ggKbase home page

RBG_13_scaffold_7890_curated

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_13_scaffold_7890_curated_1
RBG_13_OP11_Shapirobacteria_44_7_curated, Shapirobacteria, Microgenomates, Bacteria

Not on your lists

359..907
DNA (549bp) protein (183aa)
serS; seryl-tRNA synthetase (EC:6.1.1.11); K01875 seryl-tRNA synthetase [EC:6.1.1.11]
hypothetical protein n=1 Tax=candidate division OP11 bacterium SCGC AAA011-J08 RepID=UPI00036A303C
Tax=RBG_13_OP11_Shapirobacteria_44_7_curated
RBG_13_scaffold_7890_curated_2
RBG_13_OP11_Shapirobacteria_44_7_curated, Shapirobacteria, Microgenomates, Bacteria

Not on your lists

992..3646
DNA (2655bp) protein (885aa)
secA; preprotein translocase subunit SecA; K03070 preprotein translocase subunit SecA id=15191693 bin=GWC1_OP11_49_16_COMPLETE species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates) rbh
Preprotein translocase subunit SecA; K03070 preprotein translocase subunit SecA rbh
Tax=RBG_13_OP11_Shapirobacteria_44_7_curated
RBG_13_scaffold_7890_curated_3
RBG_13_OP11_Shapirobacteria_44_7_curated, Shapirobacteria, Microgenomates, Bacteria

Not on your lists

comp(3656..4204)
DNA (549bp) protein (183aa)
oligoribonuclease, mitochondrial; K13288 oligoribonuclease [EC:3.1.-.-]
AAEL008865-PC n=2 Tax=Aedes aegypti RepID=Q16XI3_AEDAE
Tax=RBG_13_OP11_Shapirobacteria_44_7_curated
RBG_13_scaffold_7890_curated_4
RBG_13_OP11_Shapirobacteria_44_7_curated, Shapirobacteria, Microgenomates, Bacteria

Not on your lists

4226..4627
DNA (402bp) protein (134aa)
hypothetical protein; K02503 Hit-like protein involved in cell-cycle regulation id=5102008 bin=GWF1_WS6_37_7 species=WS6_GWF1_36_7 genus=WS6_GWF1_36_7 taxon_order=WS6_GWF1_36_7 taxon_class=WS6_GWF1_36_7 phylum=WS6 tax=GWF1_WS6_37_7 organism_group=WS6 (Doikabacteria)
histidine triad (HIT) protein; K02503 Hit-like protein involved in cell-cycle regulation
Tax=RBG_13_OP11_Shapirobacteria_44_7_curated
RBG_13_scaffold_7890_curated_5
RBG_13_OP11_Shapirobacteria_44_7_curated, Shapirobacteria, Microgenomates, Bacteria

Not on your lists

4627..4920
DNA (294bp) protein (98aa)
Tax=RBG_13_OP11_Shapirobacteria_44_7_curated
RBG_13_scaffold_7890_curated_6
RBG_13_OP11_Shapirobacteria_44_7_curated, Shapirobacteria, Microgenomates, Bacteria

Not on your lists

comp(4889..6739)
DNA (1851bp) protein (617aa)
GTP-binding protein TypA/BipA id=1903120 bin=GWE2_CPR3_35_7 species=ACD12 genus=ACD12 taxon_order=ACD12 taxon_class=ACD12 phylum=OP11 tax=GWE2_CPR3_35_7 organism_group=CPR3 organism_desc=Good rbh
GTP-binding protein TypA/BipA; K06207 GTP-binding protein rbh
Tax=RBG_13_OP11_Shapirobacteria_44_7_curated
RBG_13_scaffold_7890_curated_7
RBG_13_OP11_Shapirobacteria_44_7_curated, Shapirobacteria, Microgenomates, Bacteria

Not on your lists

7298..7879
DNA (582bp) protein (194aa)
Putative peptidyl-prolyl cis-trans isomerase n=1 Tax=Bacteriovorax marinus (strain ATCC BAA-682 / DSM 15412 / SJ) RepID=E1X2W3_BACMS
putative peptidyl-prolyl cis-trans isomerase
Tax=RBG_13_OP11_Shapirobacteria_44_7_curated
RBG_13_scaffold_7890_curated_8
RBG_13_OP11_Shapirobacteria_44_7_curated, Shapirobacteria, Microgenomates, Bacteria

Not on your lists

7876..8253
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1ZF99_9BACT
Tax=RBG_13_OP11_Shapirobacteria_44_7_curated
RBG_13_scaffold_7890_curated_9
RBG_13_OP11_Shapirobacteria_44_7_curated, Shapirobacteria, Microgenomates, Bacteria

