ggKbase home page

RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_729

Search features with annotation key words

Displaying 27 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_729_1
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(161..3994)
DNA (3834bp) protein (1278aa)
serine/threonine protein kinase Tax=RBG_13_Deltaproteobacteria_43_22_curated
sus:Acid_5780 serine/threonine protein kinase id=1242325 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
serine/threonine protein kinase
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_729_2
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4428..4697
DNA (270bp) protein (90aa)
Histone family protein DNA-binding protein n=1 Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FBD5_DESAA
histone family protein DNA-binding protein; K03530 DNA-binding protein HU-beta Tax=RBG_13_Deltaproteobacteria_43_22_curated
histone family protein DNA-binding protein
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_729_3
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4898..5563
DNA (666bp) protein (222aa)
Conserved uncharacterized protein, DUF374 n=1 Tax=Desulfobacula toluolica (strain DSM 7467 / Tol2) RepID=K0NJW1_DESTT
hypothetical protein Tax=RBG_13_Deltaproteobacteria_43_22_curated
hypothetical protein
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_729_4
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5894..6664)
DNA (771bp) protein (257aa)
Putative PAS/PAC sensor protein n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GCV2_GEOUR
putative PAS/PAC sensor protein Tax=RBG_13_Deltaproteobacteria_43_22_curated
putative PAS/PAC sensor protein
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_729_5
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6956..8104)
DNA (1149bp) protein (383aa)
acyl-CoA dehydrogenase, short-chain specific (EC:1.3.99.2) Tax=RBG_13_Deltaproteobacteria_43_22_curated
hypothetical protein n=1 Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI00035F8B10
acyl-CoA dehydrogenase, short-chain specific
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_729_6
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8120..8890)
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=Mycobacterium rhodesiae (strain NBB3) RepID=G8RXJ2_MYCRN
dehydrogenase Tax=RBG_13_Deltaproteobacteria_43_22_curated
dehydrogenase
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_729_7
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8977..10428)
DNA (1452bp) protein (484aa)
Acyl-CoA synthetase (NDP forming) n=1 Tax=uncultured delta proteobacterium RepID=Q2YZQ4_9DELT
CoA-binding domain-containing protein Tax=RBG_13_Deltaproteobacteria_43_22_curated
CoA-binding domain-containing protein
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_729_8
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10652..11848
DNA (1197bp) protein (399aa)
Est22 n=1 Tax=uncultured bacterium RepID=S5Y3D1_9BACT
beta-lactamase Tax=RBG_13_Deltaproteobacteria_43_22_curated
beta-lactamase
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_729_9
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12081..13097
DNA (1017bp) protein (339aa)
Amidohydrolase family protein n=1 Tax=Hyphomonas neptunium (strain ATCC 15444) RepID=Q0C2C7_HYPNA
amidohydrolase family protein Tax=RBG_13_Deltaproteobacteria_43_22_curated
amidohydrolase family protein
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_729_10
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13183..15969)
DNA (2787bp) protein (929aa)
pyruvate phosphate dikinase Tax=RBG_13_Deltaproteobacteria_43_22_curated
Phosphoenolpyruvate synthase/pyruvate phosphate dikinase id=1955179 bin=GWB2_Nitrospirae_rel_47_37 species=Desulfatibacillum alkenivorans genus=Desulfatibacillum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
pyruvate phosphate dikinase
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_729_11
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16110..17093)
DNA (984bp) protein (328aa)
3-oxoacyl-(acyl-carrier-protein) synthase III (EC:2.3.1.41); K00648 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] Tax=RBG_13_Deltaproteobacteria_43_22_curated
3-oxoacyl-(acyl-carrier-protein) synthase III (EC:2.3.1.41)
3-oxoacyl-[acyl-carrier-protein] synthase 3 n=1 Tax=delta proteobacterium NaphS2 RepID=D8EYD6_9DELT
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_729_12
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17273..18373)
DNA (1101bp) protein (367aa)
Peptidase M15A n=1 Tax=Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM B-2133 / 20Z) RepID=G4SWE3_META2
peptidase M15A Tax=RBG_13_Deltaproteobacteria_43_22_curated
peptidase M15A
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_729_13
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18746..19480
DNA (735bp) protein (245aa)
Transcriptional regulator, GntR family n=1 Tax=Bacillus selenitireducens (strain ATCC 700615 / DSM 15326 / MLS10) RepID=D6XVV2_BACIE
