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RBG_13_Deltaproteobacteria_58_19_RBG_13_scaffold_3239

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Displaying 28 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_13_Deltaproteobacteria_58_19_RBG_13_scaffold_3239_1
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..304
DNA (303bp) protein (101aa)
fliP; flagellar biosynthesis protein FliP (EC:3.1.1.3); K02419 flagellar biosynthetic protein FliP Tax=RBG_13_Deltaproteobacteria_58_19_curated
fliP; flagellar biosynthesis protein FliP (EC:3.1.1.3)
Flagellar biosynthetic protein FliP n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9LZR3_GEODF
RBG_13_Deltaproteobacteria_58_19_RBG_13_scaffold_3239_2
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

329..598
DNA (270bp) protein (90aa)
Flagellar biosynthetic protein FliQ n=1 Tax=Desulfovibrio fructosivorans JJ RepID=E1JVA2_DESFR
flagellar biosynthetic protein FliQ; K02420 flagellar biosynthetic protein FliQ Tax=RBG_13_Deltaproteobacteria_58_19_curated
flagellar biosynthetic protein FliQ
RBG_13_Deltaproteobacteria_58_19_RBG_13_scaffold_3239_3
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

607..1386
DNA (780bp) protein (260aa)
flagellar biosynthesis protein FliR n=1 Tax=Thermodesulfatator atlanticus RepID=UPI0003B4C274
flagellar biosynthetic protein FliR; K02421 flagellar biosynthetic protein FliR Tax=RBG_13_Deltaproteobacteria_58_19_curated
flagellar biosynthetic protein FliR
RBG_13_Deltaproteobacteria_58_19_RBG_13_scaffold_3239_4
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1389..2465
DNA (1077bp) protein (359aa)
Flagellar biosynthesis pathway component n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LT07_SYNAS
flagellar biosynthesis pathway component; K02401 flagellar biosynthetic protein FlhB Tax=RBG_13_Deltaproteobacteria_58_19_curated
flagellar biosynthesis pathway component
RBG_13_Deltaproteobacteria_58_19_RBG_13_scaffold_3239_5
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2462..4567
DNA (2106bp) protein (702aa)
Flagellar biosynthesis protein FlhA n=1 Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FK31_DESAA
flagellar biosynthesis protein FlhA; K02400 flagellar biosynthesis protein FlhA Tax=RBG_13_Deltaproteobacteria_58_19_curated
flagellar biosynthesis protein FlhA
RBG_13_Deltaproteobacteria_58_19_RBG_13_scaffold_3239_6
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


