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RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_18

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Displaying items 1-30 of 138 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_18_1
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

160..828
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9L656_9SPHN
hypothetical protein Tax=RBG_13_Deltaproteobacteria_43_22_curated
hypothetical protein
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_18_2
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

806..1729
DNA (924bp) protein (308aa)
hypothetical protein Tax=RBG_13_Deltaproteobacteria_43_22_curated
Uncharacterized protein id=4682741 bin=GWA2_Deltaproteo_65_63 species=Bordetella bronchiseptica genus=Bordetella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria
hypothetical protein
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_18_3
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1824..4862)
DNA (3039bp) protein (1013aa)
hypothetical protein Tax=RBG_13_Deltaproteobacteria_43_22_curated
Import inner membrane translocase subunit Tim44 id=3581115 bin=GWF2_Lentisphaerae_50_93 species=ACD12 genus=ACD12 taxon_order=ACD12 taxon_class=ACD12 phylum=OP11 tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
protein of unknown function
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_18_4
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4925..5194)
DNA (270bp) protein (90aa)
protein of unknown function
hypothetical protein Tax=RBG_13_Deltaproteobacteria_43_22_curated
hypothetical protein id=4530872 bin=GWA2_Elusi_like_61_42 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusi_like_61_42 organism_group=Elusimicrobia organism_desc=Possibly not Elusi
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_18_5
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5737..6294)
DNA (558bp) protein (186aa)
hypothetical protein; K03744 LemA protein Tax=RBG_13_Deltaproteobacteria_43_22_curated
LemA family protein; K03744 LemA protein id=1242614 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
LemA family protein
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_18_6
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6686..7423)
DNA (738bp) protein (246aa)
Purine and other phosphorylases, family 1 n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LI68_SYNFM
purine phosphorylase family protein 1 Tax=RBG_13_Deltaproteobacteria_43_22_curated
purine phosphorylase family protein 1
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_18_7
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7426..9141)
DNA (1716bp) protein (572aa)
DNA repair protein RecN n=1 Tax=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) RepID=A8ZW86_DESOH
DNA repair protein RecN; K03631 DNA repair protein RecN (Recombination protein N) Tax=RBG_13_Deltaproteobacteria_43_22_curated
DNA repair protein RecN
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_18_8
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9559..9762)
DNA (204bp) protein (68aa)
cold-shock DNA-binding domain-containing protein; K03704 cold shock protein (beta-ribbon, CspA family) Tax=RBG_13_Deltaproteobacteria_43_22_curated
cold-shock DNA-binding domain-containing protein
Cold-shock DNA-binding protein family id=2606076 bin=GWC2_Deltaproteobacteria_56_8 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_56_8 organism_group=Deltaproteobacteria
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_18_9
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9982..11100)
DNA (1119bp) protein (373aa)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALE16 RepID=UPI000365B8E7
hypothetical protein Tax=RBG_13_Deltaproteobacteria_43_22_curated
hypothetical protein
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_18_10
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11136..12017)
DNA (882bp) protein (294aa)
Prepilin-type N-terminal cleavage/methylation domain-containing protein n=1 Tax=Desulfotignum phosphitoxidans DSM 13687 RepID=S0FZN7_9DELT
Tfp pilus assembly protein PilW Tax=RBG_13_Deltaproteobacteria_43_22_curated
Tfp pilus assembly protein PilW
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_18_11
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12019..12501)
DNA (483bp) protein (161aa)
General secretion pathway protein H n=1 Tax=delta proteobacterium NaphS2 RepID=D8FE01_9DELT
General secretion pathway protein H Tax=RBG_13_Deltaproteobacteria_43_22_curated
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_18_12
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12704..13474)
DNA (771bp) protein (257aa)
peptidase A24A domain-containing protein; K02654 leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] Tax=RBG_13_Deltaproteobacteria_43_22_curated
Type 4 prepilin-like proteins leader peptide-processing enzyme n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GEY5_GEOUR
peptidase A24A domain-containing protein
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_18_13
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13957..14565
DNA (609bp) protein (203aa)
Sua5/YciO/YrdC/YwlC family protein n=1 Tax=Desulfococcus multivorans DSM 2059 RepID=S7V8K0_DESML
Sua5/YciO/YrdC/YwlC family protein; K07566 tRNA threonylcarbamoyladenosine biosynthesis protein Tax=RBG_13_Deltaproteobacteria_43_22_curated
Sua5/YciO/YrdC/YwlC family protein
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_18_14
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14553..15458)
DNA (906bp) protein (302aa)
signal peptide peptidase SppA, 36K type (EC:3.1.3.2); K04773 protease IV [EC:3.4.21.-] Tax=RBG_13_Deltaproteobacteria_43_22_curated
signal peptide peptidase SppA, 36K type (EC:3.1.3.2)
