ggKbase home page

RBG_13_CP_61_14_RBG_13_scaffold_466

Search features with annotation key words

Displaying items 1-30 of 173 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_13_CP_61_14_RBG_13_scaffold_466_1
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..1043
DNA (1041bp) protein (347aa)
ahcY; adenosylhomocysteinase (EC:3.3.1.1); K01251 adenosylhomocysteinase [EC:3.3.1.1] Tax=RBG_13_Deltaproteobacteria_61_14_curated
ahcY; adenosylhomocysteinase (EC:3.3.1.1)
Adenosylhomocysteinase id=2244002 bin=GWB2_Nitrospirae_rel_47_37 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
RBG_13_CP_61_14_RBG_13_scaffold_466_2
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1671..4220)
DNA (2550bp) protein (850aa)
spermine/spermidine synthase; K00797 spermidine synthase [EC:2.5.1.16] Tax=RBG_13_Deltaproteobacteria_61_14_curated
Spermine/spermidine synthase family protein id=3979144 bin=GWC2_Methylomirabilis_70_16 species=uncultured Acidobacteria bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
spermine/spermidine synthase-like protein
RBG_13_CP_61_14_RBG_13_scaffold_466_3
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4225..4623)
DNA (399bp) protein (133aa)
spermine synthase; K00797 spermidine synthase [EC:2.5.1.16] Tax=RBG_13_Deltaproteobacteria_61_14_curated
Spermine synthase n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8JE28_ANAD2
spermine synthase
RBG_13_CP_61_14_RBG_13_scaffold_466_4
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4620..5117)
DNA (498bp) protein (166aa)
RfaE bifunctional protein n=1 Tax=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) RepID=B3QUE4_CHLT3
RfaE bifunctional protein Tax=RBG_13_Deltaproteobacteria_61_14_curated
RfaE bifunctional protein
RBG_13_CP_61_14_RBG_13_scaffold_466_5
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5089..7257)
DNA (2169bp) protein (723aa)
Uncharacterized protein n=1 Tax=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) RepID=B5EFL6_GEOBB
hypothetical protein Tax=RBG_13_Deltaproteobacteria_61_14_curated
hypothetical protein
RBG_13_CP_61_14_RBG_13_scaffold_466_6
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7254..8195)
DNA (942bp) protein (314aa)
undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase (EC:2.7.8.-) Tax=RBG_13_Deltaproteobacteria_61_14_curated
undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase (EC:2.7.8.-)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2BR32_9BACT
RBG_13_CP_61_14_RBG_13_scaffold_466_7
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8198..9796)
DNA (1599bp) protein (533aa)
glycosyl transferase family protein Tax=RBG_13_Deltaproteobacteria_61_14_curated
transmembrane_regions 17..39 id=47206 bin=ACD39 species=ACD39 genus=ACD39 taxon_order=ACD39 taxon_class=ACD39 phylum=unknown tax=ACD39 organism_group=Unknown_CP organism_desc=unknown
glycosyl transferase family protein
RBG_13_CP_61_14_RBG_13_scaffold_466_8
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9902..10342)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Simiduia agarivorans (strain DSM 21679 / JCM 13881 / BCRC 17597 / SA1) RepID=K4L299_SIMAS
hypothetical protein Tax=RBG_13_Deltaproteobacteria_61_14_curated
hypothetical protein
RBG_13_CP_61_14_RBG_13_scaffold_466_9
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10781..12016)
DNA (1236bp) protein (412aa)
Rhomboid-like protein n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JZ12_DESAC
Uncharacterized membrane protein (homolog of Drosophila rhomboid) Tax=RBG_13_Deltaproteobacteria_61_14_curated
Uncharacterized membrane protein (homolog of Drosophila rhomboid)
RBG_13_CP_61_14_RBG_13_scaffold_466_10
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12379..12984
DNA (606bp) protein (202aa)
Tax=RBG_13_Deltaproteobacteria_61_14_curated
RBG_13_CP_61_14_RBG_13_scaffold_466_11
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13050..13412)
DNA (363bp) protein (121aa)
hypothetical protein Tax=RBG_13_Deltaproteobacteria_61_14_curated
Similar to tr|Q3WHC0|Q3WHC0_9ACTO Hypothetical protein id=3926393 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Microcystis aeruginosa genus=Microcystis taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
hypothetical protein
RBG_13_CP_61_14_RBG_13_scaffold_466_12
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13414..13638)
DNA (225bp) protein (75aa)
hypothetical protein Tax=RBG_13_Deltaproteobacteria_61_14_curated
Uncharacterized protein id=4837745 bin=GWC2_Deltaproteobacteria_66_88 species=Nitrolancetus hollandicus genus=Nitrolancetus taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Deltaproteobacteria_66_88 organism_group=Deltaproteobacteria
hypothetical protein
RBG_13_CP_61_14_RBG_13_scaffold_466_13
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13700..13990)
DNA (291bp) protein (97aa)
Tax=RBG_13_Deltaproteobacteria_61_14_curated
RBG_13_CP_61_14_RBG_13_scaffold_466_14
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13987..14586)
DNA (600bp) protein (200aa)
hypothetical protein n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI00035EF601
hypothetical protein Tax=RBG_13_Deltaproteobacteria_61_14_curated
RBG_13_CP_61_14_RBG_13_scaffold_466_15
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14759..18328)
DNA (3570bp) protein (1190aa)
Uncharacterized protein n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2ND43_DESAR
