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RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_6045

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Displaying items 1-30 of 36 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_6045_1
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..671
DNA (669bp) protein (223aa)
Histidinol-phosphate phosphatase family protein n=1 Tax=Leptospirillum ferriphilum (strain ML-04) RepID=J9ZBZ2_LEPFM
histidinol-phosphate phosphatase family protein Tax=RBG_16_Desulfobacca_60_12_curated
histidinol-phosphate phosphatase family protein
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_6045_2
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1141..2028
DNA (888bp) protein (296aa)
Short-chain dehydrogenase/reductase SDR family protein n=1 Tax=Clostridium sp. CAG:967 RepID=R5K950_9CLOT
Radical SAM domain-containing protein Tax=RBG_16_Desulfobacca_60_12_curated
Radical SAM domain-containing protein
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_6045_3
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2476..3192
DNA (717bp) protein (239aa)
Methyltransferase type 11 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TDA8_NIAKG
type 11 methyltransferase Tax=RBG_16_Desulfobacca_60_12_curated
type 11 methyltransferase
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_6045_4
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3729..4262
DNA (534bp) protein (178aa)
dTDP-4-dehydrorhamnose 3,5-epimerase; K01790 dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] Tax=RBG_16_Desulfobacca_60_12_curated
dTDP-4-dehydrorhamnose 3,5-epimerase id=1860196 bin=GWE2_RBX1_39_32 species=unknown genus=Thermodesulfobacterium taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
dTDP-4-dehydrorhamnose 3,5-epimerase
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_6045_5
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4429..5349
DNA (921bp) protein (307aa)
dTDP-4-dehydrorhamnose reductase; K00067 dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] Tax=RBG_16_Desulfobacca_60_12_curated
dTDP-4-dehydrorhamnose reductase n=1 Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D555_METSW id=5103431 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
dTDP-4-dehydrorhamnose reductase
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_6045_6
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5796..6437
DNA (642bp) protein (214aa)
Putative uncharacterized protein n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HWI4_9BACT
hypothetical protein Tax=RBG_16_Desulfobacca_60_12_curated
hypothetical protein
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_6045_7
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6640..7683
DNA (1044bp) protein (348aa)
Glycosyl transferase n=1 Tax=Thermococcus litoralis DSM 5473 RepID=H3ZLL2_THELI
glycosyl transferase Tax=RBG_16_Desulfobacca_60_12_curated
glycosyl transferase
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_6045_8
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7805..9055
DNA (1251bp) protein (417aa)
group glycosyltransferase Tax=RBG_16_Desulfobacca_60_12_curated
Glycosyltransferase id=2253563 bin=GWB2_Proteobacteria_55_19 species=Polaromonas sp. CF318 genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
glycosyltransferase
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_6045_9
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9200..10102
DNA (903bp) protein (301aa)
dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133) Tax=RBG_16_Desulfobacca_60_12_curated
dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133)
dTDP-4-dehydrorhamnose reductase n=1 Tax=Desulfosporosinus acidiphilus (strain DSM 22704 / JCM 16185 / SJ4) RepID=I4D1K1_DESAJ
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_6045_10
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10123..11175
DNA (1053bp) protein (351aa)
capE; capsular polysaccharide synthesis enzyme Cap8E (EC:5.1.3.2) Tax=RBG_16_Desulfobacca_60_12_curated
UDP-N-acetylglucosamine 4,6-dehydratase (inverting) (EC:4.2.1.115)
Polysaccharide biosynthesis protein CapD id=2171146 bin=GWB2_Nitrospirae_rel_47_37 species=Nitrococcus mobilis genus=Nitrococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_6045_11
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11208..12338
DNA (1131bp) protein (377aa)
UDP-N-acetylglucosamine 2-epimerase (EC:5.1.3.14); K01791 UDP-N-acetylglucosamine 2-epimerase [EC:5.1.3.14] Tax=RBG_16_Desulfobacca_60_12_curated
UDP-N-acetylglucosamine 2-epimerase (EC:5.1.3.14)
UDP-N-acetylglucosamine 2-epimerase id=2171147 bin=GWB2_Nitrospirae_rel_47_37 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_6045_12
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12342..13724
DNA (1383bp) protein (461aa)
Putative glycosyltransferase n=1 Tax=planctomycete KSU-1 RepID=I3IJ45_9PLAN
exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase Tax=RBG_16_Desulfobacca_60_12_curated
exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_6045_13
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14154..15503
DNA (1350bp) protein (450aa)
Tax=RBG_16_Desulfobacca_60_12_curated
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_6045_14
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15602..16807
DNA (1206bp) protein (402aa)
hypothetical protein n=1 Tax=Pseudanabaena sp. PCC 6802 RepID=UPI00038025D4
group 1 glycosyl transferase Tax=RBG_16_Desulfobacca_60_12_curated
group 1 glycosyl transferase