4557..5726
DNA (1170bp) protein (390aa)
Putative Flagellar biosynthesis protein flhF n=1 Tax=Nitrospina gracilis 3/211 RepID=M1Z1X6_9BACT
flagellar biosynthetic protein FlhF; K02404 flagellar biosynthesis protein FlhF Tax=RBG_13_Deltaproteobacteria_58_19_curated
flagellar biosynthetic protein FlhF
RBG_13_Deltaproteobacteria_58_19_RBG_13_scaffold_3239_7
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5704..6591
DNA (888bp) protein (296aa)
Site-determining protein n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NEF8_DESAR
cobyrinic acid ac-diamide synthase; K04562 flagellar biosynthesis protein FlhG Tax=RBG_13_Deltaproteobacteria_58_19_curated
cobyrinic acid ac-diamide synthase
RBG_13_Deltaproteobacteria_58_19_RBG_13_scaffold_3239_8
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6612..7415
DNA (804bp) protein (268aa)
RNA polymerase sigma factor n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NEF7_DESAR
RNA polymerase sigma 28 subunit FliA/WhiG; K02405 RNA polymerase sigma factor for flagellar operon FliA Tax=RBG_13_Deltaproteobacteria_58_19_curated
RNA polymerase sigma 28 subunit FliA/WhiG
RBG_13_Deltaproteobacteria_58_19_RBG_13_scaffold_3239_9
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7408..7884
DNA (477bp) protein (159aa)
Tax=RBG_13_Deltaproteobacteria_58_19_curated
RBG_13_Deltaproteobacteria_58_19_RBG_13_scaffold_3239_10
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7899..8102
DNA (204bp) protein (68aa)
Tax=RBG_13_Deltaproteobacteria_58_19_curated
RBG_13_Deltaproteobacteria_58_19_RBG_13_scaffold_3239_11
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8116..8568
DNA (453bp) protein (151aa)
Tax=RBG_13_Deltaproteobacteria_58_19_curated
RBG_13_Deltaproteobacteria_58_19_RBG_13_scaffold_3239_12
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9077..10138
DNA (1062bp) protein (354aa)
gmd; GDP-mannose 4,6-dehydratase (EC:4.2.1.47); K01711 GDPmannose 4,6-dehydratase [EC:4.2.1.47] Tax=RBG_13_Deltaproteobacteria_58_19_curated
gmd; GDP-mannose 4,6-dehydratase (EC:4.2.1.47)
GDP-mannose 4,6-dehydratase n=1 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI000374EDE3
RBG_13_Deltaproteobacteria_58_19_RBG_13_scaffold_3239_13
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10158..11105
DNA (948bp) protein (316aa)
NAD-dependent epimerase/dehydratase; K02377 GDP-L-fucose synthase [EC:1.1.1.271] Tax=RBG_13_Deltaproteobacteria_58_19_curated
GDP-L-fucose synthase n=1 Tax=Thermus aquaticus Y51MC23 RepID=B7AAI5_THEAQ
NAD-dependent epimerase/dehydratase
RBG_13_Deltaproteobacteria_58_19_RBG_13_scaffold_3239_14
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11095..11985
DNA (891bp) protein (297aa)
ABC-type polysaccharide/polyol phosphate export systems, permease component n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LWP1_SYNAS
polysaccharide/polyol phosphate export systems, permease; K09690 lipopolysaccharide transport system permease protein Tax=RBG_13_Deltaproteobacteria_58_19_curated
polysaccharide/polyol phosphate export systems, permease
RBG_13_Deltaproteobacteria_58_19_RBG_13_scaffold_3239_15
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11996..13336
DNA (1341bp) protein (447aa)
ABC transporter n=1 Tax=SAR324 cluster bacterium SCGC AAA001-C10 RepID=UPI00028A28FC
ABC transporter ATP-binding protein; K09691 lipopolysaccharide transport system ATP-binding protein Tax=RBG_13_Deltaproteobacteria_58_19_curated
ABC transporter ATP-binding protein
RBG_13_Deltaproteobacteria_58_19_RBG_13_scaffold_3239_16
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13457..14515
DNA (1059bp) protein (353aa)
nans; N-acetylneuraminic acid synthase (EC:2.5.1.56 2.5.1.57); K05304 sialic acid synthase [EC:2.5.1.56 2.5.1.57] Tax=RBG_13_Deltaproteobacteria_58_19_curated
nans; N-acetylneuraminic acid synthase (EC:2.5.1.56 2.5.1.57)
Sialic acid synthase n=1 Tax=Gloeocapsa sp. PCC 73106 RepID=L8LPI8_9CHRO
RBG_13_Deltaproteobacteria_58_19_RBG_13_scaffold_3239_17
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14547..15365
DNA (819bp) protein (273aa)
short-chain dehydrogenase n=1 Tax=Desulfovibrio longus RepID=UPI0003B2F8A2
short-chain dehydrogenase/reductase SDR Tax=RBG_13_Deltaproteobacteria_58_19_curated
short-chain dehydrogenase/reductase SDR
RBG_13_Deltaproteobacteria_58_19_RBG_13_scaffold_3239_18
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15370..16842
DNA (1473bp) protein (491aa)
aldehyde dehydrogenase (EC:1.2.1.3); K00128 aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] Tax=RBG_13_Deltaproteobacteria_58_19_curated