hypothetical protein Tax=RBG_13_Deltaproteobacteria_61_14_curated
hypothetical protein
RBG_13_CP_61_14_RBG_13_scaffold_466_16
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18885..19118
DNA (234bp) protein (78aa)
Tax=RBG_13_Deltaproteobacteria_61_14_curated
RBG_13_CP_61_14_RBG_13_scaffold_466_17
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19131..19406
DNA (276bp) protein (92aa)
Integration host factor subunit alpha n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=IHFA_ANADF
integration host factor subunit alpha; K04764 integration host factor subunit alpha Tax=RBG_13_Deltaproteobacteria_61_14_curated
ihfA; integration host factor subunit alpha
RBG_13_CP_61_14_RBG_13_scaffold_466_18
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19652..21316)
DNA (1665bp) protein (555aa)
AMP-dependent synthetase/ligase; K01897 long-chain acyl-CoA synthetase [EC:6.2.1.3] Tax=RBG_13_Deltaproteobacteria_61_14_curated
AMP-dependent synthetase and ligase n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NP89_ROSCS
AMP-dependent synthetase/ligase
RBG_13_CP_61_14_RBG_13_scaffold_466_19
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21321..21749)
DNA (429bp) protein (143aa)
UPI0003D1AA8D related cluster n=1 Tax=unknown RepID=UPI0003D1AA8D
HNH endonuclease Tax=RBG_13_Deltaproteobacteria_61_14_curated
putative membrane protein
RBG_13_CP_61_14_RBG_13_scaffold_466_20
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21749..22981)
DNA (1233bp) protein (411aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1ZRA9_9BACT
hypothetical protein Tax=RBG_13_Deltaproteobacteria_61_14_curated
hypothetical protein
RBG_13_CP_61_14_RBG_13_scaffold_466_21
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23014..23892)
DNA (879bp) protein (293aa)
UbiA prenyltransferase Tax=RBG_13_Deltaproteobacteria_61_14_curated
Putative conserved membrane protein id=4811706 bin=GWC2_Methylomirabilis_70_24 species=uncultured Acidobacteria bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
UbiA prenyltransferase
RBG_13_CP_61_14_RBG_13_scaffold_466_22
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23889..24581)
DNA (693bp) protein (231aa)
Transferase hexapeptide repeat containing protein n=1 Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=B8G5M9_CHLAD
transferase hexapeptide repeat containing protein Tax=RBG_13_Deltaproteobacteria_61_14_curated
transferase hexapeptide repeat containing protein
RBG_13_CP_61_14_RBG_13_scaffold_466_23
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24596..25594)
DNA (999bp) protein (333aa)
glycosyl transferase family protein Tax=RBG_13_Deltaproteobacteria_61_14_curated
Putative uncharacterized protein id=3962801 bin=GWA2_Elusimicrobia_69_24 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
glycosyl transferase family protein
RBG_13_CP_61_14_RBG_13_scaffold_466_24
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25594..26991)
DNA (1398bp) protein (466aa)
cobalamin B12-binding domain-containing protein Tax=RBG_13_Deltaproteobacteria_61_14_curated
Uncharacterized methyltransferase PH0819 id=4679884 bin=GWC2_Elusimicrobia_51_8 species=ACD79 genus=ACD79 taxon_order=ACD79 taxon_class=ACD79 phylum=Clamydiae tax=GWC2_Elusimicrobia_51_8 organism_group=Elusimicrobia
cobalamin B12-binding domain-containing protein
RBG_13_CP_61_14_RBG_13_scaffold_466_25
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26988..27851)
DNA (864bp) protein (288aa)
Glycosyl transferase family 2 n=1 Tax=Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228) RepID=E1R9Y7_SPISS
family 2 glycosyl transferase Tax=RBG_13_Deltaproteobacteria_61_14_curated
family 2 glycosyl transferase
RBG_13_CP_61_14_RBG_13_scaffold_466_26
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27848..29677)
DNA (1830bp) protein (610aa)
Tax=RBG_13_Deltaproteobacteria_61_14_curated
RBG_13_CP_61_14_RBG_13_scaffold_466_27
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29664..30581)
DNA (918bp) protein (306aa)
NAD-dependent epimerase/dehydratase; K01784 UDP-glucose 4-epimerase [EC:5.1.3.2] Tax=RBG_13_Deltaproteobacteria_61_14_curated
NAD-dependent epimerase/dehydratase n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JLX7_9GAMM
NAD-dependent epimerase/dehydratase
RBG_13_CP_61_14_RBG_13_scaffold_466_28
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30578..31867)
DNA (1290bp) protein (430aa)
Glycosyltransferase n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1P501_DESSD
glycosyltransferase Tax=RBG_13_Deltaproteobacteria_61_14_curated
glycosyltransferase
RBG_13_CP_61_14_RBG_13_scaffold_466_29
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32008..32757
DNA (750bp) protein (250aa)
Purine or other phosphorylase family 1 n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NIM3_DESAR
purine or other phosphorylase 1 Tax=RBG_13_Deltaproteobacteria_61_14_curated
purine or other phosphorylase 1
RBG_13_CP_61_14_RBG_13_scaffold_466_30
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32754..33401
DNA (648bp) protein (216aa)
AHBA synthesis associated protein n=1 Tax=Frankia sp. (strain EAN1pec) RepID=A8LCT1_FRASN
AHBA synthesis associated protein; K16017 AHBA synthesis associated protein Tax=RBG_13_Deltaproteobacteria_61_14_curated
AHBA synthesis associated protein
Displaying items 1-30 of 173 in total

View Taxonomy