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_6045_15
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16838..17860
DNA (1023bp) protein (341aa)
hypothetical protein n=1 Tax=Janthinobacterium sp. CG3 RepID=UPI00036B85D4
hypothetical protein Tax=RBG_16_Desulfobacca_60_12_curated
conserved protein of unknown function
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_6045_16
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18279..18548)
DNA (270bp) protein (90aa)
Tax=RBG_16_Desulfobacca_60_12_curated
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_6045_17
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19287..20087
DNA (801bp) protein (267aa)
Methyltransferase type 12 n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PUC8_CHIPD
type 12 methyltransferase Tax=RBG_16_Desulfobacca_60_12_curated
type 12 methyltransferase
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_6045_18
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20208..21035
DNA (828bp) protein (276aa)
Methyltransferase, FkbM family n=1 Tax=Beggiatoa alba B18LD RepID=I3CHN9_9GAMM
methyltransferase FkbM family Tax=RBG_16_Desulfobacca_60_12_curated
methyltransferase FkbM family
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_6045_19
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21452..22909
DNA (1458bp) protein (486aa)
hypothetical protein n=1 Tax=candidate division NC10 bacterium UW 659-1-D11 RepID=UPI00037EDB42
putative flippase Tax=RBG_16_Desulfobacca_60_12_curated
putative flippase
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_6045_20
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22986..24134
DNA (1149bp) protein (383aa)
Glycosyl transferase group 1 n=1 Tax=Desulfohalobium retbaense (strain DSM 5692) RepID=C8X053_DESRD
group 1 glycosyl transferase Tax=RBG_16_Desulfobacca_60_12_curated
group 1 glycosyl transferase
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_6045_21
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24021..24323)
DNA (303bp) protein (101aa)
Tax=RBG_16_Desulfobacca_60_12_curated
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_6045_22
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24798..25229
DNA (432bp) protein (144aa)
GDP-mannose 4,6-dehydratase (EC:4.2.1.47); K01711 GDPmannose 4,6-dehydratase [EC:4.2.1.47] Tax=RBG_16_Desulfobacca_60_12_curated
GDP-mannose 4,6-dehydratase (EC:4.2.1.47)
GDP-D-mannose dehydratase id=3523513 bin=GWF2_Melainabacteria_37_15 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=GWF2_Melainabacteria_37_15 organism_group=Melainabacteria
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_6045_23
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25311..26540
DNA (1230bp) protein (410aa)
Glycosyltransferase n=1 Tax=Paenibacillus sp. P22 RepID=T2LYL3_9BACL
rfaG; glycosyltransferase Tax=RBG_16_Desulfobacca_60_12_curated
rfaG; glycosyltransferase
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_6045_24
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26537..27418
DNA (882bp) protein (294aa)
glycosyl transferase family protein (EC:2.4.1.-) Tax=RBG_16_Desulfobacca_60_12_curated
glycosyl transferase family protein (EC:2.4.1.-)
Glycosyl transferase n=1 Tax=Beggiatoa alba B18LD RepID=I3CJR1_9GAMM
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_6045_25
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28553..29752
DNA (1200bp) protein (400aa)
hypothetical protein n=1 Tax=Thermodesulfatator atlanticus RepID=UPI0003B43D0A
hypothetical protein Tax=RBG_16_Desulfobacca_60_12_curated
hypothetical protein
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_6045_26
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29889..31475
DNA (1587bp) protein (529aa)
hypothetical protein n=1 Tax=zeta proteobacterium SCGC AB-133-G06 RepID=UPI000366D136
sugar transferase; K03606 putative colanic acid biosysnthesis UDP-glucose lipid carrier transferase Tax=RBG_16_Desulfobacca_60_12_curated
sugar transferase
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_6045_27
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31644..32585
DNA (942bp) protein (314aa)
NAD-dependent epimerase/dehydratase; K02377 GDP-L-fucose synthase [EC:1.1.1.271] Tax=RBG_16_Desulfobacca_60_12_curated
GDP-L-fucose synthase n=1 Tax=Desulfotomaculum reducens (strain MI-1) RepID=A4J4C2_DESRM
NAD-dependent epimerase/dehydratase
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_6045_28
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33265..34515
DNA (1251bp) protein (417aa)
Adenylate and Guanylate cyclase catalytic domain protein n=1 Tax=delta proteobacterium NaphS2 RepID=D8F5U2_9DELT
family 3 adenylate cyclase Tax=RBG_16_Desulfobacca_60_12_curated
family 3 adenylate cyclase
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_6045_29
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34573..36141)
DNA (1569bp) protein (523aa)
Fe-S oxidoreductase n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C8C3_DESTA
Fe-S oxidoreductase Tax=RBG_16_Desulfobacca_60_12_curated
Fe-S oxidoreductase
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_6045_30
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36193..37854)
DNA (1662bp) protein (554aa)
Putative uncharacterized protein n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LKF9_SYNFM
hypothetical protein Tax=RBG_16_Desulfobacca_60_12_curated
hypothetical protein
Displaying items 1-30 of 36 in total

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