GntR family transcriptional regulator; K03710 GntR family transcriptional regulator Tax=RBG_13_Deltaproteobacteria_43_22_curated
GntR family transcriptional regulator
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_729_14
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19688..21433
DNA (1746bp) protein (582aa)
Methylmalonyl-CoA mutase, large subunit n=1 Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FEL8_DESAA
methylmalonyl-CoA mutase large subunit Tax=RBG_13_Deltaproteobacteria_43_22_curated
methylmalonyl-CoA mutase large subunit
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_729_15
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21441..23264
DNA (1824bp) protein (608aa)
hypothetical protein n=1 Tax=Salinispora pacifica RepID=UPI000365A8DD
radical SAM family protein Tax=RBG_13_Deltaproteobacteria_43_22_curated
radical SAM family protein
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_729_16
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23539..23961
DNA (423bp) protein (141aa)
methylmalonyl-CoA mutase domain-containing protein; K01849 methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2] Tax=RBG_13_Deltaproteobacteria_43_22_curated
Methylmalonyl-CoA mutase domain protein n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CPT7_DESK7
methylmalonyl-CoA mutase domain-containing protein
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_729_17
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23958..24755
DNA (798bp) protein (266aa)
Enoyl-CoA hydratase/isomerase (AssJ1) n=1 Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FFM8_DESAA
enoyl-CoA hydratase/isomerase Tax=RBG_13_Deltaproteobacteria_43_22_curated
enoyl-CoA hydratase/isomerase
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_729_18
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24829..26187
DNA (1359bp) protein (453aa)
Putative MmgE/PrpD family protein n=1 Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FEM0_DESAA
MmgE/PrpD family protein Tax=RBG_13_Deltaproteobacteria_43_22_curated
MmgE/PrpD family protein
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_729_19
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26252..27439
DNA (1188bp) protein (396aa)
L-carnitine dehydratase/bile acid-inducible protein F n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LJB8_SYNFM
L-carnitine dehydratase/bile acid-inducible protein F Tax=RBG_13_Deltaproteobacteria_43_22_curated
L-carnitine dehydratase/bile acid-inducible protein F
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_729_20
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27445..28422
DNA (978bp) protein (326aa)
LAO/AO transport system ATPase; K07588 LAO/AO transport system kinase [EC:2.7.-.-] Tax=RBG_13_Deltaproteobacteria_43_22_curated
Putative LAO/AO transport system ATPase n=1 Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FEL9_DESAA
LAO/AO transport system ATPase
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_729_21
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28919..29629)
DNA (711bp) protein (237aa)
Tax=RBG_13_Deltaproteobacteria_43_22_curated
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_729_22
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29930..31897)
DNA (1968bp) protein (656aa)
PAS/PAC sensor hybrid histidine kinase n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NI41_DESAR
PAS/PAC sensor hybrid histidine kinase Tax=RBG_13_Deltaproteobacteria_43_22_curated
PAS/PAC sensor hybrid histidine kinase
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_729_23
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32291..32752
DNA (462bp) protein (154aa)
Flavodoxin n=1 Tax=delta proteobacterium NaphS2 RepID=D8F279_9DELT
flavodoxin Tax=RBG_13_Deltaproteobacteria_43_22_curated
flavodoxin
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_729_24
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33163..34560
DNA (1398bp) protein (466aa)
GlcD; FAD/FMN-containing dehydrogenase; K00104 glycolate oxidase [EC:1.1.3.15] Tax=RBG_13_Deltaproteobacteria_43_22_curated
FAD linked oxidase domain protein id=4678051 bin=GWC2_Syntrophobacterales_56_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
GlcD; FAD/FMN-containing dehydrogenase
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_729_25
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34740..36146)
DNA (1407bp) protein (469aa)
Uncharacterized protein n=1 Tax=Thermococcus sp. CL1 RepID=I3ZVY0_9EURY
hypothetical protein Tax=RBG_13_Deltaproteobacteria_43_22_curated
hypothetical protein
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_729_26
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36281..36499)
DNA (219bp) protein (73aa)
Tax=RBG_13_Deltaproteobacteria_43_22_curated
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_729_27
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36477..36647)
DNA (171bp) protein (57aa)
Tax=RBG_13_Deltaproteobacteria_43_22_curated
Displaying 27 items

View Taxonomy