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RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_87

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Displaying items 1-30 of 125 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_87_1
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..113)
DNA (111bp) protein (37aa)
Tax=RBG_13_Deltaproteobacteria_43_22_curated
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_87_2
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

783..3266
DNA (2484bp) protein (828aa)
pyruvate formate-lyase n=1 Tax=Clostridium arbusti RepID=UPI000287BF52
pyruvate formate-lyase Tax=RBG_13_Deltaproteobacteria_43_22_curated
pyruvate formate-lyase
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_87_3
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3535..4335
DNA (801bp) protein (267aa)
enoyl-CoA hydratase/carnithine racemase Tax=RBG_13_Deltaproteobacteria_43_22_curated
Enoyl-CoA hydratase/isomerase family protein id=4485930 bin=GWC2_Methylomirabilis_70_24 species=Carboxydothermus hydrogenoformans genus=Carboxydothermus taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
enoyl-CoA hydratase/carnithine racemase
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_87_4
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4593..5480)
DNA (888bp) protein (296aa)
Methylenetetrahydrofolate reductase n=1 Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FFJ4_DESAA
methylenetetrahydrofolate reductase Tax=RBG_13_Deltaproteobacteria_43_22_curated
methylenetetrahydrofolate reductase
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_87_5
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5512..6156)
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FFJ3_DESAA
hypothetical protein Tax=RBG_13_Deltaproteobacteria_43_22_curated
hypothetical protein
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_87_6
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6167..9292)
DNA (3126bp) protein (1042aa)
NADH:ubiquinone oxidoreductase, NADH-binding subunit (NuoF-like) n=1 Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FFJ2_DESAA
respiratory-chain NADH dehydrogenase domain 51 kDa subunit Tax=RBG_13_Deltaproteobacteria_43_22_curated
respiratory-chain NADH dehydrogenase domain 51 kDa subunit
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_87_7
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9292..9789)
DNA (498bp) protein (166aa)
NADH dehydrogenase (ubiquinone) 24 kDa subunit; K00334 NADH-quinone oxidoreductase subunit E [EC:1.6.5.3] Tax=RBG_13_Deltaproteobacteria_43_22_curated
NADH-quinone oxidoreductase, E subunit-like protein (NuoE) n=1 Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FFJ1_DESAA
NADH dehydrogenase (ubiquinone) 24 kDa subunit
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_87_8
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9872..12520)
DNA (2649bp) protein (883aa)
NADH-quinone oxidoreductase subunit 3-like protein (Nqo3/NuoG) n=1 Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FFJ0_DESAA
molybdopterin oxidoreductase Tax=RBG_13_Deltaproteobacteria_43_22_curated
molybdopterin oxidoreductase
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_87_9
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12644..13519)
DNA (876bp) protein (292aa)
Methylenetetrahydrofolate reductase n=1 Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FFI9_DESAA
methylenetetrahydrofolate reductase Tax=RBG_13_Deltaproteobacteria_43_22_curated
methylenetetrahydrofolate reductase
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_87_10
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13554..14135)
DNA (582bp) protein (194aa)
Protein with response regulator receiver domain n=1 Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FFI8_DESAA
response regulator receiver protein Tax=RBG_13_Deltaproteobacteria_43_22_curated
response regulator receiver protein
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_87_11
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14578..16749)
DNA (2172bp) protein (724aa)
PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FMG4_DESAA
PAS/PAC sensor signal transduction histidine kinase Tax=RBG_13_Deltaproteobacteria_43_22_curated
PAS/PAC sensor signal transduction histidine kinase
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_87_12
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16900..17829
DNA (930bp) protein (310aa)
glycyl-radical enzyme activating protein family (EC:1.97.1.4); K04069 pyruvate formate lyase activating enzyme [EC:1.97.1.4] Tax=RBG_13_Deltaproteobacteria_43_22_curated
glycyl-radical enzyme activating protein family (EC:1.97.1.4)
Pyruvate formate-lyase activating enzyme n=1 Tax=Eubacterium yurii subsp. margaretiae ATCC 43715 RepID=E0QH08_9FIRM id=1241814 bin=RBG2 species=[Eubacterium] yurii genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RBG2 organism_group=Chloroflexi
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_87_13
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17938..18732
DNA (795bp) protein (265aa)
Enoyl-CoA hydratase/isomerase n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GGZ4_9FIRM
enoyl-CoA hydratase/isomerase Tax=RBG_13_Deltaproteobacteria_43_22_curated
enoyl-CoA hydratase/isomerase
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_87_14
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18922..19839)
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Smithella sp. ME-1 RepID=V4FI70_9DELT
peptidase M10A and M12B matrixin and adamalysin Tax=RBG_13_Deltaproteobacteria_43_22_curated
hypothetical protein
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_87_15
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20131..20451
DNA (321bp) protein (107aa)
enoyl-CoA hydratase (EC:4.2.1.17) Tax=RBG_13_Deltaproteobacteria_43_22_curated
Enoyl-CoA hydratase n=1 Tax=Pseudomonas sp. CF150 RepID=S6IZA3_9PSED
enoyl-CoA hydratase
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_87_16
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20475..21281
DNA (807bp) protein (269aa)
Sir2 family transcriptional regulator; K12410 NAD-dependent deacetylase [EC:3.5.1.-] Tax=RBG_13_Deltaproteobacteria_43_22_curated
NAD-dependent deacetylase 2 n=1 Tax=uncultured Desulfobacterium sp. RepID=E1YLK3_9DELT id=1241326 bin=RBG2 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG2 organism_group=Chloroflexi
Sir2 family transcriptional regulator
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_87_17
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21435..22289
DNA (855bp) protein (285aa)
Rubrerythrin and thioesterase superfamily protein n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LQN2_SYNAS
rubrerythrin and thioesterase superfamily protein Tax=RBG_13_Deltaproteobacteria_43_22_curated
rubrerythrin and thioesterase superfamily protein
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_87_18
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22345..22677
DNA (333bp) protein (111aa)
Uncharacterized protein, gamma-carboxymuconolactone decarboxylase subunit like protein n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1NE74_DESSD
uncharacterized protein, gamma-carboxymuconolactone decarboxylase subunit like protein Tax=RBG_13_Deltaproteobacteria_43_22_curated
uncharacterized protein, gamma-carboxymuconolactone decarboxylase subunit like protein
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_87_19
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22759..23574
DNA (816bp) protein (272aa)
hypothetical protein n=1 Tax=Dasania marina RepID=UPI000377FDA5
alpha/beta hydrolase fold protein Tax=RBG_13_Deltaproteobacteria_43_22_curated
alpha/beta hydrolase fold protein
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_87_20
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23632..24123
DNA (492bp) protein (164aa)
sortase-like acyltransferase Tax=RBG_13_Deltaproteobacteria_43_22_curated
Sortase-like acyltransferase id=4225846 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
sortase-like acyltransferase
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_87_21
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24211..26850)
DNA (2640bp) protein (880aa)
Signal transduction histidine kinase n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LYG0_SYNAS
signal transduction histidine kinase Tax=RBG_13_Deltaproteobacteria_43_22_curated
signal transduction histidine kinase
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_87_22
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


