ggKbase home page

RBG_13_scaffold_6392_curated

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_13_scaffold_6392_curated_1
RBG_13_Chloroflexi_60_9_curated, Chloroflexi, Bacteria

Not on your lists

3..218
DNA (216bp) protein (72aa)
atm:ANT_19020 tufA; elongation factor Tu id=1247453 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
tufA; elongation factor Tu
Tax=RBG_13_Chloroflexi_60_9_curated
RBG_13_scaffold_6392_curated_2
RBG_13_Chloroflexi_60_9_curated, Chloroflexi, Bacteria

Not on your lists


228..536
DNA (309bp) protein (103aa)
30S ribosomal protein S10 n=1 Tax=uncultured bacterium RepID=K2D6V1_9BACT
rpsJ; 30S ribosomal protein S10; K02946 small subunit ribosomal protein S10
Tax=RBG_13_Chloroflexi_60_9_curated
RBG_13_scaffold_6392_curated_3
RBG_13_Chloroflexi_60_9_curated, Chloroflexi, Bacteria

Not on your lists


672..1301
DNA (630bp) protein (210aa)
atm:ANT_10040 rplC; 50S ribosomal protein L3; K02906 large subunit ribosomal protein L3 id=1247451 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi rbh
rplC; 50S ribosomal protein L3; K02906 large subunit ribosomal protein L3
Tax=RBG_13_Chloroflexi_60_9_curated
RBG_13_scaffold_6392_curated_4
RBG_13_Chloroflexi_60_9_curated, Chloroflexi, Bacteria

Not on your lists


1343..1978
DNA (636bp) protein (212aa)
rplD; 50S ribosomal protein L4; K02926 large subunit ribosomal protein L4 id=1247450 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
rplD; 50S ribosomal protein L4; K02926 large subunit ribosomal protein L4
Tax=RBG_13_Chloroflexi_60_9_curated
RBG_13_scaffold_6392_curated_5
RBG_13_Chloroflexi_60_9_curated, Chloroflexi, Bacteria

Not on your lists


1975..2280
DNA (306bp) protein (102aa)
50S ribosomal protein L23 n=1 Tax=Streptomyces sp. HGB0020 RepID=S2XTV6_9ACTO
50S ribosomal protein L23; K02892 large subunit ribosomal protein L23
Tax=RBG_13_Chloroflexi_60_9_curated
RBG_13_scaffold_6392_curated_6
RBG_13_Chloroflexi_60_9_curated, Chloroflexi, Bacteria

Not on your lists


comp(2231..2974)
DNA (744bp) protein (248aa)
Putative 50S ribosomal protein L2 n=1 Tax=Streptomyces sp. Tu6071 RepID=F3ZJ06_9ACTO
Tax=RBG_13_Chloroflexi_60_9_curated
RBG_13_scaffold_6392_curated_7
RBG_13_Chloroflexi_60_9_curated, Chloroflexi, Bacteria

Not on your lists

3154..3312
DNA (159bp) protein (53aa)
Tax=RBG_13_Chloroflexi_60_9_curated
RBG_13_scaffold_6392_curated_8
RBG_13_Chloroflexi_60_9_curated, Chloroflexi, Bacteria

Not on your lists


3305..3643
DNA (339bp) protein (113aa)
rplV; 50S ribosomal protein L22; K02890 large subunit ribosomal protein L22 id=1247446 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
rplV; 50S ribosomal protein L22; K02890 large subunit ribosomal protein L22
Tax=RBG_13_Chloroflexi_60_9_curated
RBG_13_scaffold_6392_curated_9
RBG_13_Chloroflexi_60_9_curated, Chloroflexi, Bacteria

Not on your lists


3678..4355
DNA (678bp) protein (226aa)
30S ribosomal protein S3 n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N3N0_ANATU rbh
rpsC; 30S ribosomal protein S3; K02982 small subunit ribosomal protein S3 rbh
Tax=RBG_13_Chloroflexi_60_9_curated
RBG_13_scaffold_6392_curated_10
RBG_13_Chloroflexi_60_9_curated, Chloroflexi, Bacteria

Not on your lists


4430..4855
DNA (426bp) protein (142aa)
50S ribosomal protein L16 id=4954188 bin=GWC2_Chloroflexi_49_37 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWC2_Chloroflexi_49_37 organism_group=Chloroflexi organism_desc=Good +; Candidate for curation
rplP; 50S ribosomal protein L16; K02878 large subunit ribosomal protein L16
Tax=RBG_13_Chloroflexi_60_9_curated
RBG_13_scaffold_6392_curated_11
RBG_13_Chloroflexi_60_9_curated, Chloroflexi, Bacteria