aldehyde dehydrogenase (EC:1.2.1.3)
NAD-dependent aldehyde dehydrogenase n=1 Tax=Moorea producens 3L RepID=F4XYN6_9CYAN
RBG_13_Deltaproteobacteria_58_19_RBG_13_scaffold_3239_19
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16846..17604
DNA (759bp) protein (253aa)
neuA; acylneuraminate cytidylyltransferase (EC:2.7.7.43); K00983 N-acylneuraminate cytidylyltransferase [EC:2.7.7.43] Tax=RBG_13_Deltaproteobacteria_58_19_curated
neuA; acylneuraminate cytidylyltransferase (EC:2.7.7.43)
Acylneuraminate cytidylyltransferase, putative n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IXT7_RHOCS
RBG_13_Deltaproteobacteria_58_19_RBG_13_scaffold_3239_20
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17726..19177)
DNA (1452bp) protein (484aa)
radical SAM domain-containing protein Tax=RBG_13_Deltaproteobacteria_58_19_curated
dal:Dalk_5121 radical SAM domain protein id=127893 bin=ACD79 species=ACD79 genus=ACD79 taxon_order=ACD79 taxon_class=ACD79 phylum=Clamydiae tax=ACD79 organism_group=Chlamydiae organism_desc=Novel, branching deeply from Chlamydiae
radical SAM domain-containing protein
RBG_13_Deltaproteobacteria_58_19_RBG_13_scaffold_3239_21
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19220..20743)
DNA (1524bp) protein (508aa)
glgA; glycogen/starch synthase, ADP-glucose type; K00703 starch synthase [EC:2.4.1.21] Tax=RBG_13_Deltaproteobacteria_58_19_curated
glycogen synthase n=1 Tax=Bacillus acidiproducens RepID=UPI0003704F4E
glgA; glycogen/starch synthase
RBG_13_Deltaproteobacteria_58_19_RBG_13_scaffold_3239_22
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20776..21909)
DNA (1134bp) protein (378aa)
arnB2; UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase ArnB2 Tax=RBG_13_Deltaproteobacteria_58_19_curated
ArnB2: UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase id=3930368 bin=GWF2_Nitrospirae_44_13 species=ACD51 genus=ACD51 taxon_order=ACD51 taxon_class=ACD51 phylum=PER tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
arnB2; UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase ArnB2
RBG_13_Deltaproteobacteria_58_19_RBG_13_scaffold_3239_23
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21906..22892)
DNA (987bp) protein (329aa)
Hypothetical conserved protein n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SDC6_9BACT
hypothetical protein; K07027 Tax=RBG_13_Deltaproteobacteria_58_19_curated
hypothetical protein
RBG_13_Deltaproteobacteria_58_19_RBG_13_scaffold_3239_24
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22994..23626)
DNA (633bp) protein (211aa)
hypothetical protein n=1 Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B52338
type 11 methyltransferase Tax=RBG_13_Deltaproteobacteria_58_19_curated
type 11 methyltransferase
RBG_13_Deltaproteobacteria_58_19_RBG_13_scaffold_3239_25
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24219..26126
DNA (1908bp) protein (636aa)
asparagine synthase; K01953 asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] Tax=RBG_13_Deltaproteobacteria_58_19_curated
Asparagine synthetase n=1 Tax=Thermosipho melanesiensis (strain BI429 / DSM 12029) RepID=A6LKC4_THEM4
asparagine synthase
RBG_13_Deltaproteobacteria_58_19_RBG_13_scaffold_3239_26
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26126..26929
DNA (804bp) protein (268aa)
bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; K10011 UDP-4-amino-4-deoxy-L-arabinose formyltransferase / UDP-glucuronic acid dehydrogenase (UDP-4-ke
UDP-4-amino-4-deoxy-L-arabinose N-formyltransferase (EC 2.1.2.-) id=4864562 bin=GWC2_Methylomirabilis_70_16 species=Burkholderia rhizoxinica genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase
RBG_13_Deltaproteobacteria_58_19_RBG_13_scaffold_3239_27
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26944..27930
DNA (987bp) protein (329aa)
Radical SAM additional 4Fe4S-binding domain protein n=1 Tax=Sulfurospirillum barnesii (strain ATCC 700032 / DSM 10660 / SES-3) RepID=I3Y0K4_SULBS
radical SAM additional 4Fe4S-binding domain-containing protein Tax=RBG_13_Deltaproteobacteria_58_19_curated
radical SAM additional 4Fe4S-binding domain-containing protein
RBG_13_Deltaproteobacteria_58_19_RBG_13_scaffold_3239_28
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28293..28778
DNA (486bp) protein (162aa)
Radical SAM domain protein n=1 Tax=Thermosipho melanesiensis (strain BI429 / DSM 12029) RepID=A6LKC3_THEM4
radical SAM domain-containing protein Tax=RBG_13_Deltaproteobacteria_58_19_curated
radical SAM domain-containing protein
Displaying 28 items

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