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RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_11662

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Displaying items 1-30 of 33 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_11662_1
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..384
DNA (384bp) protein (128aa)
Cobyrinic acid ac-diamide synthase n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NDB8_DESAR
cobyrinic acid ac-diamide synthase; K03496 chromosome partitioning protein Tax=RBG_16_Desulfobacca_60_12_curated
cobyrinic acid ac-diamide synthase
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_11662_2
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

327..707
DNA (381bp) protein (127aa)
Tax=RBG_16_Desulfobacca_60_12_curated
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_11662_3
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1001..1519)
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NEJ9_DESAR
hypothetical protein Tax=RBG_16_Desulfobacca_60_12_curated
hypothetical protein
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_11662_4
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1742..2599)
DNA (858bp) protein (286aa)
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LFW1_SYNFM
nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase Tax=RBG_16_Desulfobacca_60_12_curated
nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_11662_5
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2834..3031)
DNA (198bp) protein (66aa)
Putative uncharacterized protein n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XQF8_9BACT
Putative uncharacterized protein Tax=RBG_16_Desulfobacca_60_12_curated
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_11662_6
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3320..4567
DNA (1248bp) protein (416aa)
Putative uncharacterized protein n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GEJ2_GEOUR
hypothetical protein Tax=RBG_16_Desulfobacca_60_12_curated
hypothetical protein
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_11662_7
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4724..4933)
DNA (210bp) protein (70aa)
Tax=RBG_16_Desulfobacca_60_12_curated
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_11662_8
RIFOXYC2_FULL_Syntrophobacterales_60_23_curated, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5015..5218)
DNA (204bp) protein (68aa)
Cold-shock DNA-binding domain protein n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NCN0_DESAR
cold-shock DNA-binding domain-containing protein; K03704 cold shock protein (beta-ribbon, CspA family) Tax=RIFOXYC2_FULL_Syntrophobacterales_60_23_curated
cold-shock DNA-binding domain-containing protein
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_11662_9
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5554..7620)
DNA (2067bp) protein (689aa)
Multi-sensor signal transduction histidine kinase n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2ND66_DESAR
multi-sensor signal transduction histidine kinase Tax=RBG_16_Desulfobacca_60_12_curated
multi-sensor signal transduction histidine kinase
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_11662_10
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8211..9170)
DNA (960bp) protein (320aa)
Putative uncharacterized protein n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GEJ3_GEOUR
hypothetical protein Tax=RBG_16_Desulfobacca_60_12_curated
hypothetical protein
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_11662_11
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9263..10849)
DNA (1587bp) protein (529aa)
Multidrug resistance efflux pump, RND family, inner membrane protein EmrB n=2 Tax=Geobacter sulfurreducens RepID=D7AIR5_GEOSK
EmrB/QacA family drug resistance transporter; K03446 MFS transporter, DHA2 family, multidrug resistance protein B Tax=RBG_16_Desulfobacca_60_12_curated
RND family multidrug resistance efflux pump inner membrane protein EmrB
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_11662_12
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10988..12046)
DNA (1059bp) protein (353aa)
hypothetical protein n=1 Tax=Geopsychrobacter electrodiphilus RepID=UPI0003742116
multidrug resistance efflux pump, RND family, membrane fusion protein EmrA; K03543 multidrug resistance protein A Tax=RBG_16_Desulfobacca_60_12_curated
RND family multidrug resistance efflux pump membrane fusion protein EmrA
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_11662_13
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12036..12260)
DNA (225bp) protein (75aa)
Outer membrane efflux protein n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NBX7_DESAR
outer membrane efflux protein Tax=RBG_16_Desulfobacca_60_12_curated
outer membrane efflux protein
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_11662_14
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12257..13372)
DNA (1116bp) protein (372aa)
Outer membrane efflux protein n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NBX7_DESAR
outer membrane efflux protein Tax=RBG_16_Desulfobacca_60_12_curated
outer membrane efflux protein
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_11662_15
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14328..15239