Not on your lists

8257..8622
DNA (366bp) protein (122aa)
Tax=RBG_13_OP11_Shapirobacteria_44_7_curated
RBG_13_scaffold_7890_curated_10
RBG_13_OP11_Shapirobacteria_44_7_curated, Shapirobacteria, Microgenomates, Bacteria

Not on your lists

comp(9197..9379)
DNA (183bp) protein (61aa)
Tax=RBG_13_OP11_Shapirobacteria_44_7_curated
RBG_13_scaffold_7890_curated_11
RBG_13_OP11_Shapirobacteria_44_7_curated, Shapirobacteria, Microgenomates, Bacteria

Not on your lists

9676..10674
DNA (999bp) protein (333aa)
Tax=RBG_13_OP11_Shapirobacteria_44_7_curated
RBG_13_scaffold_7890_curated_12
RBG_13_OP11_Shapirobacteria_44_7_curated, Shapirobacteria, Microgenomates, Bacteria

Not on your lists

10695..11159
DNA (465bp) protein (155aa)
transmembrane_regions 37..59 id=91567 bin=ACD61 species=ACD61 genus=ACD61 taxon_order=ACD61 taxon_class=ACD61 phylum=OP11 tax=ACD61 organism_group=OP11 (Microgenomates) organism_desc=OP11
Tax=RBG_13_OP11_Shapirobacteria_44_7_curated
RBG_13_scaffold_7890_curated_13
RBG_13_OP11_Shapirobacteria_44_7_curated, Shapirobacteria, Microgenomates, Bacteria

Not on your lists

11469..11849
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DCF3_9BACT
ftsE; FtsE; K09812 cell division transport system ATP-binding protein
Tax=RBG_13_OP11_Shapirobacteria_44_7_curated
RBG_13_scaffold_7890_curated_14
RBG_13_OP11_Shapirobacteria_44_7_curated, Shapirobacteria, Microgenomates, Bacteria

Not on your lists

11836..12222
DNA (387bp) protein (129aa)
Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EB60_9CLOT id=28885 bin=ACD24 species=Clostridium methylpentosum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=ACD24 organism_group=WWE3 organism_desc=WWE3
ftsX; Cell division protein FtsX
Tax=RBG_13_OP11_Shapirobacteria_44_7_curated
RBG_13_scaffold_7890_curated_15
RBG_13_OP11_Shapirobacteria_44_7_curated, Shapirobacteria, Microgenomates, Bacteria

Not on your lists

12357..12668
DNA (312bp) protein (104aa)
Cell division protein FtsX n=1 Tax=uncultured bacterium RepID=K2D8Q8_9BACT
Tax=RBG_13_OP11_Shapirobacteria_44_7_curated
RBG_13_scaffold_7890_curated_16
RBG_13_OP11_Shapirobacteria_44_7_curated, Shapirobacteria, Microgenomates, Bacteria

Not on your lists

12671..13768
DNA (1098bp) protein (366aa)
hypothetical protein id=5084089 bin=GWA2_OP11_43_14 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWA2_OP11_43_14 organism_group=OP11 (Microgenomates) organism_desc=GWA2_OP11_2
Tax=RBG_13_OP11_Shapirobacteria_44_7_curated
RBG_13_scaffold_7890_curated_17
RBG_13_OP11_Shapirobacteria_44_7_curated, Shapirobacteria, Microgenomates, Bacteria

Not on your lists

comp(13770..14393)
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2D1W3_9BACT
Tax=RBG_13_OP11_Shapirobacteria_44_7_curated
RBG_13_scaffold_7890_curated_18
RBG_13_OP11_Shapirobacteria_44_7_curated, Shapirobacteria, Microgenomates, Bacteria

Not on your lists

14481..16397
DNA (1917bp) protein (639aa)
PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase n=1 Tax=cyanobacterium UCYN-A RepID=D3EQM4_UCYNA id=5086573 bin=GWF1_OP11_31_35_complete species=cyanobacterium UCYN-A genus=unknown taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWF1_OP11_31_35_complete organism_group=OP11 (Microgenomates) organism_desc=Complete genome (was OP11_1) rbh
cell wall biosynthesis glycosyltransferase
Tax=RBG_13_OP11_Shapirobacteria_44_7_curated
RBG_13_scaffold_7890_curated_19
RBG_13_OP11_Shapirobacteria_44_7_curated, Shapirobacteria, Microgenomates, Bacteria

Not on your lists

16398..16925
DNA (528bp) protein (176aa)
id=5086571 bin=GWF1_OP11_31_35_complete species=OP11_1 genus=OP11_1 taxon_order=OP11_1 taxon_class=OP11_1 phylum=OP11 tax=GWF1_OP11_31_35_complete organism_group=OP11 (Microgenomates) organism_desc=Complete genome (was OP11_1)
Tax=RBG_13_OP11_Shapirobacteria_44_7_curated
Displaying 19 items

View Taxonomy