ggKbase home page

RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_6370

Search features with annotation key words

Displaying 27 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_6370_1
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(181..1920)
DNA (1740bp) protein (580aa)
PAS/PAC sensor hybrid histidine kinase n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RHV8_DESPD
PAS/PAC sensor hybrid histidine kinase Tax=RBG_16_Desulfobacca_60_12_curated
PAS/PAC sensor hybrid histidine kinase
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_6370_2
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2818..7239)
DNA (4422bp) protein (1474aa)
glutamate synthase (EC:1.4.1.13) Tax=RBG_16_Desulfobacca_60_12_curated
glutamate synthase (EC:1.4.1.13)
Glutamate synthase (NADPH) n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NGT0_DESAR
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_6370_3
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7634..8473
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C628_DESTA
hypothetical protein Tax=RBG_16_Desulfobacca_60_12_curated
hypothetical protein
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_6370_4
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8809..9732
DNA (924bp) protein (308aa)
ATP-binding protein; K04562 flagellar biosynthesis protein FlhG Tax=RBG_16_Desulfobacca_60_12_curated
ATP-binding protein; K04562 flagellar biosynthesis protein FlhG id=15192737 bin=GWC2_NOV_55_46 species=Desulfurivibrio alkaliphilus genus=Desulfurivibrio taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_NOV_55_46 organism_group=Proteobacteria
ATP-binding protein
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_6370_5
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9729..10346
DNA (618bp) protein (206aa)
Tax=RBG_16_Desulfobacca_60_12_curated
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_6370_6
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10426..12090)
DNA (1665bp) protein (555aa)
PAS/PAC sensor signal transduction histidine kinase Tax=RBG_16_Desulfobacca_60_12_curated
PAS sensor protein id=3838275 bin=GWA2_Ignavibacteriae_54_16_partial species=Holophaga foetida genus=Holophaga taxon_order=Holophagales taxon_class=Holophagae phylum=Acidobacteria tax=GWA2_Ignavibacteriae_54_16_partial organism_group=Ignavibacteria
PAS/PAC sensor signal transduction histidine kinase
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_6370_7
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12499..13827)
DNA (1329bp) protein (443aa)
PAS domain-containing sensor histidine kinase Tax=RBG_16_Desulfobacca_60_12_curated
PAS sensor protein id=3838275 bin=GWA2_Ignavibacteriae_54_16_partial species=Holophaga foetida genus=Holophaga taxon_order=Holophagales taxon_class=Holophagae phylum=Acidobacteria tax=GWA2_Ignavibacteriae_54_16_partial organism_group=Ignavibacteria
sensor histidine kinase, PAS domain-containing
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_6370_8
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14148..14795)
DNA (648bp) protein (216aa)
LuxR family transcriptional regulator Tax=RBG_16_Desulfobacca_60_12_curated
Two-component response regulator id=3070217 bin=GWF2_Planctomycetes_50_10 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Planctomycetes_50_10 organism_group=Planctomycetes
LuxR family transcriptional regulator
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_6370_9
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14905..15342)
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Desulfotomaculum hydrothermale Lam5 = DSM 18033 RepID=K8E9N0_9FIRM
Extracellular nuclease Tax=RBG_16_Desulfobacca_60_12_curated
Extracellular nuclease
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_6370_10
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15859..16434)
DNA (576bp) protein (192aa)
Putative PAS/PAC sensor protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21T03_RHOFD
putative PAS/PAC sensor protein Tax=RBG_16_Desulfobacca_60_12_curated
putative PAS/PAC sensor protein
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_6370_11
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16476..17054)
DNA (579bp) protein (193aa)
Tax=RBG_16_Desulfobacca_60_12_curated
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_6370_12
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18101..18745
DNA (645bp) protein (215aa)
Methyltransferase type 11 n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NGK9_DESAR
methyltransferase type 11 Tax=RBG_16_Desulfobacca_60_12_curated
methyltransferase type 11
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_6370_13
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18748..19392)
DNA (645bp) protein (215aa)
