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RBG_13_Deltaproteobacteria_58_19_RBG_13_scaffold_6016

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Displaying items 1-30 of 31 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_13_Deltaproteobacteria_58_19_RBG_13_scaffold_6016_1
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..595)
DNA (594bp) protein (198aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5BW25_BEUC1
short-chain dehydrogenase/reductase SDR Tax=RBG_13_Deltaproteobacteria_58_19_curated
short-chain dehydrogenase/reductase SDR
RBG_13_Deltaproteobacteria_58_19_RBG_13_scaffold_6016_2
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(608..1309)
DNA (702bp) protein (234aa)
Ubiquinone/menaquinone biosynthesis methyltransferase n=1 Tax=Actinomyces sp. oral taxon 171 str. F0337 RepID=E7N5R3_9ACTO
methyltransferase type 11 Tax=RBG_13_Deltaproteobacteria_58_19_curated
hypothetical protein
RBG_13_Deltaproteobacteria_58_19_RBG_13_scaffold_6016_3
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1311..2741)
DNA (1431bp) protein (477aa)
undecaprenyl-phosphate galactose phosphotransferase (EC:2.7.8.6) Tax=RBG_13_Deltaproteobacteria_58_19_curated
undecaprenyl-phosphate galactose phosphotransferase (EC:2.7.8.6)
UDP-phosphate galactose phosphotransferase n=1 Tax=Marinimicrobia bacterium JGI 0000039-D08 RepID=UPI0003B65A98
RBG_13_Deltaproteobacteria_58_19_RBG_13_scaffold_6016_4
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2954..3811)
DNA (858bp) protein (286aa)
dTDP 4-dehydrorhamnose reductase; K00067 dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] Tax=RBG_13_Deltaproteobacteria_58_19_curated
Spore coat polysaccharide biosynthesis protein spsK n=1 Tax=uncultured bacterium RepID=K1XTQ8_9BACT
dTDP 4-dehydrorhamnose reductase
RBG_13_Deltaproteobacteria_58_19_RBG_13_scaffold_6016_5
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3811..4788)
DNA (978bp) protein (326aa)
NAD-dependent epimerase/dehydratase (EC:3.13.1.1) Tax=RBG_13_Deltaproteobacteria_58_19_curated
Nucleoside-diphosphate-sugar epimerase n=1 Tax=Methanobacterium sp. Maddingley MBC34 RepID=K6U0S0_9EURY
DegT/DnrJ/EryC1/StrS aminotransferase
RBG_13_Deltaproteobacteria_58_19_RBG_13_scaffold_6016_6
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4869..5336)
DNA (468bp) protein (156aa)
rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase and related enzyme (EC:5.1.3.13); K01790 dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] Tax=RBG_13_Deltaproteobacteria_58_19_curated
dTDP-4-dehydrorhamnose 3,5-epimerase; K01790 dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] id=16793553 bin=RBG_16_Aminicenantes_63_16_plus species=Methanofollis liminatans genus=Methanofollis taxon_order=Methanomicrobiales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=RBG_16_Aminicenantes_63_16_plus organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate Resolve three similar GC_Cov Aminicentantes bins with ESOM
rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase and related enzyme (EC:5.1.3.13)
RBG_13_Deltaproteobacteria_58_19_RBG_13_scaffold_6016_7
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5333..6220)
DNA (888bp) protein (296aa)
Predicted glycosyltransferases Tax=RBG_13_Deltaproteobacteria_58_19_curated
Glycosyl transferase family 2 id=3102551 bin=GWC2_Methylomirabilis_70_16 species=Nitrolancetus hollandicus genus=Nitrolancetus taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Predicted glycosyltransferases
RBG_13_Deltaproteobacteria_58_19_RBG_13_scaffold_6016_8
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6333..6860)
DNA (528bp) protein (176aa)
Methyltransferase n=1 Tax=Methylophaga nitratireducenticrescens (strain ATCC BAA-2433 / DSM 25689 / JAM1) RepID=I1XIP8_METNJ
methyltransferase Tax=RBG_13_Deltaproteobacteria_58_19_curated
methyltransferase
RBG_13_Deltaproteobacteria_58_19_RBG_13_scaffold_6016_9
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8048..9682)
DNA (1635bp) protein (545aa)