Not on your lists


4860..5075
DNA (216bp) protein (72aa)
50S ribosomal protein L29 n=1 Tax=uncultured bacterium RepID=K2DR94_9BACT
rpmC; 50S ribosomal protein L29; K02904 large subunit ribosomal protein L29
Tax=RBG_13_Chloroflexi_60_9_curated
RBG_13_scaffold_6392_curated_12
RBG_16_Chloroflexi_64_43_curated, Chloroflexi, Bacteria

Not on your lists


5228..5599
DNA (372bp) protein (124aa)
50S ribosomal protein L14 n=1 Tax=uncultured bacterium RepID=K2CTM2_9BACT
rplN; 50S ribosomal protein L14; K02874 large subunit ribosomal protein L14
Tax=RBG_16_Chloroflexi_64_43_curated
RBG_13_scaffold_6392_curated_13
RBG_13_Chloroflexi_60_9_curated, Chloroflexi, Bacteria

Not on your lists


5611..5946
DNA (336bp) protein (112aa)
50S ribosomal protein L24 n=1 Tax=Slackia piriformis YIT 12062 RepID=K0YMG0_9ACTN
rplX; 50S ribosomal protein L24
Tax=RBG_13_Chloroflexi_60_9_curated
RBG_13_scaffold_6392_curated_14
RBG_13_Chloroflexi_60_9_curated, Chloroflexi, Bacteria

Not on your lists


5958..6503
DNA (546bp) protein (182aa)
rplE; 50S ribosomal protein L5; K02931 large subunit ribosomal protein L5 id=1247439 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
rplE; 50S ribosomal protein L5; K02931 large subunit ribosomal protein L5
Tax=RBG_13_Chloroflexi_60_9_curated
RBG_13_scaffold_6392_curated_15
RBG_13_Chloroflexi_60_9_curated, Chloroflexi, Bacteria

Not on your lists


6510..6692
DNA (183bp) protein (61aa)
rpsN; 30S ribosomal protein S14; K02954 small subunit ribosomal protein S14 id=1247438 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
rpsN; 30S ribosomal protein S14; K02954 small subunit ribosomal protein S14
Tax=RBG_13_Chloroflexi_60_9_curated
RBG_13_scaffold_6392_curated_16
RBG_13_Chloroflexi_60_9_curated, Chloroflexi, Bacteria

Not on your lists


6732..7142
DNA (411bp) protein (137aa)
30S ribosomal protein S8 n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N3N8_ANATU
rpsH; 30S ribosomal protein S8; K02994 small subunit ribosomal protein S8
Tax=RBG_13_Chloroflexi_60_9_curated
RBG_13_scaffold_6392_curated_17
RBG_13_Chloroflexi_60_9_curated, Chloroflexi, Bacteria

Not on your lists


7267..7746
DNA (480bp) protein (160aa)
rplF; 50S ribosomal protein L6; K02933 large subunit ribosomal protein L6 id=1247436 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
rplF; 50S ribosomal protein L6; K02933 large subunit ribosomal protein L6
Tax=RBG_13_Chloroflexi_60_9_curated
RBG_13_scaffold_6392_curated_18
RBG_13_Chloroflexi_60_9_curated, Chloroflexi, Bacteria

Not on your lists


7864..8229
DNA (366bp) protein (122aa)
50S ribosomal protein L18 n=1 Tax=unclassified candidate division EM 19 RepID=UPI00036244C8
50S ribosomal protein L18; K02881 large subunit ribosomal protein L18
Tax=RBG_13_Chloroflexi_60_9_curated
RBG_13_scaffold_6392_curated_19
RBG_13_Chloroflexi_60_9_curated, Chloroflexi, Bacteria

Not on your lists


comp(8236..8718)
DNA (483bp) protein (161aa)
50S ribosomal protein L18 n=1 Tax=Burkholderia pseudomallei RepID=UPI00016B0FEC
ribosomal protein
Tax=RBG_13_Chloroflexi_60_9_curated
RBG_13_scaffold_6392_curated_20
RBG_13_Chloroflexi_60_9_curated, Chloroflexi, Bacteria