Putative membrane protein n=1 Tax=delta proteobacterium NaphS2 RepID=D8F300_9DELT
hypothetical protein Tax=RBG_16_Desulfobacca_60_12_curated
hypothetical protein
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_6370_14
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19532..19786)
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Desulfococcus multivorans DSM 2059 RepID=S7UXC4_DESML
hypothetical protein Tax=RBG_16_Desulfobacca_60_12_curated
hypothetical protein
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_6370_15
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20384..20488
DNA (105bp) protein (35aa)
Tax=RBG_16_Desulfobacca_60_12_curated
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_6370_16
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20739..20996)
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Desulfovibrio alkalitolerans DSM 16529 RepID=S7UQ13_9DELT
hypothetical protein Tax=RBG_16_Desulfobacca_60_12_curated
hypothetical protein
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_6370_17
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21081..22418)
DNA (1338bp) protein (446aa)
thiol:disulfide interchange protein Tax=RBG_16_Desulfobacca_60_12_curated
Thiol:disulfide interchange protein id=1714453 bin=GWB2_Desulfobacterales_56_26 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
thiol:disulfide interchange protein
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_6370_18
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22458..22817)
DNA (360bp) protein (120aa)
putative sulfurtransferase Tax=RBG_16_Desulfobacca_60_12_curated
Putative sulfurtransferase id=1714452 bin=GWB2_Desulfobacterales_56_26 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
putative sulfurtransferase
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_6370_19
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22836..23072)
DNA (237bp) protein (79aa)
hypothetical protein Tax=RBG_16_Desulfobacca_60_12_curated
Putative uncharacterized protein id=1714451 bin=GWB2_Desulfobacterales_56_26 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
hypothetical protein
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_6370_20
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23112..23288)
DNA (177bp) protein (59aa)
Tax=RBG_16_Desulfobacca_60_12_curated
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_6370_21
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23311..23646)
DNA (336bp) protein (112aa)
ArsR family transcriptional regulator n=1 Tax=uncultured bacterium RepID=K1YU53_9BACT
putative transcriptional regulator Tax=RBG_16_Desulfobacca_60_12_curated
putative transcriptional regulator
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_6370_22
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24311..24490
DNA (180bp) protein (60aa)
Tax=RBG_16_Desulfobacca_60_12_curated
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_6370_23
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24957..25595)
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NID0_DESAR
hypothetical protein Tax=RBG_16_Desulfobacca_60_12_curated
hypothetical protein
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_6370_24
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25696..26286)
DNA (591bp) protein (197aa)
Putative uncharacterized protein n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NJI9_ROSCS
hypothetical protein Tax=RBG_16_Desulfobacca_60_12_curated
hypothetical protein
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_6370_25
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26902..27480
DNA (579bp) protein (193aa)
phospho-2-dehydro-3-deoxyheptonate aldolase (EC:4.1.2.13); K01623 fructose-bisphosphate aldolase, class I [EC:4.1.2.13] Tax=RBG_16_Desulfobacca_60_12_curated
phospho-2-dehydro-3-deoxyheptonate aldolase (EC:4.1.2.13)
2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NGC1_DESAR
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_6370_26
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27495..28487
DNA (993bp) protein (331aa)
3-dehydroquinate synthase; K11646 dehydroquinate synthase II [EC:1.4.1.-] Tax=RBG_16_Desulfobacca_60_12_curated
3-dehydroquinate synthase n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NGC0_DESAR
3-dehydroquinate synthase
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_6370_27
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28667..29440
DNA (774bp) protein (258aa)
prephenate dehydratase; K14170 chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51] Tax=RBG_16_Desulfobacca_60_12_curated
Prephenate dehydratase n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NGB9_DESAR
prephenate dehydratase
Displaying 27 items

View Taxonomy