27080..28336
DNA (1257bp) protein (419aa)
hisS; histidyl-tRNA synthetase (EC:6.1.1.21); K01892 histidyl-tRNA synthetase [EC:6.1.1.21] Tax=RBG_13_Deltaproteobacteria_43_22_curated
hisS; histidyl-tRNA synthetase (EC:6.1.1.21)
Histidine--tRNA ligase id=4604733 bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_87_23
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


28560..30341
DNA (1782bp) protein (594aa)
aspartyl-tRNA synthetase (EC:6.1.1.12); K01876 aspartyl-tRNA synthetase [EC:6.1.1.12] Tax=RBG_13_Deltaproteobacteria_43_22_curated
aspartyl-tRNA synthetase (EC:6.1.1.12)
Aspartate--tRNA ligase n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NG35_DESAR
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_87_24
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30451..32280
DNA (1830bp) protein (610aa)
Pyruvate carboxyltransferase n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LNH2_SYNFM
pyruvate carboxyltransferase Tax=RBG_13_Deltaproteobacteria_43_22_curated
pyruvate carboxyltransferase
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_87_25
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32387..32599
DNA (213bp) protein (71aa)
Biotin/lipoyl attachment domain-containing protein n=1 Tax=Desulfarculus baarsii (strain ATCC 33931 / DSM 2075 / VKM B-1802 / 2st14) RepID=E1QFB4_DESB2
biotin/lipoyl attachment domain-containing protein Tax=RBG_13_Deltaproteobacteria_43_22_curated
biotin/lipoyl attachment domain-containing protein
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_87_26
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32732..34285
DNA (1554bp) protein (518aa)
carboxyl transferase (EC:6.4.1.3); K01966 propionyl-CoA carboxylase beta chain [EC:6.4.1.3] Tax=RBG_13_Deltaproteobacteria_43_22_curated
carboxyl transferase (EC:6.4.1.3)
Carboxyl transferase domain protein n=1 Tax=delta proteobacterium NaphS2 RepID=D8FCG6_9DELT
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_87_27
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34395..36071
DNA (1677bp) protein (559aa)
methylmalonyl-CoA mutase large subunit; K01848 methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2] Tax=RBG_13_Deltaproteobacteria_43_22_curated
Methylmalonyl-CoA mutase, large subunit n=4 Tax=Thermoanaerobacter RepID=G2MXT0_9THEO
methylmalonyl-CoA mutase large subunit
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_87_28
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36178..36582
DNA (405bp) protein (135aa)
cobalamin B12-binding domain-containing protein; K01849 methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2] Tax=RBG_13_Deltaproteobacteria_43_22_curated
Cobalamin B12-binding domain protein n=1 Tax=Desulfarculus baarsii (strain ATCC 33931 / DSM 2075 / VKM B-1802 / 2st14) RepID=E1QFB7_DESB2
cobalamin B12-binding domain-containing protein
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_87_29
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36853..37674
DNA (822bp) protein (274aa)
Flagellin domain protein n=1 Tax=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) RepID=B3EBN8_GEOLS
flagellin domain-containing protein Tax=RBG_13_Deltaproteobacteria_43_22_curated
flagellin domain-containing protein
RBG_13_Deltaproteobacteria_43_22_RBG_13_scaffold_87_30
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38599..39087
DNA (489bp) protein (163aa)
Spore Coat Protein U domain family protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RT50_9GAMM
Spore Coat Protein U domain family protein Tax=RBG_13_Deltaproteobacteria_43_22_curated
Displaying items 1-30 of 125 in total

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