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RBG_13_scaffold_31337_curated

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_13_scaffold_31337_curated_1
RBG_13_WOR_2_44_8_curated, WOR-2, Bacteria

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comp(1..267)
DNA (267bp) protein (89aa)
aroB; 3-dehydroquinate synthase; K01735 3-dehydroquinate synthase [EC:4.2.3.4]
3-dehydroquinate synthase n=1 Tax=Prochlorococcus marinus (strain SARG / CCMP1375 / SS120) RepID=AROB_PROMA
Tax=RBG_13_WOR_2_44_8_curated
RBG_13_scaffold_31337_curated_2
RBG_13_WOR_2_44_8_curated, WOR-2, Bacteria

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comp(761..1303)
DNA (543bp) protein (181aa)
AroK; shikimate kinase; K00891 shikimate kinase [EC:2.7.1.71]
Shikimate kinase n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=AROK_PELTS
Tax=RBG_13_WOR_2_44_8_curated
RBG_13_scaffold_31337_curated_3
RBG_13_WOR_2_44_8_curated, WOR-2, Bacteria

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comp(1269..2417)
DNA (1149bp) protein (383aa)
aroC; chorismate synthase (EC:4.2.3.5) rbh
Chorismate synthase n=1 Tax=Carnobacterium maltaromaticum LMA28 RepID=K8E1L0_CARML rbh
Tax=RBG_13_WOR_2_44_8_curated
RBG_13_scaffold_31337_curated_4
RBG_13_WOR_2_44_8_curated, WOR-2, Bacteria

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comp(2452..2928)
DNA (477bp) protein (159aa)
Type IV pilus assembly protein PilM n=1 Tax=Oceanithermus profundus (strain DSM 14977 / NBRC 100410 / VKM B-2274 / 506) RepID=E4U914_OCEP5
type IV pilus assembly protein pilm; K02662 type IV pilus assembly protein PilM
Tax=RBG_13_WOR_2_44_8_curated
RBG_13_scaffold_31337_curated_5
RBG_13_WOR_2_44_8_curated, WOR-2, Bacteria

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3074..3589
DNA (516bp) protein (172aa)
Tax=RBG_13_WOR_2_44_8_curated
RBG_13_scaffold_31337_curated_6
RBG_13_WOR_2_44_8_curated, WOR-2, Bacteria

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comp(3697..3948)
DNA (252bp) protein (84aa)
prepilin peptidase (EC:3.4.23.43); K02654 leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
Prepilin peptidase n=1 Tax=Clostridium intestinale URNW RepID=U2Q854_9CLOT
Tax=RBG_13_WOR_2_44_8_curated
RBG_13_scaffold_31337_curated_7
RBG_13_WOR_2_44_8_curated, WOR-2, Bacteria

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comp(4285..4533)
DNA (249bp) protein (83aa)
Shikimate dehydrogenase n=2 Tax=Methanosarcina mazei RepID=AROE_METMA
Shikimate 5-dehydrogenase I alpha
Tax=RBG_13_WOR_2_44_8_curated
RBG_13_scaffold_31337_curated_8
RBG_13_WOR_2_44_8_curated, WOR-2, Bacteria

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comp(5275..5778)
DNA (504bp) protein (168aa)
HAD family hydrolase n=1 Tax=Clostridium papyrosolvens C7 RepID=U4R2Y0_9CLOT
HAD phosphatase subfamily IIIA; K07015
Tax=RBG_13_WOR_2_44_8_curated
RBG_13_scaffold_31337_curated_9
RBG_13_WOR_2_44_8_curated, WOR-2, Bacteria

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comp(5789..6601)
DNA (813bp) protein (271aa)
Aminodeoxychorismate lyase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AWA4_RUBXD
aminodeoxychorismate lyase; K07082 UPF0755 protein
Tax=RBG_13_WOR_2_44_8_curated
RBG_13_scaffold_31337_curated_10
RBG_13_WOR_2_44_8_curated, WOR-2, Bacteria

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comp(6787..7185)
DNA (399bp) protein (133aa)
Holliday junction resolvase; K07447 putative holliday junction resolvase [EC:3.1.-.-]
Putative Holliday junction resolvase id=1853749 bin=GWD2_RBX1-related_39_127 species=Desulfosporosinus acidiphilus genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
Tax=RBG_13_WOR_2_44_8_curated
RBG_13_scaffold_31337_curated_11
RBG_13_WOR_2_44_8_curated, WOR-2, Bacteria

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comp(7182..8234)
DNA (1053bp) protein (351aa)
alanyl-tRNA synthetase; K01872 alanyl-tRNA synthetase [EC:6.1.1.7]
Alanine--tRNA ligase n=1 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9RXN6_THEOJ
Tax=RBG_13_WOR_2_44_8_curated
RBG_13_scaffold_31337_curated_12
RBG_13_Actinobacteria_35_12_curated, Actinobacteria, Bacteria

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comp(9645..10157)
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9S3C0_THEOJ
hypothetical protein
Tax=RBG_13_Actinobacteria_35_12_curated
Displaying 12 items

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