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RBG_13_DPX1_53_10_RBG_13_scaffold_3001

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Displaying 22 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_13_DPX1_53_10_RBG_13_scaffold_3001_1
RBG_13_Deltaproteobacteria_53_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..100)
DNA (99bp) protein (33aa)
Tax=RBG_13_Deltaproteobacteria_53_10_curated
RBG_13_DPX1_53_10_RBG_13_scaffold_3001_2
RBG_13_Deltaproteobacteria_53_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(122..691)
DNA (570bp) protein (190aa)
alkylhydroperoxidase Tax=RBG_13_Deltaproteobacteria_53_10_curated
Alkylhydroperoxidase like protein, AhpD family id=3027709 bin=GWC2_Deltaproteobacteria_66_88 species=uncultured bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Deltaproteobacteria_66_88 organism_group=Deltaproteobacteria
alkylhydroperoxidase
RBG_13_DPX1_53_10_RBG_13_scaffold_3001_3
RBG_13_Deltaproteobacteria_53_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(951..1661)
DNA (711bp) protein (237aa)
GntR family transcriptional regulator Tax=RBG_13_Deltaproteobacteria_53_10_curated
Transcriptional regulator, GntR family id=4162567 bin=GWC2_Spirochaete_52_13 species=Carboxydothermus hydrogenoformans genus=Carboxydothermus taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
GntR family transcriptional regulator
RBG_13_DPX1_53_10_RBG_13_scaffold_3001_4
RBG_13_Deltaproteobacteria_53_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2044..2385)
DNA (342bp) protein (114aa)
cytoplasmic protein Tax=RBG_13_Deltaproteobacteria_53_10_curated
HNH endonuclease id=4748959 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
cytoplasmic protein
RBG_13_DPX1_53_10_RBG_13_scaffold_3001_5
RBG_13_Deltaproteobacteria_53_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2552..2782)
DNA (231bp) protein (77aa)
Tax=RBG_13_Deltaproteobacteria_53_10_curated
RBG_13_DPX1_53_10_RBG_13_scaffold_3001_6
RBG_13_Deltaproteobacteria_53_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2946..3389
DNA (444bp) protein (148aa)
translation initiation inhibitor; K07567 TdcF protein Tax=RBG_13_Deltaproteobacteria_53_10_curated
translation initiation inhibitor; K07567 TdcF protein id=1241794 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
tdcF; translation initiation inhibitor
RBG_13_DPX1_53_10_RBG_13_scaffold_3001_7
RBG_13_Deltaproteobacteria_53_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3379..3663)
DNA (285bp) protein (95aa)
Tax=RBG_13_Deltaproteobacteria_53_10_curated
RBG_13_DPX1_53_10_RBG_13_scaffold_3001_8
RBG_13_Deltaproteobacteria_53_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4245..5057
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WPB8_METH6
hypothetical protein Tax=RBG_13_Deltaproteobacteria_53_10_curated
hypothetical protein
RBG_13_DPX1_53_10_RBG_13_scaffold_3001_9
RBG_13_Deltaproteobacteria_53_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5370..6617)
DNA (1248bp) protein (416aa)
Major facilitator superfamily MFS_1 n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C999_SPHTD
major facilitator superfamily MFS_1 Tax=RBG_13_Deltaproteobacteria_53_10_curated
major facilitator superfamily MFS_1
RBG_13_DPX1_53_10_RBG_13_scaffold_3001_10
RBG_13_Deltaproteobacteria_53_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7051..8967
DNA (1917bp) protein (639aa)
Response regulator receiver sensor signal transduction histidine kinase n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LN82_SYNFM
response regulator receiver sensor signal transduction histidine kinase Tax=RBG_13_Deltaproteobacteria_53_10_curated
response regulator receiver sensor signal transduction histidine kinase
RBG_13_DPX1_53_10_RBG_13_scaffold_3001_11
RBG_13_Deltaproteobacteria_53_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9081..9227)
DNA (147bp) protein (49aa)
Tax=RBG_13_Deltaproteobacteria_53_10_curated
RBG_13_DPX1_53_10_RBG_13_scaffold_3001_12
RBG_13_Deltaproteobacteria_53_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9306..9416)
