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RBG_13_OP3_44_8_RBG_13_scaffold_2476

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_13_OP3_44_8_RBG_13_scaffold_2476_1
unknown

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6..359
DNA (354bp) protein (118aa)

This feature has no annotations

RBG_13_OP3_44_8_RBG_13_scaffold_2476_2
unknown

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450..770
DNA (321bp) protein (107aa)
Thioredoxin id=4541624 bin=GWC2_OP3_44_8 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
thioredoxin
RBG_13_OP3_44_8_RBG_13_scaffold_2476_3
unknown

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1430..1966
DNA (537bp) protein (179aa)
DRTGG domain protein id=3597776 bin=GWF2_OP3_43_52 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
DRTGG domain-containing protein; K06873
RBG_13_OP3_44_8_RBG_13_scaffold_2476_4
unknown

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2023..2952
DNA (930bp) protein (310aa)
eutD; phosphotransacetylase; K00625 phosphate acetyltransferase [EC:2.3.1.8]
Phosphate acetyltransferase id=3597778 bin=GWF2_OP3_43_52 species=Tepidanaerobacter acetatoxydans genus=Tepidanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
RBG_13_OP3_44_8_RBG_13_scaffold_2476_5
unknown

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2955..4007
DNA (1053bp) protein (351aa)
acetate kinase (EC:2.7.2.1); K00925 acetate kinase [EC:2.7.2.1]
Acetate kinase id=4513895 bin=GWC2_OP3_44_8 species=unknown genus=Thermoanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
RBG_13_OP3_44_8_RBG_13_scaffold_2476_6
unknown

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4128..4478
DNA (351bp) protein (117aa)
Aspartate 1-decarboxylase id=4113714 bin=GWF2_OP3_43_52 species=unknown genus=Thermoanaerobacterium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
L-aspartate-alpha-decarboxylase
RBG_13_OP3_44_8_RBG_13_scaffold_2476_7
unknown

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4453..5001
DNA (549bp) protein (183aa)
peptide deformylase (EC:3.5.1.88); K01462 peptide deformylase [EC:3.5.1.88]
Peptide deformylase id=4113713 bin=GWF2_OP3_43_52 species=uncultured microorganism genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
RBG_13_OP3_44_8_RBG_13_scaffold_2476_8
Desulfobacca acetoxidans, Desulfobacca, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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4952..5149
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NCA6_DESAR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB08970.1}; TaxID=880072 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Desulfobacca.;" source="Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2).;"
RBG_13_OP3_44_8_RBG_13_scaffold_2476_9
Caldicellulosiruptor hydrothermalis, Caldicellulosiruptor, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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5146..6042
DNA (897bp) protein (299aa)
lipoic acid synthetase (EC:2.8.1.8); K03644 lipoic acid synthetase [EC:2.8.1.8]
Lipoyl synthase {ECO:0000256|HAMAP-Rule:MF_00206}; EC=2.8.1.8 {ECO:0000256|HAMAP-Rule:MF_00206};; Lip-syn {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoate synthase {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoic acid synthase {ECO:0000256|HAMAP-Rule:MF_00206}; Sulfur insertion protein LipA {ECO:0000256|HAMAP-Rule:MF_00206}; TaxID=632292 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Caldicellulosiruptor.;" source="Caldicellulosiruptor hydrothermalis
Lipoyl synthase n=1 Tax=Caldicellulosiruptor hydrothermalis (strain DSM 18901 / VKM B-2411 / 108) RepID=E4QDY7_CALH1
RBG_13_OP3_44_8_RBG_13_scaffold_2476_10
unknown

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6151..7062
DNA (912bp) protein (304aa)
thioredoxin reductase; K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9]
Thioredoxin reductase id=4113711 bin=GWF2_OP3_43_52 species=Thermodesulfatator indicus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
RBG_13_OP3_44_8_RBG_13_scaffold_2476_11
unknown

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7064..8854
DNA (1791bp) protein (597aa)
phosphoenolpyruvate carboxykinase (EC:4.1.1.32); K01596 phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
Phosphoenolpyruvate carboxykinase [GTP] id=4113710 bin=GWF2_OP3_43_52 species=unknown genus=Caldicellulosiruptor taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
RBG_13_OP3_44_8_RBG_13_scaffold_2476_12
unknown

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8851..9756
DNA (906bp) protein (302aa)
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6); K01923 phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
Phosphoribosylaminoimidazole-succinocarboxamide synthase id=1711785 bin=GWB2_CP_45_9 species=Thermodesulfatator indicus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
RBG_13_OP3_44_8_RBG_13_scaffold_2476_13
unknown

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9743..10705
DNA (963bp) protein (321aa)
Uncharacterized protein id=2564857 bin=GWC2_OP3_44_8 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
membrane protein
RBG_13_OP3_44_8_RBG_13_scaffold_2476_14
unknown

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10674..11147
DNA (474bp) protein (158aa)
Putative uncharacterized protein id=1711787 bin=GWB2_CP_45_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
RBG_13_OP3_44_8_RBG_13_scaffold_2476_15
unknown

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11135..11920
DNA (786bp) protein (262aa)
Putative uncharacterized protein id=4113664 bin=GWF2_OP3_43_52 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
beta-lactamase domain-containing protein
RBG_13_OP3_44_8_RBG_13_scaffold_2476_16
unknown

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11997..12674
DNA (678bp) protein (226aa)
Mechanosensitive ion channel protein id=4223251 bin=GWF2_OP3_43_52 species=Azotobacter vinelandii genus=Azotobacter taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
TM helix protein
RBG_13_OP3_44_8_RBG_13_scaffold_2476_17
unknown

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comp(13256..13405)
DNA (150bp) protein (50aa)

This feature has no annotations

RBG_13_OP3_44_8_RBG_13_scaffold_2476_18
unknown

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13533..13724
DNA (192bp) protein (64aa)

This feature has no annotations

Displaying 18 items

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