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RBG_13_DPX1_53_10_RBG_13_scaffold_12610

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_13_DPX1_53_10_RBG_13_scaffold_12610_1
RBG_13_Deltaproteobacteria_53_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..179
DNA (177bp) protein (59aa)
Tax=RBG_13_Deltaproteobacteria_53_10_curated
RBG_13_DPX1_53_10_RBG_13_scaffold_12610_2
RBG_13_Deltaproteobacteria_53_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

256..567
DNA (312bp) protein (104aa)
Tax=RBG_13_Deltaproteobacteria_53_10_curated
RBG_13_DPX1_53_10_RBG_13_scaffold_12610_3
RBG_13_Deltaproteobacteria_53_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(579..767)
DNA (189bp) protein (63aa)
Tax=RBG_13_Deltaproteobacteria_53_10_curated
RBG_13_DPX1_53_10_RBG_13_scaffold_12610_4
RBG_13_Deltaproteobacteria_53_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1119..1697)
DNA (579bp) protein (193aa)
Tax=RBG_13_Deltaproteobacteria_53_10_curated
RBG_13_DPX1_53_10_RBG_13_scaffold_12610_5
RBG_13_Deltaproteobacteria_53_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1788..2354)
DNA (567bp) protein (189aa)
Putative uncharacterized protein n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G5C6_GEOUR
hypothetical protein Tax=RBG_13_Deltaproteobacteria_53_10_curated
hypothetical protein
RBG_13_DPX1_53_10_RBG_13_scaffold_12610_6
RBG_13_Deltaproteobacteria_53_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2716..4326)
DNA (1611bp) protein (537aa)
hypothetical protein Tax=RBG_13_Deltaproteobacteria_53_10_curated
RBG_13_DPX1_53_10_RBG_13_scaffold_12610_7
RBG_13_Deltaproteobacteria_53_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4334..5098)
DNA (765bp) protein (255aa)
formylmethanofuran dehydrogenase subunit FwdC; K00202 formylmethanofuran dehydrogenase subunit C [EC:1.2.99.5] Tax=RBG_13_Deltaproteobacteria_53_10_curated
formylmethanofuran dehydrogenase (EC:1.2.99.5)
Tungsten-containing formylmethanofuran dehydrogenase 2 subunit C n=1 Tax=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) RepID=FWDC_METJA
RBG_13_DPX1_53_10_RBG_13_scaffold_12610_8
RBG_13_Deltaproteobacteria_53_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5111..6445)
DNA (1335bp) protein (445aa)
ATPase associated with various cellular activities AAA_5 n=1 Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KRC3_ARCVS id=5102882 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
ATPase Tax=RBG_13_Deltaproteobacteria_53_10_curated
ATPase associated with various cellular activity AAA_5
RBG_13_DPX1_53_10_RBG_13_scaffold_12610_9
RBG_13_Deltaproteobacteria_53_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6546..7955)
DNA (1410bp) protein (470aa)
hypothetical protein Tax=RBG_13_Deltaproteobacteria_53_10_curated
Putative uncharacterized protein id=1870065 bin=GWD2_Nitrospirae-related_57_8 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
hypothetical protein
RBG_13_DPX1_53_10_RBG_13_scaffold_12610_10
RBG_13_Deltaproteobacteria_53_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8589..9527
DNA (939bp) protein (313aa)
Tax=RBG_13_Deltaproteobacteria_53_10_curated
RBG_13_DPX1_53_10_RBG_13_scaffold_12610_11
RBG_13_Deltaproteobacteria_53_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9488..10036)
DNA (549bp) protein (183aa)
GTP-binding protein Tax=RBG_13_Deltaproteobacteria_53_10_curated
Hypothetical GTP-binding protein id=3865454 bin=GWF2_Syntrophobacterales_56_9 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
GTP-binding protein
RBG_13_DPX1_53_10_RBG_13_scaffold_12610_12
RBG_13_Deltaproteobacteria_53_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10033..10692)
DNA (660bp) protein (220aa)
hemolysin A; K06442 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] Tax=RBG_13_Deltaproteobacteria_53_10_curated
rRNA methyltransferase, YqxC-related, putative n=2 Tax=Geobacter metallireducens RepID=Q39WB5_GEOMG
rRNA methyltransferase
RBG_13_DPX1_53_10_RBG_13_scaffold_12610_13
RBG_13_Deltaproteobacteria_53_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10899..12842)
DNA (1944bp) protein (648aa)
1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7); K01662 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] Tax=RBG_13_Deltaproteobacteria_53_10_curated
1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7)
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NGF7_DESAR
RBG_13_DPX1_53_10_RBG_13_scaffold_12610_14
RBG_13_Deltaproteobacteria_53_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12846..13742)
DNA (897bp) protein (299aa)
polyprenyl synthetase; K13789 geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] Tax=RBG_13_Deltaproteobacteria_53_10_curated
Farnesyl-diphosphate synthase n=1 Tax=Pelobacter propionicus (strain DSM 2379) RepID=A1ARP0_PELPD
polyprenyl synthetase
RBG_13_DPX1_53_10_RBG_13_scaffold_12610_15
RBG_13_Deltaproteobacteria_53_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14891..15337
DNA (447bp) protein (149aa)
Tax=RBG_13_Deltaproteobacteria_53_10_curated
RBG_13_DPX1_53_10_RBG_13_scaffold_12610_16
RBG_13_Deltaproteobacteria_53_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15609..16355)
DNA (747bp) protein (249aa)
ABC transporter, ATP-binding protein n=1 Tax=delta proteobacterium NaphS2 RepID=D8EZF4_9DELT
ABC-type branched-chain amino acid transport systems, ATPase component Tax=RBG_13_Deltaproteobacteria_53_10_curated
ABC-type branched-chain amino acid transport systems, ATPase component
RBG_13_DPX1_53_10_RBG_13_scaffold_12610_17
RBG_13_Deltaproteobacteria_53_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17156..17728
DNA (573bp) protein (191aa)
Tax=RBG_13_Deltaproteobacteria_53_10_curated
RBG_13_DPX1_53_10_RBG_13_scaffold_12610_18
RBG_13_Deltaproteobacteria_53_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19618..19818)
DNA (201bp) protein (67aa)
Amino acid or sugar ABC transport system, permease protein n=1 Tax=delta proteobacterium NaphS2 RepID=D8EZF1_9DELT
branched-chain amino acid ABC-type transport system, permease component Tax=RBG_13_Deltaproteobacteria_53_10_curated
branched-chain amino acid ABC-type transport system, permease component
RBG_13_DPX1_53_10_RBG_13_scaffold_12610_19
RBG_13_Deltaproteobacteria_53_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20230..21474)
DNA (1245bp) protein (415aa)
Amino acid/amide ABC transporter substrate-binding protein, HAAT family n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C234_DESTA
amino acid/amide ABC transporter substrate-binding protein, HAAT family Tax=RBG_13_Deltaproteobacteria_53_10_curated
amino acid/amide ABC transporter substrate-binding protein, HAAT family
RBG_13_DPX1_53_10_RBG_13_scaffold_12610_20
RBG_13_Deltaproteobacteria_53_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21918..22202)
DNA (285bp) protein (95aa)
TRAP dicarboxylate transporter-DctM subunit n=1 Tax=Syntrophomonas wolfei subsp. wolfei (strain DSM 2245B / Goettingen) RepID=Q0B034_SYNWW
TRAP dicarboxylate transporter-DctM subunit Tax=RBG_13_Deltaproteobacteria_53_10_curated
TRAP dicarboxylate transporter-DctM subunit
Displaying 20 items

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