DNA (111bp) protein (37aa)
Tax=RBG_13_Deltaproteobacteria_53_10_curated
RBG_13_DPX1_53_10_RBG_13_scaffold_3001_13
RBG_13_Deltaproteobacteria_53_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9769..10887
DNA (1119bp) protein (373aa)
oxidoreductase domain-containing protein Tax=RBG_13_Deltaproteobacteria_53_10_curated
Putative dehydrogenase protein id=3926205 bin=GWC2_Syntrophus__56_31 species=uncultured bacterium CSL12 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
oxidoreductase domain-containing protein
RBG_13_DPX1_53_10_RBG_13_scaffold_3001_14
RBG_13_Deltaproteobacteria_53_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11056..12039
DNA (984bp) protein (328aa)
hypothetical protein Tax=RBG_13_Deltaproteobacteria_53_10_curated
Putative secreted protein id=4735078 bin=GWC2_Syntrophus__56_31 species=unknown genus=Pusillimonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein
RBG_13_DPX1_53_10_RBG_13_scaffold_3001_15
RBG_13_Deltaproteobacteria_53_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12156..12632
DNA (477bp) protein (159aa)
Putative uncharacterized protein Tax=RBG_13_Deltaproteobacteria_53_10_curated
Putative uncharacterized protein id=4735076 bin=GWC2_Syntrophus__56_31 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
RBG_13_DPX1_53_10_RBG_13_scaffold_3001_16
RBG_13_Deltaproteobacteria_53_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12636..14147
DNA (1512bp) protein (504aa)
hypothetical protein Tax=RBG_13_Deltaproteobacteria_53_10_curated
hypothetical protein PJC66_20496 id=4735074 bin=GWC2_Syntrophus__56_31 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
protein of unknown function DUF112 transmembrane
RBG_13_DPX1_53_10_RBG_13_scaffold_3001_17
RBG_13_Deltaproteobacteria_53_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14800..15123
DNA (324bp) protein (108aa)
Oligopeptide/dipeptide ABC transporter ATPase n=1 Tax=Paenibacillus alvei A6-6i-x RepID=S9T7T2_PAEAL
oligopeptide/dipeptide ABC transporter ATPase subunit; K02032 peptide/nickel transport system ATP-binding protein Tax=RBG_13_Deltaproteobacteria_53_10_curated
oligopeptide/dipeptide ABC transporter ATPase subunit
RBG_13_DPX1_53_10_RBG_13_scaffold_3001_18
RBG_13_Deltaproteobacteria_53_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15310..16071)
DNA (762bp) protein (254aa)
hypothetical protein Tax=RBG_13_Deltaproteobacteria_53_10_curated
id=4416636 bin=GWC2_Nitrospirae-rel_56_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
hypothetical protein
RBG_13_DPX1_53_10_RBG_13_scaffold_3001_19
RBG_13_Deltaproteobacteria_53_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16234..16725)
DNA (492bp) protein (164aa)
Thioesterase superfamily protein n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SSP7_9BACT
thioesterase superfamily protein Tax=RBG_13_Deltaproteobacteria_53_10_curated
thioesterase superfamily protein
RBG_13_DPX1_53_10_RBG_13_scaffold_3001_20
RBG_13_Deltaproteobacteria_53_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16890..17096)
DNA (207bp) protein (69aa)
O-antigen polymerase n=1 Tax=Desulfurispirillum indicum (strain ATCC BAA-1389 / S5) RepID=E6W1Q9_DESIS
O-antigen polymerase Tax=RBG_13_Deltaproteobacteria_53_10_curated
O-antigen polymerase
RBG_13_DPX1_53_10_RBG_13_scaffold_3001_21
RBG_13_Deltaproteobacteria_53_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17096..17470)
DNA (375bp) protein (125aa)
Secreted protein n=1 Tax=sediment metagenome RepID=D9PH31_9ZZZZ
hypothetical protein Tax=RBG_13_Deltaproteobacteria_53_10_curated
hypothetical protein
RBG_13_DPX1_53_10_RBG_13_scaffold_3001_22
RBG_13_Deltaproteobacteria_53_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17570..18385)
DNA (816bp) protein (272aa)
Putative serine protease n=1 Tax=Azospirillum brasilense Sp245 RepID=G8ALU6_AZOBR
putative serine protease Tax=RBG_13_Deltaproteobacteria_53_10_curated
serine protease
Displaying 22 items

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