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RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_17758

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Displaying 22 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_17758_1
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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1..429
DNA (429bp) protein (143aa)
30S ribosomal protein S4 n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=RS4_SYNAS
30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 Tax=RBG_16_Desulfobacca_60_12_curated
30S ribosomal protein S4
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_17758_2
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

563..1576
DNA (1014bp) protein (338aa)
DNA-directed RNA polymerase subunit alpha; K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] Tax=RBG_16_Desulfobacca_60_12_curated
DNA-directed RNA polymerase subunit alpha n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NJB1_DESAR
DNA-directed RNA polymerase subunit alpha
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_17758_3
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


1573..1974
DNA (402bp) protein (134aa)
50S ribosomal protein L17 n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NJB0_DESAR
50S ribosomal protein L17; K02879 large subunit ribosomal protein L17 Tax=RBG_16_Desulfobacca_60_12_curated
50S ribosomal protein L17
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_17758_4
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2336..2635)
DNA (300bp) protein (100aa)
Tax=RBG_16_Desulfobacca_60_12_curated
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_17758_5
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2857..3240
DNA (384bp) protein (128aa)
NLP/P60 protein n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NHD7_DESAR
NLP/P60 protein Tax=RBG_16_Desulfobacca_60_12_curated
NLP/P60 protein
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_17758_6
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3513..4481
DNA (969bp) protein (323aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium COE1 RepID=R9KV84_9FIRM
Uncharacterized protein Tax=RBG_16_Desulfobacca_60_12_curated
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_17758_7
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4478..4825
DNA (348bp) protein (116aa)
Tax=RBG_16_Desulfobacca_60_12_curated
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_17758_8
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5022..5393)
DNA (372bp) protein (124aa)
Tax=RBG_16_Desulfobacca_60_12_curated
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_17758_9
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5527..5868)
DNA (342bp) protein (114aa)
Cytochrome b561 family protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47YK1_COLP3
cytochrome b561 family protein Tax=RBG_16_Desulfobacca_60_12_curated
cytochrome b561 family protein
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_17758_10
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5808..6086)
DNA (279bp) protein (93aa)
Tax=RBG_16_Desulfobacca_60_12_curated
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_17758_11
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6207..7199)
DNA (993bp) protein (331aa)
beta-lactamase Tax=RBG_16_Desulfobacca_60_12_curated
beta-lactamase id=14623647 bin=bin5_DeltaP species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
beta-lactamase
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_17758_12
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7424..7804)
DNA (381bp) protein (127aa)
Tax=RBG_16_Desulfobacca_60_12_curated
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_17758_13
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8082..9227
DNA (1146bp) protein (382aa)
serine--glyoxylate transaminase (EC:2.6.1.45) Tax=RBG_16_Desulfobacca_60_12_curated
serine--glyoxylate transaminase (EC:2.6.1.45)
Serine--glyoxylate transaminase n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NCK0_DESAR
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_17758_14
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9224..10807
DNA (1584bp) protein (528aa)
D-3-phosphoglycerate dehydrogenase (EC:1.1.1.95); K00058 D-3-phosphoglycerate dehydrogenase [EC:1.1.1.95] Tax=RBG_16_Desulfobacca_60_12_curated
D-3-phosphoglycerate dehydrogenase (EC:1.1.1.95)
D-3-phosphoglycerate dehydrogenase n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NCK1_DESAR
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_17758_15
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10831..11271
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NCK2_DESAR
hypothetical protein Tax=RBG_16_Desulfobacca_60_12_curated
hypothetical protein
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_17758_16
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11295..12734
DNA (1440bp) protein (480aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC:2.7.1.148); K00919 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] Tax=RBG_16_Desulfobacca_60_12_curated
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC:2.7.1.148)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NCK3_DESAR
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_17758_17
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13278..13892
DNA (615bp) protein (205aa)
peptidyl-tRNA hydrolase (EC:3.1.1.29); K01056 peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] Tax=RBG_16_Desulfobacca_60_12_curated
peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NCK5_DESAR
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_17758_18
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13998..14483
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NCK6_DESAR
hypothetical protein Tax=RBG_16_Desulfobacca_60_12_curated
hypothetical protein
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_17758_19
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15053..15727
DNA (675bp) protein (225aa)
Sigma 54 interacting domain protein n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NGA2_DESAR
Fis family transcriptional regulator Tax=RBG_16_Desulfobacca_60_12_curated
Fis family transcriptional regulator
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_17758_20
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16230..16424)
DNA (195bp) protein (65aa)
Putative regulatory protein FmdB n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NEH2_DESAR
regulatory protein FmdB Tax=RBG_16_Desulfobacca_60_12_curated
regulatory protein FmdB
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_17758_21
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16918..17178
DNA (261bp) protein (87aa)
Tax=RBG_16_Desulfobacca_60_12_curated
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_17758_22
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17720..18589)
DNA (870bp) protein (290aa)
NAD(P)H-quinone oxidoreductase subunit 2 (EC:1.6.99.5); K00343 NADH-quinone oxidoreductase subunit N [EC:1.6.5.3] Tax=RBG_16_Desulfobacca_60_12_curated
NAD(P)H-quinone oxidoreductase subunit 2 (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit N n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NHF5_DESAR
Displaying 22 items

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