ggKbase home page

RBG_13_Deltaproteobacteria_58_19_RBG_13_scaffold_1345

Search features with annotation key words

Displaying items 1-30 of 40 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_13_Deltaproteobacteria_58_19_RBG_13_scaffold_1345_1
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..278)
DNA (276bp) protein (92aa)
hypothetical protein Tax=RBG_13_Deltaproteobacteria_58_19_curated
hypothetical protein id=14623645 bin=bin5_DeltaP species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
hypothetical protein
RBG_13_Deltaproteobacteria_58_19_RBG_13_scaffold_1345_2
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(293..550)
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NF43_DESAR
hypothetical protein Tax=RBG_13_Deltaproteobacteria_58_19_curated
hypothetical protein
RBG_13_Deltaproteobacteria_58_19_RBG_13_scaffold_1345_3
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(566..1051)
DNA (486bp) protein (162aa)
hypothetical protein Tax=RBG_13_Deltaproteobacteria_58_19_curated
hypothetical protein id=14623643 bin=bin5_DeltaP species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
hypothetical protein
RBG_13_Deltaproteobacteria_58_19_RBG_13_scaffold_1345_4
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1070..2497)
DNA (1428bp) protein (476aa)
L-carnitine dehydratase/bile acid-inducible protein F n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NF45_DESAR
L-carnitine dehydratase/bile acid-inducible protein F Tax=RBG_13_Deltaproteobacteria_58_19_curated
L-carnitine dehydratase/bile acid-inducible protein F
RBG_13_Deltaproteobacteria_58_19_RBG_13_scaffold_1345_5
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2497..3993)
DNA (1497bp) protein (499aa)
L-carnitine dehydratase/bile acid-inducible protein F n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NF46_DESAR
L-carnitine dehydratase/bile acid-inducible protein F Tax=RBG_13_Deltaproteobacteria_58_19_curated
L-carnitine dehydratase/bile acid-inducible protein F
RBG_13_Deltaproteobacteria_58_19_RBG_13_scaffold_1345_6
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4548..6464)
DNA (1917bp) protein (639aa)
Fis family transcriptional regulator Tax=RBG_13_Deltaproteobacteria_58_19_curated
Sigma54 specific transcriptional regulator with PAS/PAC sensor, Fis family id=3256618 bin=GWC2_Proteo_65_14_Ab886 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
Fis family transcriptional regulator
RBG_13_Deltaproteobacteria_58_19_RBG_13_scaffold_1345_7
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7012..7536)
DNA (525bp) protein (175aa)
Tax=RBG_13_Deltaproteobacteria_58_19_curated
RBG_13_Deltaproteobacteria_58_19_RBG_13_scaffold_1345_8
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7550..8068)
DNA (519bp) protein (173aa)
hypothetical protein Tax=RBG_13_Deltaproteobacteria_58_19_curated
hypothetical protein id=14429394 bin=bin3_NC10 species=Myxococcus sp. (contaminant ex DSM 436) genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
hypothetical protein
RBG_13_Deltaproteobacteria_58_19_RBG_13_scaffold_1345_9
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8013..8603)
DNA (591bp) protein (197aa)
RNA polymerase subunit sigma-24 n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B72D57
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=RBG_13_Deltaproteobacteria_58_19_curated
RNA polymerase sigma factor
RBG_13_Deltaproteobacteria_58_19_RBG_13_scaffold_1345_10
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8720..9319)
DNA (600bp) protein (200aa)
UPI0003D5B3E1 related cluster n=1 Tax=unknown RepID=UPI0003D5B3E1
hypothetical protein Tax=RBG_13_Deltaproteobacteria_58_19_curated
hypothetical protein
RBG_13_Deltaproteobacteria_58_19_RBG_13_scaffold_1345_11
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9379..10587)
DNA (1209bp) protein (403aa)
Arabinose efflux permease family protein n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C063_DESTA
arabinose efflux permease family protein Tax=RBG_13_Deltaproteobacteria_58_19_curated
arabinose efflux permease family protein
RBG_13_Deltaproteobacteria_58_19_RBG_13_scaffold_1345_12
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10845..11738
DNA (894bp) protein (298aa)
Uncharacterized protein n=1 Tax=Eggerthella sp. CAG:1427 RepID=R5G1T2_9ACTN
Uncharacterized protein Tax=RBG_13_Deltaproteobacteria_58_19_curated
RBG_13_Deltaproteobacteria_58_19_RBG_13_scaffold_1345_13
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11985..12938)
DNA (954bp) protein (318aa)
SurA domain-containing protein; K03771 peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8] Tax=RBG_13_Deltaproteobacteria_58_19_curated
SurA domain protein n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NC43_DESAR
SurA domain-containing protein
RBG_13_Deltaproteobacteria_58_19_RBG_13_scaffold_1345_14
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12935..16402)
DNA (3468bp) protein (1156aa)
transcription-repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-] Tax=RBG_13_Deltaproteobacteria_58_19_curated
Transcription-repair-coupling factor n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NC42_DESAR
transcription-repair coupling factor
RBG_13_Deltaproteobacteria_58_19_RBG_13_scaffold_1345_15
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16722..17462
DNA (741bp) protein (247aa)
Flagellar basal-body rod protein FlgF n=1 Tax=Caulobacter crescentus OR37 RepID=R0E9X3_CAUCE
flagellar basal-body rod protein FlgF; K02391 flagellar basal-body rod protein FlgF Tax=RBG_13_Deltaproteobacteria_58_19_curated
flagellar basal-body rod protein FlgF
RBG_13_Deltaproteobacteria_58_19_RBG_13_scaffold_1345_16