Not on your lists


8829..9083
DNA (255bp) protein (85aa)
50S ribosomal protein L30 n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N3P2_ANATU
rpmD; 50S ribosomal protein L30; K02907 large subunit ribosomal protein L30
Tax=RBG_13_Chloroflexi_60_9_curated
RBG_13_scaffold_6392_curated_21
RBG_13_Chloroflexi_60_9_curated, Chloroflexi, Bacteria

Not on your lists


9080..9730
DNA (651bp) protein (217aa)
50S ribosomal protein L15 n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N3P3_ANATU
rplO; 50S ribosomal protein L15; K02876 large subunit ribosomal protein L15
Tax=RBG_13_Chloroflexi_60_9_curated
RBG_13_scaffold_6392_curated_22
RBG_13_Chloroflexi_60_9_curated, Chloroflexi, Bacteria

Not on your lists


9761..11110
DNA (1350bp) protein (450aa)
atm:ANT_10240 secY; preprotein translocase secY subunit; K03076 preprotein translocase subunit SecY id=1247432 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi rbh
secY; preprotein translocase secY subunit; K03076 preprotein translocase subunit SecY rbh
Tax=RBG_13_Chloroflexi_60_9_curated
RBG_13_scaffold_6392_curated_23
RBG_13_Chloroflexi_60_9_curated, Chloroflexi, Bacteria

Not on your lists

11385..11762
DNA (378bp) protein (126aa)
adk; adenylate kinase; K00939 adenylate kinase [EC:2.7.4.3]
Adenylate kinase id=1722546 bin=GWB2_Chloroflexi_54_36 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
Tax=RBG_13_Chloroflexi_60_9_curated
RBG_13_scaffold_6392_curated_24
RBG_13_Chloroflexi_60_9_curated, Chloroflexi, Bacteria

Not on your lists

11771..12538
DNA (768bp) protein (256aa)
map; methionine aminopeptidase (EC:3.4.11.18); K01265 methionyl aminopeptidase [EC:3.4.11.18] rbh
Methionine aminopeptidase id=4954203 bin=GWC2_Chloroflexi_49_37 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWC2_Chloroflexi_49_37 organism_group=Chloroflexi organism_desc=Good +; Candidate for curation rbh
Tax=RBG_13_Chloroflexi_60_9_curated
RBG_13_scaffold_6392_curated_25
RBG_13_Chloroflexi_60_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(12439..12663)
DNA (225bp) protein (75aa)
Tax=RBG_13_Chloroflexi_60_9_curated
RBG_13_scaffold_6392_curated_26
RBG_13_Chloroflexi_60_9_curated, Chloroflexi, Bacteria

Not on your lists


12767..13156
DNA (390bp) protein (130aa)
30S ribosomal protein S13 n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N3P8_ANATU
rpsM; 30S ribosomal protein S13; K02952 small subunit ribosomal protein S13
Tax=RBG_13_Chloroflexi_60_9_curated
RBG_13_scaffold_6392_curated_27
RBG_13_Chloroflexi_60_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(13413..13577)
DNA (165bp) protein (55aa)
Tax=RBG_13_Chloroflexi_60_9_curated
RBG_13_scaffold_6392_curated_28
RBG_13_Chloroflexi_60_9_curated, Chloroflexi, Bacteria

Not on your lists


13905..14276
DNA (372bp) protein (124aa)
rpsD; 30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 id=1247426 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
rpsD; 30S ribosomal protein S4; K02986 small subunit ribosomal protein S4
Tax=RBG_13_Chloroflexi_60_9_curated
RBG_13_scaffold_6392_curated_29
RBG_13_Chloroflexi_60_9_curated, Chloroflexi, Bacteria

Not on your lists

14384..15373
DNA (990bp) protein (330aa)
atm:ANT_10310 rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6); K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] id=1247425 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi rbh
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6); K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] rbh
Tax=RBG_13_Chloroflexi_60_9_curated
RBG_13_scaffold_6392_curated_30
RBG_13_Chloroflexi_60_9_curated, Chloroflexi, Bacteria

Not on your lists


15380..15754
DNA (375bp) protein (125aa)
50S ribosomal protein L17 n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N3Q2_ANATU
rplQ; 50S ribosomal protein L17; K02879 large subunit ribosomal protein L17
Tax=RBG_13_Chloroflexi_60_9_curated
Displaying items 1-30 of 31 in total

View Taxonomy