ggKbase home page

RBG_13_Deltaproteobacteria_58_19_RBG_13_scaffold_1345_9

Organism: Deltaproteobacteria bacterium RBG_13_58_19

partial RP 39 / 55 MC: 1 BSCG 39 / 51 ASCG 9 / 38
Location: comp(8013..8603)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase subunit sigma-24 n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B72D57 similarity UNIREF
DB: UNIREF100
  • Identity: 39.8
  • Coverage: 181.0
  • Bit_score: 128
  • Evalue 1.00e-26
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=RBG_13_Deltaproteobacteria_58_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 196.0
  • Bit_score: 391
  • Evalue 7.00e-106
RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 36.3
  • Coverage: 179.0
  • Bit_score: 123
  • Evalue 5.50e-26

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_13_Deltaproteobacteria_58_19_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 591
ATGACTGACCCTTACCTCGTGGCTCGGGCGCAGCAAGGCGACCTCCCGGCCTTCGAGGAACTGGTAAAGAAGTATCAACGGGAGATTTACGGCCTGGCCTGCCGCATGGTCAGTGATGGGGAGGAAGCCAAGGATCTCACGCAACAGGCCTTTCTCCAGGCCTTTGTCCATATTCGGGAGTTCCGCCAGCAATCCCAGTTCCGCACCTGGCTTTTCCGCATCGCCATTAATCAGTGTTATAATTTTTTAAAGAGTAAGAAAAAATATGGGGAACCGCTAGATTGCCAGGAAGTAGACGTGGTGGGGGAAGGTTCACCGGAAGAGGACTTGCTGGGCGAAGAGAAACATCGGCTTCTCTATGCGGCTCTGGCCCGGCTTCCCAGCAAACAACGGGCGGTGATTTCCCTCAAGTTGGAGCAGGGCCTTTCTTATCAAGAAATCAGTCAGATCCTGGGAGGAACGGCAGGGGCCGCCCGGGTTAATTATTGCCAGGCCCTGAAAACCTTAAAGAAATATTTAAGAAGCGAGGAAGAACATGAAGTGGCGGTGCGTCCTTATCCAGCGGTGGCTGCCAGATTTTCTCGACGGTGA
PROTEIN sequence
Length: 197
MTDPYLVARAQQGDLPAFEELVKKYQREIYGLACRMVSDGEEAKDLTQQAFLQAFVHIREFRQQSQFRTWLFRIAINQCYNFLKSKKKYGEPLDCQEVDVVGEGSPEEDLLGEEKHRLLYAALARLPSKQRAVISLKLEQGLSYQEISQILGGTAGAARVNYCQALKTLKKYLRSEEEHEVAVRPYPAVAARFSRR*