Signal peptide peptidase A, Serine peptidase, MEROPS family S49 id=4309593 bin=GWC2_Deltaproteobacteria_42_51 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_18_15
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(15639..17423)
DNA (1785bp) protein (595aa)
30S ribosomal protein S1 n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LK49_SYNFM
30S ribosomal protein S1; K02945 small subunit ribosomal protein S1 Tax=RBG_13_Deltaproteobacteria_43_22_curated
30S ribosomal protein S1
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_18_16
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17736..18440)
DNA (705bp) protein (235aa)
cytidylate kinase; K00945 cytidylate kinase [EC:2.7.4.14] Tax=RBG_13_Deltaproteobacteria_43_22_curated
Putative bifunctional Cytidylate kinase / 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (Cytidine monophosphate kinase / Isopentenyl-diphosphate:NAD(P)+ oxidoreductase) (Cmk/ispH-like) n=1 Tax=Cloacamonas acidaminovorans (strain Evry) RepID=B0VI93_CLOAI
cytidylate kinase
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_18_17
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18531..19616)
DNA (1086bp) protein (362aa)
histidinol-phosphate aminotransferase; K00817 histidinol-phosphate aminotransferase [EC:2.6.1.9] Tax=RBG_13_Deltaproteobacteria_43_22_curated
Histidinol-phosphate aminotransferase n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LK47_SYNFM
histidinol-phosphate aminotransferase
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_18_18
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19809..20084
DNA (276bp) protein (92aa)
Histone family protein DNA-binding protein n=1 Tax=Desulfarculus baarsii (strain ATCC 33931 / DSM 2075 / VKM B-1802 / 2st14) RepID=E1QKG1_DESB2
histone family protein DNA-binding protein; K05788 integration host factor subunit beta Tax=RBG_13_Deltaproteobacteria_43_22_curated
histone family protein DNA-binding protein
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_18_19
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21106..22167
DNA (1062bp) protein (354aa)
Type IV pilus assembly protein PilM n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1P6N6_DESSD
type IV pilus assembly protein PilM Tax=RBG_13_Deltaproteobacteria_43_22_curated
type IV pilus assembly protein PilM
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_18_20
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22164..22736
DNA (573bp) protein (191aa)
Fimbrial assembly n=2 Tax=delta proteobacterium MLMS-1 RepID=Q1NQ64_9DELT
fimbrial assembly family protein; K02663 type IV pilus assembly protein PilN Tax=RBG_13_Deltaproteobacteria_43_22_curated
fimbrial assembly family protein
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_18_21
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22744..23361
DNA (618bp) protein (206aa)
Putative uncharacterized protein n=1 Tax=uncultured Desulfobacterium sp. RepID=E1YDR6_9DELT
pilO; protein PilO; K02664 type IV pilus assembly protein PilO Tax=RBG_13_Deltaproteobacteria_43_22_curated
hypothetical protein
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_18_22
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23454..23906
DNA (453bp) protein (151aa)
pilP; PilP protein; K02665 type IV pilus assembly protein PilP Tax=RBG_13_Deltaproteobacteria_43_22_curated
Putative type IV pilus assembly protein PilP id=2024185 bin=GWD2_Desulfuromonadales_54_10 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Desulfuromonadales_54_10 organism_group=Deltaproteobacteria
pilP; PilP protein
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_18_23
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24186..26132
DNA (1947bp) protein (649aa)
type II and III secretion system protein, secretin; K02666 type IV pilus assembly protein PilQ Tax=RBG_13_Deltaproteobacteria_43_22_curated
Type IV pilus secretin PilQ id=3624475 bin=GWC2_Nitrospirae_57_13 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
type II and III secretion system protein, secretin
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_18_24
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26198..26596
DNA (399bp) protein (133aa)
Tax=RBG_13_Deltaproteobacteria_43_22_curated
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_18_25
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26628..27752
DNA (1125bp) protein (375aa)
Tax=RBG_13_Deltaproteobacteria_43_22_curated
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_18_26
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27822..28484)
DNA (663bp) protein (221aa)
Putative uncharacterized protein n=1 Tax=uncultured Desulfobacterium sp. RepID=E1YGJ8_9DELT
HAD-superfamily hydrolase, subfamily IA, variant 3 Tax=RBG_13_Deltaproteobacteria_43_22_curated
HAD-superfamily hydrolase, subfamily IA, variant 3
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_18_27
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28441..28638)
DNA (198bp) protein (66aa)
Tax=RBG_13_Deltaproteobacteria_43_22_curated
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_18_28
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28648..28869)
DNA (222bp) protein (74aa)
Tax=RBG_13_Deltaproteobacteria_43_22_curated
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_18_29
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29057..29332
DNA (276bp) protein (92aa)
id=3898948 Tax=RBG_13_Deltaproteobacteria_43_22_curated
id=3898948 bin=GWC2_Syntrophus__56_31 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_18_30
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29298..29600
DNA (303bp) protein (101aa)
Tax=RBG_13_Deltaproteobacteria_43_22_curated
Displaying items 1-30 of 138 in total

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