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RBG_13_scaffold_9177_curated

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_13_scaffold_9177_curated_1
RBG_13_WOR_2_44_8_curated, WOR-2, Bacteria

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253..1572
DNA (1320bp) protein (440aa)
Ethanolamine utilization Fe-S center protein eut n=1 Tax=Heliobacillus mobilis RepID=Q0PIB6_HELMO rbh
respiratory-chain NADH dehydrogenase domain 51 kDa subunit rbh
Tax=RBG_13_WOR_2_44_8_curated
RBG_13_scaffold_9177_curated_2
RBG_13_WOR_2_44_8_curated, WOR-2, Bacteria

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1582..2133
DNA (552bp) protein (184aa)
hypothetical protein n=1 Tax=Desulfurispora thermophila RepID=UPI00037CADCA
microcompartments protein
Tax=RBG_13_WOR_2_44_8_curated
RBG_13_scaffold_9177_curated_3
RBG_13_WOR_2_44_8_curated, WOR-2, Bacteria

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comp(2300..2479)
DNA (180bp) protein (60aa)
Tax=RBG_13_WOR_2_44_8_curated
RBG_13_scaffold_9177_curated_4
RBG_13_WOR_2_44_8_curated, WOR-2, Bacteria

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comp(2834..2986)
DNA (153bp) protein (51aa)
Tax=RBG_13_WOR_2_44_8_curated
RBG_13_scaffold_9177_curated_5
RBG_13_WOR_2_44_8_curated, WOR-2, Bacteria

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5276..6685
DNA (1410bp) protein (470aa)
glmU; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; K04042 bifunctional UDP-N-acetylglucosamine pyrophosphorylase / Glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] id=14426672 bin=bin1_lowGC species=Pelotomaculum thermopropionicum genus=Pelotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin1_lowGC organism_group=Unknown_CP rbh
UDP-N-acetylglucosamine pyrophosphorylase; K04042 bifunctional UDP-N-acetylglucosamine pyrophosphorylase / Glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] rbh
Tax=RBG_13_WOR_2_44_8_curated
RBG_13_scaffold_9177_curated_6
RBG_13_WOR_2_44_8_curated, WOR-2, Bacteria

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comp(6629..7138)
DNA (510bp) protein (170aa)
Tax=RBG_13_WOR_2_44_8_curated
RBG_13_scaffold_9177_curated_7
RBG_13_WOR_2_44_8_curated, WOR-2, Bacteria

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7332..7670
DNA (339bp) protein (113aa)
phosphoribosylpyrophosphate synthetase; K00948 ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
Ribose-phosphate pyrophosphokinase id=5800587 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Tax=RBG_13_WOR_2_44_8_curated
RBG_13_scaffold_9177_curated_8
unknown

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comp(7774..7908)
DNA (135bp) protein (45aa)

This feature has no annotations

RBG_13_scaffold_9177_curated_9
RBG_13_WOR_2_44_8_curated, WOR-2, Bacteria

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8414..8983
DNA (570bp) protein (190aa)
pth; peptidyl-tRNA hydrolase; K01056 peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
Peptidyl-tRNA hydrolase n=1 Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=PTH_PELCD
Tax=RBG_13_WOR_2_44_8_curated
RBG_13_scaffold_9177_curated_10
RBG_13_WOR_2_44_8_curated, WOR-2, Bacteria

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comp(8961..9134)
DNA (174bp) protein (58aa)
Tax=RBG_13_WOR_2_44_8_curated
RBG_13_scaffold_9177_curated_11
RBG_13_WOR_2_44_8_curated, WOR-2, Bacteria

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comp(9237..9731)
DNA (495bp) protein (165aa)
Tax=RBG_13_WOR_2_44_8_curated
RBG_13_scaffold_9177_curated_12
RBG_13_WOR_2_44_8_curated, WOR-2, Bacteria

Not on your lists

10722..12068
DNA (1347bp) protein (449aa)
mfd; transcription-repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-] rbh
Transcription-repair-coupling factor n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67JD3_SYMTH rbh
Tax=RBG_13_WOR_2_44_8_curated
RBG_13_scaffold_9177_curated_13
RBG_13_WOR_2_44_8_curated, WOR-2, Bacteria

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12662..12874
DNA (213bp) protein (71aa)
mazG; nucleoside triphosphate pyrophosphohydrolase; K02428 dITP/XTP pyrophosphatase [EC:3.6.1.19]
MazG family protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PIE4_CHIPD
Tax=RBG_13_WOR_2_44_8_curated
RBG_13_scaffold_9177_curated_14
RBG_13_WOR_2_44_8_curated, WOR-2, Bacteria

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13063..14157
DNA (1095bp) protein (365aa)
Enolase n=1 Tax=Thermoanaerobacterium saccharolyticum (strain DSM 8691 / JW/SL-YS485) RepID=I3VY85_THESW rbh
enolase rbh
Tax=RBG_13_WOR_2_44_8_curated
RBG_13_scaffold_9177_curated_15
RBG_13_WOR_2_44_8_curated, WOR-2, Bacteria

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14167..15582
DNA (1416bp) protein (472aa)
pyruvate kinase; K00873 pyruvate kinase [EC:2.7.1.40] rbh
Pyruvate kinase n=1 Tax=Caldalkalibacillus thermarum TA2.A1 RepID=F5L940_9BACI rbh
Tax=RBG_13_WOR_2_44_8_curated
RBG_13_scaffold_9177_curated_16
RBG_13_WOR_2_44_8_curated, WOR-2, Bacteria

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comp(16245..16517)
DNA (273bp) protein (91aa)
Tax=RBG_13_WOR_2_44_8_curated
RBG_13_scaffold_9177_curated_17
RBG_13_WOR_2_44_8_curated, WOR-2, Bacteria

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17386..17655
DNA (270bp) protein (90aa)
Tax=RBG_13_WOR_2_44_8_curated
RBG_13_scaffold_9177_curated_18
RBG_13_WOR_2_44_8_curated, WOR-2, Bacteria

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17655..18641
DNA (987bp) protein (329aa)
exopolyphosphatase; K01524 exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
Ppx/GppA phosphatase family protein n=1 Tax=Clostridium sordellii VPI 9048 RepID=T0CKJ1_CLOSO
Tax=RBG_13_WOR_2_44_8_curated
RBG_13_scaffold_9177_curated_19
RBG_13_WOR_2_44_8_curated, WOR-2, Bacteria

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18865..19128
DNA (264bp) protein (88aa)
Tax=RBG_13_WOR_2_44_8_curated
RBG_13_scaffold_9177_curated_20
RBG_13_WOR_2_44_8_curated, WOR-2, Bacteria

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comp(19184..19396)
DNA (213bp) protein (71aa)
Tax=RBG_13_WOR_2_44_8_curated
RBG_13_scaffold_9177_curated_21
unknown

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19866..19925
DNA (60bp) protein (20aa)

This feature has no annotations

Displaying 21 items

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