regulatory protein PII; K04751 nitrogen regulatory protein P-II 1 Tax=GWF2_RBX1_38_17_curated
nitrogen regulatory protein PII
RAAC_Alphaproteobacteria_38_40_21_20
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(19236..20546)
DNA (1311bp) protein (437aa)
ammonium transporter; K03320 ammonium transporter, Amt family Tax=GWF2_RBX1_38_17_curated
sat:SYN_02211 ammonium transporter; K03320 ammonium transporter, Amt family alias=ACD79_29594.5458.19G0003,ACD79_29594.5458.19_3,ACD79_C00630G00003 id=129131 tax=ACD79 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria organism_group=Chlamydiae organism_desc=Novel, branching deeply from Chlamydiae rbh
ammonium transporter
RAAC_Alphaproteobacteria_38_40_21_21
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(20872..21462)
DNA (591bp) protein (197aa)
id=1993402 Tax=GWF2_RBX1_38_17_curated
RAAC_Alphaproteobacteria_38_40_21_22
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

21846..22133
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Geobacter sp. (strain M21) RepID=C6E3C5_GEOSM
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
RAAC_Alphaproteobacteria_38_40_21_23
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

22390..23280
DNA (891bp) protein (297aa)
nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; K12251 N-carbamoylputrescine amidase [EC:3.5.1.53] Tax=GWF2_RBX1_38_17_curated
N-carbamoylputrescine amidase n=1 Tax=Sulfurihydrogenibium yellowstonense SS-5 RepID=C4FIN3_9AQUI rbh
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase rbh
RAAC_Alphaproteobacteria_38_40_21_24
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

23307..24371
DNA (1065bp) protein (355aa)
agmatine deiminase (EC:3.5.3.12); K10536 agmatine deiminase [EC:3.5.3.12] Tax=GWF2_RBX1_38_17_curated
Agmatine deiminase (EC:3.5.3.12)
Agmatine deiminase n=1 Tax=Sulfurihydrogenibium yellowstonense SS-5 RepID=C4FL04_9AQUI rbh
RAAC_Alphaproteobacteria_38_40_21_25
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(24378..24809)
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9P6R8_9DELT
Uncharacterized protein Tax=GWF2_RBX1_38_17_curated
RAAC_Alphaproteobacteria_38_40_21_26
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

24934..25470
DNA (537bp) protein (179aa)
Heme/steroid binding domain protein n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BHU1_CLOPF
heme/steroid binding domain protein Tax=GWF2_RBX1_38_17_curated
heme/steroid binding domain-containing protein
RAAC_Alphaproteobacteria_38_40_21_27
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

25559..26167
DNA (609bp) protein (203aa)
id=1993410 Tax=GWF2_RBX1_38_17_curated
RAAC_Alphaproteobacteria_38_40_21_28
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(26192..27109)
DNA (918bp) protein (306aa)
Dockerin type 1 n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=F1T8L7_9CLOT alias=scaffold_2_110,RBG2_C00002G00110 id=1241392 tax=RBG2 species=Clostridium papyrosolvens genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes
ChW repeat-containing protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
RAAC_Alphaproteobacteria_38_40_21_trna_1
unknown

Not on your lists

comp(27250..27334)
DNA (85bp)
transferRNA
RAAC_Alphaproteobacteria_38_40_21_29
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(27477..28823)
DNA (1347bp) protein (449aa)
Histidine kinase A domain protein n=1 Tax=Calditerrivibrio nitroreducens (strain DSM 19672 / NBRC 101217 / Yu37-1) RepID=E4TJQ0_CALNY
histidine kinase a domain protein Tax=GWF2_RBX1_38_17_curated
histidine kinase a domain-containing protein
Displaying items 1-30 of 44 in total

View Taxonomy