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RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_4

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Displaying items 1-30 of 157 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_4_1
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(124..513)
DNA (390bp) protein (130aa)
Tax=RBG_13_Deltaproteobacteria_43_22_curated
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_4_2
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(982..1944)
DNA (963bp) protein (321aa)
Epoxide hydrolase 2 n=1 Tax=Rhodopirellula baltica WH47 RepID=F2AUH3_RHOBT
epoxide hydrolase Tax=RBG_13_Deltaproteobacteria_43_22_curated
epoxide hydrolase
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_4_3
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2305..3120
DNA (816bp) protein (272aa)
Putative beta-ketoacyl reductase n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0Y7X1_9GAMM
rhlG; short-chain dehydrogenase/reductase SDR Tax=RBG_13_Deltaproteobacteria_43_22_curated
rhlG; short-chain dehydrogenase/reductase SDR
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_4_4
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3159..4001
DNA (843bp) protein (281aa)
Enoyl-CoA hydratase/isomerase n=1 Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FED9_DESAA
enoyl-CoA hydratase/isomerase Tax=RBG_13_Deltaproteobacteria_43_22_curated
enoyl-CoA hydratase/isomerase rbh
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_4_5
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4086..5186
DNA (1101bp) protein (367aa)
hypothetical protein Tax=RBG_13_Deltaproteobacteria_43_22_curated
Putative uncharacterized protein id=4540927 bin=GWC2_Planctomycete_KSU_39_26 species=Clostridium asparagiforme genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Planctomycete_KSU_39_26 organism_group=Planctomycetes
hypothetical protein
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_4_6
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5404..6837
DNA (1434bp) protein (478aa)
Acyl-CoA synthetase (NDP forming), large subunit n=1 Tax=Thermococcus kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1) RepID=Q5JIA8_THEKO
acyl-CoA synthetase large subunit Tax=RBG_13_Deltaproteobacteria_43_22_curated
acyl-CoA synthetase large subunit
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_4_7
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6933..7721)
DNA (789bp) protein (263aa)
Sir2 family transcriptional regulator; K12410 NAD-dependent deacetylase [EC:3.5.1.-] Tax=RBG_13_Deltaproteobacteria_43_22_curated
NAD-dependent deacetylase 2 n=1 Tax=uncultured Desulfobacterium sp. RepID=E1YLK3_9DELT id=1241326 bin=RBG2 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG2 organism_group=Chloroflexi
Sir2 family transcriptional regulator
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_4_8
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7795..8235)
DNA (441bp) protein (147aa)
Fatty acid synthase beta subunit n=1 Tax=Pseudomonas stutzeri (strain A1501) RepID=A4VH76_PSEU5
fatty acid synthase beta subunit Tax=RBG_13_Deltaproteobacteria_43_22_curated
fatty acid synthase subunit beta
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_4_9
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8287..8865)
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Pseudomonas stutzeri (strain A1501) RepID=A4VH77_PSEU5
hypothetical protein Tax=RBG_13_Deltaproteobacteria_43_22_curated
hypothetical protein
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_4_10
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9339..9698)
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) RepID=A8ZVU1_DESOH
hypothetical protein Tax=RBG_13_Deltaproteobacteria_43_22_curated
hypothetical protein
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_4_11
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10214..12391)
DNA (2178bp) protein (726aa)
Molybdopterin oxidoreductase n=1 Tax=delta proteobacterium NaphS2 RepID=D8F902_9DELT
molybdopterin oxidoreductase Tax=RBG_13_Deltaproteobacteria_43_22_curated
molybdopterin oxidoreductase
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_4_12
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12414..12941)
DNA (528bp) protein (176aa)
DNA damage-inducible protein DinB n=1 Tax=Treponema primitia RepID=UPI0002554DC0
DinB family Tax=RBG_13_Deltaproteobacteria_43_22_curated
DinB family
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_4_13
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13364..14914)
DNA (1551bp) protein (517aa)
Biotin dependent acyl-CoA carboxylase n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TWF7_TISMK
biotin dependent acyl-CoA carboxylase Tax=RBG_13_Deltaproteobacteria_43_22_curated
biotin dependent acyl-CoA carboxylase
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_4_14
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15106..15936)
DNA (831bp) protein (277aa)
sensor with HAMP domain Tax=RBG_13_Deltaproteobacteria_43_22_curated
Integral membrane sensor signal transduction histidine kinase id=3252811 bin=GWC2_Nitrospirae_57_13 species=Desulfovibrio desulfuricans genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
sensor with HAMP domain
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_4_15
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16355..17731)
DNA (1377bp) protein (459aa)
UPI0003CE760A related cluster n=1 Tax=unknown RepID=UPI0003CE760A
glutamate-1-semialdehyde aminotransferase Tax=RBG_13_Deltaproteobacteria_43_22_curated
glutamate-1-semialdehyde aminotransferase
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_4_16
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18062..18811)
DNA (750bp) protein (250aa)
hypothetical protein Tax=RBG_13_Deltaproteobacteria_43_22_curated