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17481..18263
DNA (783bp) protein (261aa)
Flagellar basal-body rod protein FlgG n=1 Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FK21_DESAA
flgG; flagellar basal body rod protein FlgG; K02392 flagellar basal-body rod protein FlgG Tax=RBG_13_Deltaproteobacteria_58_19_curated
flgG; flagellar basal body rod protein FlgG
RBG_13_Deltaproteobacteria_58_19_RBG_13_scaffold_1345_17
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18279..19253
DNA (975bp) protein (325aa)
hypothetical protein n=1 Tax=candidate division NC10 bacterium UW 659-1-D11 RepID=UPI00036B0E18
hypothetical protein Tax=RBG_13_Deltaproteobacteria_58_19_curated
hypothetical protein
RBG_13_Deltaproteobacteria_58_19_RBG_13_scaffold_1345_18
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19250..19966
DNA (717bp) protein (239aa)
Flagellar L-ring protein n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RHP8_DESPD
flagellar L-ring protein; K02393 flagellar L-ring protein precursor FlgH Tax=RBG_13_Deltaproteobacteria_58_19_curated
flagellar L-ring protein
RBG_13_Deltaproteobacteria_58_19_RBG_13_scaffold_1345_19
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19983..21140
DNA (1158bp) protein (386aa)
Flagellar P-ring protein n=1 Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FK18_DESAA
flagellar P-ring protein; K02394 flagellar P-ring protein precursor FlgI Tax=RBG_13_Deltaproteobacteria_58_19_curated
flagellar P-ring protein
RBG_13_Deltaproteobacteria_58_19_RBG_13_scaffold_1345_20
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21500..21919
DNA (420bp) protein (140aa)
Tax=RBG_13_Deltaproteobacteria_58_19_curated
RBG_13_Deltaproteobacteria_58_19_RBG_13_scaffold_1345_21
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22111..23835
DNA (1725bp) protein (575aa)
Putative uncharacterized protein n=1 Tax=uncultured Desulfobacterium sp. RepID=E1YHN3_9DELT
flagellar hook-associated protein FlgK; K02396 flagellar hook-associated protein 1 FlgK Tax=RBG_13_Deltaproteobacteria_58_19_curated
flagellar hook-associated protein FlgK
RBG_13_Deltaproteobacteria_58_19_RBG_13_scaffold_1345_22
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23848..25020
DNA (1173bp) protein (391aa)
Flagellin and related hook-associated proteins n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LT24_SYNAS
flagellin and related hook-associated proteins; K02397 flagellar hook-associated protein 3 FlgL Tax=RBG_13_Deltaproteobacteria_58_19_curated
flagellin and related hook-associated proteins
RBG_13_Deltaproteobacteria_58_19_RBG_13_scaffold_1345_23
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25054..25284
DNA (231bp) protein (77aa)
carbon storage regulator n=1 Tax=Desulfovibrio longus RepID=UPI0003B338BF
carbon storage regulator CsrA; K03563 carbon storage regulator Tax=RBG_13_Deltaproteobacteria_58_19_curated
carbon storage regulator CsrA
RBG_13_Deltaproteobacteria_58_19_RBG_13_scaffold_1345_24
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25289..25756
DNA (468bp) protein (156aa)
Flagellar assembly factor FliW n=1 Tax=Thermodesulfatator indicus (strain DSM 15286 / JCM 11887 / CIR29812) RepID=F8AAQ9_THEID
hypothetical protein; K13626 flagellar assembly factor FliW Tax=RBG_13_Deltaproteobacteria_58_19_curated
hypothetical protein
RBG_13_Deltaproteobacteria_58_19_RBG_13_scaffold_1345_25
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25859..26668)
DNA (810bp) protein (270aa)
4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LK77_SYNFM
4Fe-4S ferredoxin Tax=RBG_13_Deltaproteobacteria_58_19_curated
4Fe-4S ferredoxin
RBG_13_Deltaproteobacteria_58_19_RBG_13_scaffold_1345_26
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26729..27157)
DNA (429bp) protein (143aa)
methyl-viologen-reducing hydrogenase subunit delta; K14127 F420-non-reducing hydrogenase iron-sulfur subunit D [EC:1.12.99.-] Tax=RBG_13_Deltaproteobacteria_58_19_curated
F420-non-reducing hydrogenase subunit D n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LK78_SYNFM
methyl-viologen-reducing hydrogenase subunit delta
RBG_13_Deltaproteobacteria_58_19_RBG_13_scaffold_1345_27
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27190..30009)
DNA (2820bp) protein (940aa)
4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LK79_SYNFM
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Tax=RBG_13_Deltaproteobacteria_58_19_curated
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
RBG_13_Deltaproteobacteria_58_19_RBG_13_scaffold_1345_28
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30079..30273)
DNA (195bp) protein (65aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase Tax=RBG_13_Deltaproteobacteria_58_19_curated
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein id=3668309 bin=GWC2_Syntrophus__56_31 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
RBG_13_Deltaproteobacteria_58_19_RBG_13_scaffold_1345_29
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30767..31090
DNA (324bp) protein (108aa)
Succinylglutamate desuccinylase/aspartoacylase n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NH97_DESAR
succinylglutamate desuccinylase/aspartoacylase Tax=RBG_13_Deltaproteobacteria_58_19_curated
succinylglutamate desuccinylase/aspartoacylase
RBG_13_Deltaproteobacteria_58_19_RBG_13_scaffold_1345_30
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31302..32027
DNA (726bp) protein (242aa)
ABC transporter related protein n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NH98_DESAR
ABC transporter; K09013 Fe-S cluster assembly ATP-binding protein Tax=RBG_13_Deltaproteobacteria_58_19_curated
ABC transporter
Displaying items 1-30 of 40 in total

View Taxonomy