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RBG_13_scaffold_2594_curated

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_13_scaffold_2594_curated_1
RBG_13_OP11_Shapirobacteria_44_7_curated, Shapirobacteria, Microgenomates, Bacteria

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1683..3167
DNA (1485bp) protein (495aa)
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6); K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] id=75717 bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11 rbh
RpoC; DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6); K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] rbh
Tax=RBG_13_OP11_Shapirobacteria_44_7_curated
RBG_13_scaffold_2594_curated_2
RBG_13_OP11_Shapirobacteria_44_7_curated, Shapirobacteria, Microgenomates, Bacteria

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3170..3592
DNA (423bp) protein (141aa)
30S ribosomal protein S12 n=1 Tax=uncultured bacterium RepID=K2CDD2_9BACT
30S ribosomal protein S12; K02950 small subunit ribosomal protein S12
Tax=RBG_13_OP11_Shapirobacteria_44_7_curated
RBG_13_scaffold_2594_curated_3
RBG_13_OP11_Shapirobacteria_44_7_curated, Shapirobacteria, Microgenomates, Bacteria

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3561..4082
DNA (522bp) protein (174aa)
rpsG; 30S ribosomal protein S7; K02992 small subunit ribosomal protein S7 id=7081 bin=ACD13 species=ACD13 genus=ACD13 taxon_order=ACD13 taxon_class=ACD13 phylum=OP11 tax=ACD13 organism_group=OP11 (Microgenomates) organism_desc=OP11
rpsG; 30S ribosomal protein S7; K02992 small subunit ribosomal protein S7
Tax=RBG_13_OP11_Shapirobacteria_44_7_curated
RBG_13_scaffold_2594_curated_4
RBG_13_OP11_Shapirobacteria_44_7_curated, Shapirobacteria, Microgenomates, Bacteria

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4100..5494
DNA (1395bp) protein (465aa)
Tax=RBG_13_OP11_Shapirobacteria_44_7_curated
RBG_13_scaffold_2594_curated_5
RBG_13_OP11_Shapirobacteria_44_7_curated, Shapirobacteria, Microgenomates, Bacteria

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5539..6183
DNA (645bp) protein (215aa)
rbfA; glucose-1-phosphate thymidylyltransferase; K00973 glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA036-E14 RepID=UPI00036B2107
Tax=RBG_13_OP11_Shapirobacteria_44_7_curated
RBG_13_scaffold_2594_curated_6
RBG_13_OP11_Shapirobacteria_44_7_curated, Shapirobacteria, Microgenomates, Bacteria

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6180..7181
DNA (1002bp) protein (334aa)
dTDP-glucose 4,6-dehydratase (EC:4.2.1.46); K01710 dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] id=15191629 bin=GWC1_OP11_49_16_COMPLETE species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates) rbh
dTDP-glucose 4,6-dehydratase (EC:4.2.1.46) rbh
Tax=RBG_13_OP11_Shapirobacteria_44_7_curated
RBG_13_scaffold_2594_curated_7
RBG_13_OP11_Shapirobacteria_44_7_curated, Shapirobacteria, Microgenomates, Bacteria

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7181..7750
DNA (570bp) protein (190aa)
dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13); K01790 dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
dTDP-4-dehydrorhamnose 3,5-epimerase n=1 Tax=Pseudomonas sp. GM79 RepID=J2XP47_9PSED
Tax=RBG_13_OP11_Shapirobacteria_44_7_curated
RBG_13_scaffold_2594_curated_8
RBG_13_OP11_Shapirobacteria_44_7_curated, Shapirobacteria, Microgenomates, Bacteria

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7747..8637
DNA (891bp) protein (297aa)
dTDP-4-dehydrorhamnose reductase id=15191627 bin=GWC1_OP11_49_16_COMPLETE species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates)
hypothetical protein
Tax=RBG_13_OP11_Shapirobacteria_44_7_curated
RBG_13_scaffold_2594_curated_9
RBG_13_OP11_Shapirobacteria_44_7_curated, Shapirobacteria, Microgenomates, Bacteria

Not on your lists

comp(8588..9721)
DNA (1134bp) protein (378aa)
hypothetical protein id=23178 bin=ACD22 species=ACD22 genus=ACD22 taxon_order=ACD22 taxon_class=ACD22 phylum=WWE3 tax=ACD22 organism_group=WWE3 organism_desc=WWE3
protoporphyrinogen oxidase
Tax=RBG_13_OP11_Shapirobacteria_44_7_curated
RBG_13_scaffold_2594_curated_10
RBG_13_OP11_Shapirobacteria_44_7_curated, Shapirobacteria, Microgenomates, Bacteria

