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RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_7938

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Displaying items 1-30 of 38 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_7938_1
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(116..430)
DNA (315bp) protein (105aa)
Tax=RBG_16_Desulfobacca_60_12_curated
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_7938_2
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1453..2919
DNA (1467bp) protein (489aa)
Uncharacterized protein n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NIN1_DESAR
hypothetical protein Tax=RBG_16_Desulfobacca_60_12_curated
hypothetical protein
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_7938_3
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3023..3481
DNA (459bp) protein (153aa)
S23 ribosomal protein Tax=RBG_16_Desulfobacca_60_12_curated
S23 ribosomal protein id=718769 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
S23 ribosomal protein
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_7938_4
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3481..4623
DNA (1143bp) protein (381aa)
Uncharacterized protein n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NIM9_DESAR
hypothetical protein Tax=RBG_16_Desulfobacca_60_12_curated
hypothetical protein
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_7938_5
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4824..5765)
DNA (942bp) protein (314aa)
seryl-tRNA synthetase (EC:6.1.1.11); K01875 seryl-tRNA synthetase [EC:6.1.1.11] Tax=RBG_16_Desulfobacca_60_12_curated
seryl-tRNA synthetase (EC:6.1.1.11)
Serine--tRNA ligase n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NIM8_DESAR
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_7938_6
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5958..6110
DNA (153bp) protein (51aa)
Tax=RBG_16_Desulfobacca_60_12_curated
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_7938_7
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6776..7534)
DNA (759bp) protein (253aa)
chorismate mutase (EC:5.4.99.5); K04517 prephenate dehydrogenase [EC:1.3.1.12] Tax=RBG_16_Desulfobacca_60_12_curated
chorismate mutase (EC:5.4.99.5)
Chorismate mutase n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NIM7_DESAR
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_7938_8
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7704..8564)
DNA (861bp) protein (287aa)
chorismate synthase (EC:4.2.3.5); K01736 chorismate synthase [EC:4.2.3.5] Tax=RBG_16_Desulfobacca_60_12_curated
chorismate synthase (EC:4.2.3.5)
Chorismate synthase n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NIM6_DESAR
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_7938_9
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8739..9320)
DNA (582bp) protein (194aa)
shikimate kinase (EC:2.7.1.71); K00891 shikimate kinase [EC:2.7.1.71] Tax=RBG_16_Desulfobacca_60_12_curated
shikimate kinase (EC:2.7.1.71)
Shikimate kinase n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NIM5_DESAR
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_7938_10
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9695..9967)
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON) RepID=F4A342_MAHA5
hypothetical protein Tax=RBG_16_Desulfobacca_60_12_curated
hypothetical protein
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_7938_11
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10241..11083)
DNA (843bp) protein (281aa)
Beta-lactamase domain protein n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NIM4_DESAR
beta-lactamase domain-containing protein Tax=RBG_16_Desulfobacca_60_12_curated
beta-lactamase domain-containing protein
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_7938_12
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11161..12219)
DNA (1059bp) protein (353aa)
Putative pyruvate format-lyase activating enzyme n=1 Tax=Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB) RepID=K4LGW2_THEPS
pyruvate format-lyase activating enzyme Tax=RBG_16_Desulfobacca_60_12_curated
pyruvate format-lyase activating enzyme
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_7938_13
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12212..13024)
DNA (813bp) protein (271aa)
Purine or other phosphorylase family 1 n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NIM3_DESAR
purine or other phosphorylase 1 Tax=RBG_16_Desulfobacca_60_12_curated
purine or other phosphorylase 1
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_7938_14
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13021..13632)
DNA (612bp) protein (204aa)
SNARE associated Golgi protein-like protein n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NIN9_DESAR
hypothetical protein Tax=RBG_16_Desulfobacca_60_12_curated
hypothetical protein
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_7938_15
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13619..15064)
DNA (1446bp) protein (482aa)
nicotinate phosphoribosyltransferase; K00763 nicotinate phosphoribosyltransferase [EC:2.4.2.11] Tax=RBG_16_Desulfobacca_60_12_curated
Nicotinate phosphoribosyltransferase n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NIP0_DESAR
nicotinate phosphoribosyltransferase