Tax=RBG_13_Deltaproteobacteria_58_19_curated
RBG_13_Deltaproteobacteria_58_19_RBG_13_scaffold_6016_10
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9762..10523)
DNA (762bp) protein (254aa)
Glycosyl transferase, family 2 (Fragment) Tax=RBG_13_Deltaproteobacteria_58_19_curated
Glycosyl transferase, family 2 (Fragment) id=4710266 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Crocosphaera watsonii genus=Crocosphaera taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
RBG_13_Deltaproteobacteria_58_19_RBG_13_scaffold_6016_11
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11374..11607
DNA (234bp) protein (78aa)
Tax=RBG_13_Deltaproteobacteria_58_19_curated
RBG_13_Deltaproteobacteria_58_19_RBG_13_scaffold_6016_12
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12173..13759)
DNA (1587bp) protein (529aa)
radical SAM protein Tax=RBG_13_Deltaproteobacteria_58_19_curated
Radical SAM domain protein id=3923652 bin=GWC2_Planctomycetes_45_44 species=Syntrophobotulus glycolicus genus=Syntrophobotulus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Planctomycetes_45_44 organism_group=Planctomycetes organism_desc=Novel; good
radical SAM protein
RBG_13_Deltaproteobacteria_58_19_RBG_13_scaffold_6016_13
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13879..14484)
DNA (606bp) protein (202aa)
Putative uncharacterized protein n=1 Tax=Oscillatoria sp. PCC 6506 RepID=D8FXN1_9CYAN
dTDP-4-dehydrorhamnose reductase Tax=RBG_13_Deltaproteobacteria_58_19_curated
dTDP-4-dehydrorhamnose reductase
RBG_13_Deltaproteobacteria_58_19_RBG_13_scaffold_6016_14
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15133..15300
DNA (168bp) protein (56aa)
Tax=RBG_13_Deltaproteobacteria_58_19_curated
RBG_13_Deltaproteobacteria_58_19_RBG_13_scaffold_6016_15
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15443..16102)
DNA (660bp) protein (220aa)
type 11 methyltransferase Tax=RBG_13_Deltaproteobacteria_58_19_curated
Methyltransferase type 11 id=2833974 bin=GWA1_Alphaproteobacteria_45_9 species=Rhodopseudomonas palustris genus=Rhodopseudomonas taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA1_Alphaproteobacteria_45_9 organism_group=Alphaproteobacteria organism_desc=Good marker genes; small
type 11 methyltransferase
RBG_13_Deltaproteobacteria_58_19_RBG_13_scaffold_6016_16
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16171..17157)
DNA (987bp) protein (329aa)
NAD-dependent epimerase/dehydratase; K01710 dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] Tax=RBG_13_Deltaproteobacteria_58_19_curated
NAD-dependent epimerase/dehydratase id=3429954 bin=GWC2_Methylomirabilis_70_16 species=Chlorobium ferrooxidans genus=Chlorobium taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
NAD-dependent epimerase/dehydratase
RBG_13_Deltaproteobacteria_58_19_RBG_13_scaffold_6016_17
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17173..18303)
DNA (1131bp) protein (377aa)
Nucleotide-sugar aminotransferase n=3 Tax=Coxiella burnetii RepID=B6J901_COXB1
nucleotide-sugar aminotransferase Tax=RBG_13_Deltaproteobacteria_58_19_curated
nucleotide-sugar aminotransferase
RBG_13_Deltaproteobacteria_58_19_RBG_13_scaffold_6016_18
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20085..20666)
DNA (582bp) protein (194aa)
acetoin dehydrogenase (TPP-dependent) subunit alpha; K00161 pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] Tax=RBG_13_Deltaproteobacteria_58_19_curated
Dehydrogenase E1 component id=4408263 bin=GWA2_Elusimicrobia_51_34 species=Rhodopseudomonas palustris genus=Rhodopseudomonas taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_51_34 organism_group=Elusimicrobia
acetoin dehydrogenase (TPP-dependent) subunit alpha
RBG_13_Deltaproteobacteria_58_19_RBG_13_scaffold_6016_19
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20976..21974)
DNA (999bp) protein (333aa)
UDP-glucose 4-epimerase n=1 Tax=Crocosphaera watsonii WH 8502 RepID=T2ICQ6_CROWT
NAD-dependent epimerase/dehydratase Tax=RBG_13_Deltaproteobacteria_58_19_curated