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9807..11918
DNA (2112bp) protein (704aa)
csc:Csac_0957 elongation factor G; K02355 elongation factor EF-G [EC:3.6.5.3] id=72630 bin=ACD50 species=ACD50 genus=ACD50 taxon_order=ACD50 taxon_class=ACD50 phylum=OP11 tax=ACD50 organism_group=OP11 (Microgenomates) organism_desc=OP11 rbh
translation elongation factor G; K02355 elongation factor G rbh
Tax=RBG_13_OP11_Shapirobacteria_44_7_curated
RBG_13_scaffold_2594_curated_11
RBG_13_OP11_Shapirobacteria_44_7_curated, Shapirobacteria, Microgenomates, Bacteria

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12033..13208
DNA (1176bp) protein (392aa)
tuf; elongation factor Tu (EC:3.6.5.3) rbh
tuf; translation elongation factor Tu; K02358 elongation factor Tu id=14423846 bin=bin11_novelCP species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=bin11_novelCP organism_group=Unknown_CP rbh
Tax=RBG_13_OP11_Shapirobacteria_44_7_curated
RBG_13_scaffold_2594_curated_12
RBG_13_OP11_Shapirobacteria_44_7_curated, Shapirobacteria, Microgenomates, Bacteria

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13272..13583
DNA (312bp) protein (104aa)
30S ribosomal protein S10 n=1 Tax=uncultured bacterium RepID=K2BK40_9BACT
rpsJ; 30S ribosomal protein S10; K02946 small subunit ribosomal protein S10
Tax=RBG_13_OP11_Shapirobacteria_44_7_curated
RBG_13_scaffold_2594_curated_13
RBG_13_OP11_Shapirobacteria_44_7_curated, Shapirobacteria, Microgenomates, Bacteria

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13589..14212
DNA (624bp) protein (208aa)
50S ribosomal protein L3 id=4071540 bin=GWF2_CPR3_35_18 species=Herpetosiphon aurantiacus genus=Herpetosiphon taxon_order=Herpetosiphonales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWF2_CPR3_35_18 organism_group=CPR3
50S ribosomal protein L3; K02906 large subunit ribosomal protein L3
Tax=RBG_13_OP11_Shapirobacteria_44_7_curated
RBG_13_scaffold_2594_curated_14
RBG_13_OP11_Shapirobacteria_44_7_curated, Shapirobacteria, Microgenomates, Bacteria

Not on your lists

comp(14943..15239)
DNA (297bp) protein (99aa)
Tax=RBG_13_OP11_Shapirobacteria_44_7_curated
RBG_13_scaffold_2594_curated_15
RBG_13_OP11_Shapirobacteria_44_7_curated, Shapirobacteria, Microgenomates, Bacteria

Not on your lists


15252..15464
DNA (213bp) protein (71aa)
hypothetical protein n=1 Tax=Microgenomates bacterium SCGC AAA255-J07 RepID=UPI00036901D7
50S ribosomal protein L2
Tax=RBG_13_OP11_Shapirobacteria_44_7_curated
RBG_13_scaffold_2594_curated_16
RBG_13_OP11_Shapirobacteria_44_7_curated, Shapirobacteria, Microgenomates, Bacteria

Not on your lists


15469..15744
DNA (276bp) protein (92aa)
30S ribosomal protein S19; K02965 small subunit ribosomal protein S19 id=15191855 bin=GWC1_OP11_49_16_COMPLETE species=RAAC19 genus=RAAC19 taxon_order=RAAC19 taxon_class=RAAC19 phylum=OP11 tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates)
30S ribosomal protein S19; K02965 small subunit ribosomal protein S19
Tax=RBG_13_OP11_Shapirobacteria_44_7_curated
RBG_13_scaffold_2594_curated_17
RBG_13_OP11_Shapirobacteria_44_7_curated, Shapirobacteria, Microgenomates, Bacteria

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16030..16188
DNA (159bp) protein (53aa)
Tax=RBG_13_OP11_Shapirobacteria_44_7_curated
RBG_13_scaffold_2594_curated_18
RBG_13_OP11_Shapirobacteria_44_7_curated, Shapirobacteria, Microgenomates, Bacteria

Not on your lists


16172..16813
DNA (642bp) protein (214aa)
30S ribosomal protein S3 n=1 Tax=uncultured organism RepID=U3GQ76_9ZZZZ
rpsC; ribosomal protein S3; K02982 small subunit ribosomal protein S3
Tax=RBG_13_OP11_Shapirobacteria_44_7_curated
RBG_13_scaffold_2594_curated_19
RBG_13_OP11_Shapirobacteria_44_7_curated, Shapirobacteria, Microgenomates, Bacteria

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16801..17220
DNA (420bp) protein (140aa)
rplP; 50S ribosomal protein L16; K02878 large subunit ribosomal protein L16 id=15191852 bin=GWC1_OP11_49_16_COMPLETE species=WS6_GWF1_36_7 genus=WS6_GWF1_36_7 taxon_order=WS6_GWF1_36_7 taxon_class=WS6_GWF1_36_7 phylum=WS6 tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates)
ribosomal protein L16, bacterial/organelle
Tax=RBG_13_OP11_Shapirobacteria_44_7_curated
RBG_13_scaffold_2594_curated_20
RBG_13_OP11_Shapirobacteria_44_7_curated, Shapirobacteria, Microgenomates, Bacteria