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_7938_16
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15207..15347)
DNA (141bp) protein (47aa)
Tax=RBG_16_Desulfobacca_60_12_curated
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_7938_17
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15344..15895)
DNA (552bp) protein (184aa)
Transposase n=1 Tax=Pseudomonas pseudoalcaligenes KF707 RepID=L8MKA8_PSEPS
hypothetical protein; K07491 putative transposase Tax=RBG_16_Desulfobacca_60_12_curated
hypothetical protein
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_7938_18
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(16011..16823)
DNA (813bp) protein (271aa)
O-sialoglycoprotein endopeptidase (EC:3.4.24.57); K01409 O-sialoglycoprotein endopeptidase [EC:3.4.24.57] Tax=RBG_16_Desulfobacca_60_12_curated
O-sialoglycoprotein endopeptidase (EC:3.4.24.57)
tRNA N6-adenosine threonylcarbamoyltransferase n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NFQ4_DESAR
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_7938_19
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17123..17701)
DNA (579bp) protein (193aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002F24AC7
EEPD1; endonuclease/exonuclease/phosphatase family domain containing 1 Tax=RBG_16_Desulfobacca_60_12_curated
competence protein ComEA helix-hairpin-helix repeat-containing protein
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_7938_20
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18398..18757)
DNA (360bp) protein (120aa)
2-isopropylmalate synthase (EC:2.3.1.182); K01649 2-isopropylmalate synthase [EC:2.3.3.13] Tax=RBG_16_Desulfobacca_60_12_curated
2-isopropylmalate synthase (EC:2.3.1.182)
2-isopropylmalate synthase/homocitrate synthase family protein n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NFN6_DESAR
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_7938_21
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19683..19874
DNA (192bp) protein (64aa)
Tax=RBG_16_Desulfobacca_60_12_curated
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_7938_22
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20138..21370)
DNA (1233bp) protein (411aa)
aspartate kinase (EC:2.7.2.4); K00928 aspartate kinase [EC:2.7.2.4] Tax=RBG_16_Desulfobacca_60_12_curated
aspartate kinase (EC:2.7.2.4)
Aspartokinase n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NFN7_DESAR
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_7938_23
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21539..22438
DNA (900bp) protein (300aa)
bifunctional protein folD (EC:1.5.1.5 3.5.4.9); K01491 methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] Tax=RBG_16_Desulfobacca_60_12_cura
bifunctional protein folD (EC:1.5.1.5 3.5.4.9)
Bifunctional protein FolD n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NFI3_DESAR
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_7938_24
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22600..22827)
DNA (228bp) protein (76aa)
hisIE; bifunctional protein hisIE; K11755 phosphoribosyl-ATP pyrophosphohydrolase / phosphoribosyl-AMP cyclohydrolase [EC:3.6.1.31 3.5.4.19] Tax=RBG_16_Desulfobacca_60_12_curated
hisIE; bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase (EC:3.5.4.19 3.6.1.31)
Phosphoribosyl-AMP cyclohydrolase n=1 Tax=Acinetobacter pittii ANC 3678 RepID=N9GAE7_ACIPI
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_7938_25
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23266..23688
DNA (423bp) protein (141aa)
id=14626680 Tax=RBG_16_Desulfobacca_60_12_curated
id=14626680 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_7938_26
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23781..24308)
DNA (528bp) protein (176aa)
Appr-1-p processing domain protein n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NC32_DESAR
appr-1-p histone processing protein Tax=RBG_16_Desulfobacca_60_12_curated
Appr-1-p processing domain-containing protein
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_7938_27
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24497..24955)
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C771_DESTA
hypothetical protein Tax=RBG_16_Desulfobacca_60_12_curated
hypothetical protein
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_7938_28
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24971..25072)
DNA (102bp) protein (34aa)
Tax=RBG_16_Desulfobacca_60_12_curated
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_7938_29
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25303..25785)
DNA (483bp) protein (161aa)
UspA domain-containing protein Tax=RBG_16_Desulfobacca_60_12_curated
UspA family domain-containing protein id=3444017 bin=GWC2_Nitrospirae-rel_56_14 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
UspA domain-containing protein
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_7938_30
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26121..27197
DNA (1077bp) protein (359aa)
Diguanylate cyclase with GAF sensor n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NID6_DESAR
GAF sensor-containing diguanylate cyclase Tax=RBG_16_Desulfobacca_60_12_curated
GAF sensor-containing diguanylate cyclase
Displaying items 1-30 of 38 in total

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