Acyl-ACP thioesterase id=1745257 bin=GWB2_Bacteroidetes_32_14 species=unknown genus=Capnocytophaga taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWB2_Bacteroidetes_32_14 organism_group=Bacteroidetes organism_desc=a47
acyl-ACP thioesterase
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_4_17
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19238..20263)
DNA (1026bp) protein (342aa)
Alcohol dehydrogenase n=1 Tax=Desmospora sp. 8437 RepID=F5SKW8_9BACL
NADP-dependent oxidoreductase Tax=RBG_13_Deltaproteobacteria_43_22_curated
NADP-dependent oxidoreductase
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_4_18
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20547..20900)
DNA (354bp) protein (118aa)
Putative uncharacterized protein n=1 Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KN04_ARCVS
hypothetical protein Tax=RBG_13_Deltaproteobacteria_43_22_curated
hypothetical protein
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_4_19
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20897..21190)
DNA (294bp) protein (98aa)
DNA polymerase beta domain protein region n=1 Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KN03_ARCVS
DNA polymerase beta domain-containing protein; K07075 Tax=RBG_13_Deltaproteobacteria_43_22_curated
DNA polymerase beta domain-containing protein
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_4_20
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21663..23243)
DNA (1581bp) protein (527aa)
Predicted acyl esterase n=1 Tax=Paenibacillus polymyxa (strain E681) RepID=E0RMX8_PAEP6
acyl esterase; K06978 Tax=RBG_13_Deltaproteobacteria_43_22_curated
acyl esterase
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_4_21
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23262..24374)
DNA (1113bp) protein (371aa)
Putative benzoate-degrading protein BamI (Fragment) n=1 Tax=Clostridia bacterium enrichment culture clone BF RepID=D8WWS8_9FIRM
4Fe-4S ferredoxin Tax=RBG_13_Deltaproteobacteria_43_22_curated
4Fe-4S ferredoxin
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_4_22
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24519..25265)
DNA (747bp) protein (249aa)
dehydrogenase Tax=RBG_13_Deltaproteobacteria_43_22_curated
short-chain dehydrogenase/reductase SDR id=14626093 bin=bin7_NC10_sister species=Conexibacter woesei genus=Conexibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
dehydrogenase
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_4_23
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25262..26098)
DNA (837bp) protein (279aa)
hypothetical protein n=1 Tax=Chloroflexi bacterium SCGC AB-629-P13 RepID=UPI00035E3C42
short-chain dehydrogenase/reductase SDR Tax=RBG_13_Deltaproteobacteria_43_22_curated
short-chain dehydrogenase/reductase SDR
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_4_24
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26264..27997)
DNA (1734bp) protein (578aa)
recJ; single-stranded DNA-specific exonuclease RecJ; K07462 single-stranded-DNA-specific exonuclease [EC:3.1.-.-] Tax=RBG_13_Deltaproteobacteria_43_22_curated
Single-stranded DNA-specific exonuclease RecJ id=1871661 bin=GWB2_Proteobacteria_55_19 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
recJ; single-stranded DNA-specific exonuclease RecJ
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_4_25
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28277..29671
DNA (1395bp) protein (465aa)
L-seryl-tRNA selenium transferase (EC:2.9.1.1); K01042 L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] Tax=RBG_13_Deltaproteobacteria_43_22_curated
L-seryl-tRNA selenium transferase (EC:2.9.1.1)
L-seryl-tRNA(Sec) selenium transferase n=1 Tax=Thermodesulfatator indicus (strain DSM 15286 / JCM 11887 / CIR29812) RepID=F8AAM9_THEID
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_4_26
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29710..30474)
DNA (765bp) protein (255aa)
hypothetical protein
hypothetical protein PflaJ_07675 Tax=RBG_13_Deltaproteobacteria_43_22_curated
hypothetical protein PflaJ_07675 id=4222354 bin=GWC2_Deltaproteobacteria_56_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Deltaproteobacteria_56_8 organism_group=Deltaproteobacteria
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_4_27
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30588..30962)
DNA (375bp) protein (125aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1JC13_9ARCH
hypothetical protein Tax=RBG_13_Deltaproteobacteria_43_22_curated
hypothetical protein
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_4_28
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31952..33940
DNA (1989bp) protein (663aa)
Acs; acyl-coenzyme A synthetases/AMP-(fatty) acid ligases; K01895 acetyl-CoA synthetase [EC:6.2.1.1] Tax=RBG_13_Deltaproteobacteria_43_22_curated
Acetyl-coenzyme A synthetase n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5D0C3_PELTS
Acs; acyl-coenzyme A synthetases/AMP-(fatty) acid ligases
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_4_29
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34079..35371
DNA (1293bp) protein (431aa)
Nitrate/nitrite transporter n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C4I9_DESTA
nitrate/nitrite transporter Tax=RBG_13_Deltaproteobacteria_43_22_curated
nitrate/nitrite transporter
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_4_30
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35478..36611)
DNA (1134bp) protein (378aa)
histone deacetylase/AcuC/AphA family protein Tax=RBG_13_Deltaproteobacteria_43_22_curated
Histone deacetylase superfamily protein id=3936003 bin=GWC2_Deltaproteobacteria_56_8 species=uncultured Acidobacteria bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWC2_Deltaproteobacteria_56_8 organism_group=Deltaproteobacteria
histone deacetylase/AcuC/AphA family protein
Displaying items 1-30 of 157 in total

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