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17231..17440
DNA (210bp) protein (70aa)
Tax=RBG_13_OP11_Shapirobacteria_44_7_curated
RBG_13_scaffold_2594_curated_21
RBG_13_OP11_Shapirobacteria_44_7_curated, Shapirobacteria, Microgenomates, Bacteria

Not on your lists


17421..17684
DNA (264bp) protein (88aa)
30S ribosomal protein S17 n=1 Tax=Blautia sp. CAG:37 RepID=R7JN74_9FIRM
30S ribosomal protein S17; K02961 small subunit ribosomal protein S17
Tax=RBG_13_OP11_Shapirobacteria_44_7_curated
RBG_13_scaffold_2594_curated_22
RBG_13_OP11_Shapirobacteria_44_7_curated, Shapirobacteria, Microgenomates, Bacteria

Not on your lists


17693..18061
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=1 Tax=uncultured bacterium RepID=K2BSJ4_9BACT
50S ribosomal protein L14; K02874 large subunit ribosomal protein L14
Tax=RBG_13_OP11_Shapirobacteria_44_7_curated
RBG_13_scaffold_2594_curated_23
RBG_13_OP11_Shapirobacteria_44_7_curated, Shapirobacteria, Microgenomates, Bacteria

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18068..18394
DNA (327bp) protein (109aa)
50S ribosomal protein L24 n=1 Tax=Fervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1) RepID=RL24_FERNB
rplX; 50S ribosomal protein L24; K02895 large subunit ribosomal protein L24
Tax=RBG_13_OP11_Shapirobacteria_44_7_curated
RBG_13_scaffold_2594_curated_24
RBG_13_OP11_Shapirobacteria_44_7_curated, Shapirobacteria, Microgenomates, Bacteria

Not on your lists


19313..19852
DNA (540bp) protein (180aa)
50S ribosomal protein L6 n=1 Tax=Thermoanaerobacterium saccharolyticum (strain DSM 8691 / JW/SL-YS485) RepID=I3VU47_THESW
50S ribosomal protein L6
Tax=RBG_13_OP11_Shapirobacteria_44_7_curated
RBG_13_scaffold_2594_curated_25
RBG_13_OP11_Shapirobacteria_44_7_curated, Shapirobacteria, Microgenomates, Bacteria

Not on your lists


19856..20203
DNA (348bp) protein (116aa)
50S ribosomal protein L18 n=1 Tax=Fischerella muscicola RepID=UPI0002D7CADA
50S ribosomal protein L18
Tax=RBG_13_OP11_Shapirobacteria_44_7_curated
RBG_13_scaffold_2594_curated_26
RBG_13_OP11_Shapirobacteria_44_7_curated, Shapirobacteria, Microgenomates, Bacteria

Not on your lists


20212..20664
DNA (453bp) protein (151aa)
rpsE; 30S ribosomal protein S5; K02988 small subunit ribosomal protein S5 id=15191842 bin=GWC1_OP11_49_16_COMPLETE species=ACD57 genus=ACD57 taxon_order=ACD57 taxon_class=ACD57 phylum=OP11 tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates)
ribosomal protein S5, bacterial/organelle type
Tax=RBG_13_OP11_Shapirobacteria_44_7_curated
RBG_13_scaffold_2594_curated_27
RBG_13_OP11_Shapirobacteria_44_7_curated, Shapirobacteria, Microgenomates, Bacteria

Not on your lists


20666..21088
DNA (423bp) protein (141aa)
hypothetical protein n=1 Tax=Microgenomates bacterium SCGC AAA255-J07 RepID=UPI000363F8E0
rplO; 50S ribosomal protein L15; K02876 large subunit ribosomal protein L15
Tax=RBG_13_OP11_Shapirobacteria_44_7_curated
RBG_13_scaffold_2594_curated_28
RBG_13_OP11_Shapirobacteria_44_7_curated, Shapirobacteria, Microgenomates, Bacteria

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comp(21471..21725)
DNA (255bp) protein (85aa)
Tax=RBG_13_OP11_Shapirobacteria_44_7_curated
RBG_13_scaffold_2594_curated_29
RBG_13_OP11_Shapirobacteria_44_7_curated, Shapirobacteria, Microgenomates, Bacteria

Not on your lists

23077..23397
DNA (321bp) protein (107aa)
Tax=RBG_13_OP11_Shapirobacteria_44_7_curated
RBG_13_scaffold_2594_curated_30
RBG_13_OP11_Shapirobacteria_44_7_curated, Shapirobacteria, Microgenomates, Bacteria

Not on your lists

23394..23597
DNA (204bp) protein (68aa)
Translation initiation factor IF-1 id=2193072 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
infA; translation initiation factor IF-1
Tax=RBG_13_OP11_Shapirobacteria_44_7_curated
Displaying items 1-30 of 38 in total

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