NAD-dependent epimerase/dehydratase
RBG_13_Deltaproteobacteria_58_19_RBG_13_scaffold_6016_20
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21980..22420)
DNA (441bp) protein (147aa)
sugar isomerase (SIS); K03271 D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] Tax=RBG_13_Deltaproteobacteria_58_19_curated
Sugar isomerase (SIS) n=1 Tax=Desulfovibrio aespoeensis (strain ATCC 700646 / DSM 10631 / Aspo-2) RepID=E6VR04_DESAO
sugar isomerase (SIS)
RBG_13_Deltaproteobacteria_58_19_RBG_13_scaffold_6016_21
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22417..23400)
DNA (984bp) protein (328aa)
hypothetical protein Tax=RBG_13_Deltaproteobacteria_58_19_curated
Putative uncharacterized protein id=4098299 bin=GWF2_Lentisphaerae_57_35 species=Desulfovibrio aespoeensis genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
hypothetical protein
RBG_13_Deltaproteobacteria_58_19_RBG_13_scaffold_6016_22
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23423..24949)
DNA (1527bp) protein (509aa)
Cytidyltransferase-related domain protein n=1 Tax=Desulfovibrio aespoeensis (strain ATCC 700646 / DSM 10631 / Aspo-2) RepID=E6VR06_DESAO
cytidyltransferase-like domain-containing protein Tax=RBG_13_Deltaproteobacteria_58_19_curated
cytidyltransferase-like domain-containing protein
RBG_13_Deltaproteobacteria_58_19_RBG_13_scaffold_6016_23
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25005..25712)
DNA (708bp) protein (236aa)
Lipopolysaccharide biosynthesis protein n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NIJ4_DESAR
lipopolysaccharide biosynthesis protein Tax=RBG_13_Deltaproteobacteria_58_19_curated
lipopolysaccharide biosynthesis protein
RBG_13_Deltaproteobacteria_58_19_RBG_13_scaffold_6016_24
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26160..26660)
DNA (501bp) protein (167aa)
Lytic transglycosylase catalytic n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NDR6_DESAR
Lytic transglycosylase catalytic Tax=RBG_13_Deltaproteobacteria_58_19_curated
Lytic transglycosylase catalytic
RBG_13_Deltaproteobacteria_58_19_RBG_13_scaffold_6016_25
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26839..27036)
DNA (198bp) protein (66aa)
Tax=RBG_13_Deltaproteobacteria_58_19_curated
RBG_13_Deltaproteobacteria_58_19_RBG_13_scaffold_6016_26
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27403..27837)
DNA (435bp) protein (145aa)
Polysaccharide export protein n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NJT2_DESAR
polysaccharide export protein Tax=RBG_13_Deltaproteobacteria_58_19_curated
polysaccharide export protein
RBG_13_Deltaproteobacteria_58_19_RBG_13_scaffold_6016_27
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27834..29867)
DNA (2034bp) protein (678aa)
polysaccharide export protein Tax=RBG_13_Deltaproteobacteria_58_19_curated
polysaccharide export protein
Polysaccharide export protein id=2009173 bin=GWB2_Proteobacteria_55_19 species=unknown genus=Thermodesulfobacterium taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
RBG_13_Deltaproteobacteria_58_19_RBG_13_scaffold_6016_28
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30260..30871)
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NJT3_DESAR
hypothetical protein Tax=RBG_13_Deltaproteobacteria_58_19_curated
hypothetical protein
RBG_13_Deltaproteobacteria_58_19_RBG_13_scaffold_6016_29
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31678..32235)
DNA (558bp) protein (186aa)
Transcription termination/antitermination protein nusG n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NHY7_DESAR
NusG antitermination factor Tax=RBG_13_Deltaproteobacteria_58_19_curated
NusG antitermination factor
RBG_13_Deltaproteobacteria_58_19_RBG_13_scaffold_6016_30
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32886..33059)
DNA (174bp) protein (58aa)
Tax=RBG_13_Deltaproteobacteria_58_19_curated
Displaying items 1-30 of 31 in total

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