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NC08_DESAR
hypothetical protein Tax=RBG_16_Desulfobacca_60_12_curated
hypothetical protein
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_11662_16
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15544..17103
DNA (1560bp) protein (520aa)
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NC07_DESAR
4Fe-4S ferredoxin Tax=RBG_16_Desulfobacca_60_12_curated
4Fe-4S ferredoxin rbh
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_11662_17
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17150..17431)
DNA (282bp) protein (94aa)
Tax=RBG_16_Desulfobacca_60_12_curated
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_11662_18
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17433..17624
DNA (192bp) protein (64aa)
Tax=RBG_16_Desulfobacca_60_12_curated
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_11662_19
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17713..18210)
DNA (498bp) protein (166aa)
redoxin domain-containing protein; K11065 thiol peroxidase, atypical 2-Cys peroxiredoxin [EC:1.11.1.15] Tax=RBG_16_Desulfobacca_60_12_curated
Probable thiol peroxidase n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LKR9_SYNFM
redoxin domain-containing protein
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_11662_20
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18385..19749)
DNA (1365bp) protein (455aa)
tryptophan synthase subunit beta (EC:4.2.1.20); K06001 tryptophan synthase beta chain [EC:4.2.1.20] Tax=RBG_16_Desulfobacca_60_12_curated
tryptophan synthase subunit beta (EC:4.2.1.20)
Tryptophan synthase beta chain n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NF63_DESAR
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_11662_21
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19958..20362)
DNA (405bp) protein (135aa)
methylmalonyl-CoA mutase domain-containing protein; K01849 methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2] Tax=RBG_16_Desulfobacca_60_12_curated
Methylmalonyl-CoA mutase domain protein n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NG42_DESAR
methylmalonyl-CoA mutase domain-containing protein
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_11662_22
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20492..22168)
DNA (1677bp) protein (559aa)
methylmalonyl-CoA mutase large subunit (EC:5.4.99.2); K01848 methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2] Tax=RBG_16_Desulfobacca_60_12_curated
methylmalonyl-CoA mutase large subunit (EC:5.4.99.2)
Methylmalonyl-CoA mutase, large subunit n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NG41_DESAR
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_11662_23
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22431..24260)
DNA (1830bp) protein (610aa)
Putative cache sensor protein n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NG36_DESAR
cache sensor protein Tax=RBG_16_Desulfobacca_60_12_curated
cache sensor protein
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_11662_24
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24418..24561)
DNA (144bp) protein (48aa)
aspartyl-tRNA synthetase (EC:6.1.1.12); K01876 aspartyl-tRNA synthetase [EC:6.1.1.12] Tax=RBG_16_Desulfobacca_60_12_curated
aspartyl-tRNA synthetase (EC:6.1.1.12)
Aspartate--tRNA ligase n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NG35_DESAR
Suspect SCG annotation. See neighboring gene [RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_11662_25].
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_11662_25
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(24666..26288)
DNA (1623bp) protein (541aa)
aspartyl-tRNA synthetase (EC:6.1.1.12); K01876 aspartyl-tRNA synthetase [EC:6.1.1.12] Tax=RBG_16_Desulfobacca_60_12_curated
aspartyl-tRNA synthetase (EC:6.1.1.12)
Aspartate--tRNA ligase n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NG35_DESAR
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_11662_26
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(26389..27711)
DNA (1323bp) protein (441aa)
histidyl-tRNA synthetase (EC:6.1.1.21); K01892 histidyl-tRNA synthetase [EC:6.1.1.21] Tax=RBG_16_Desulfobacca_60_12_curated
histidyl-tRNA synthetase (EC:6.1.1.21)
Histidine--tRNA ligase n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NG34_DESAR
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_11662_27
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28329..28448
DNA (120bp) protein (40aa)
Tax=RBG_16_Desulfobacca_60_12_curated
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_11662_28
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28451..29848
DNA (1398bp) protein (466aa)
Radical SAM domain protein n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NHG6_DESAR
radical SAM protein; K06871 uncharacterized protein Tax=RBG_16_Desulfobacca_60_12_curated
radical SAM protein
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_11662_29
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29928..31796)
DNA (1869bp) protein (623aa)
Putative uncharacterized protein n=1 Tax=uncultured delta proteobacterium RepID=Q2YZR2_9DELT
PAS/PAC sensor protein Tax=RBG_16_Desulfobacca_60_12_curated
PAS/PAC sensor protein
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_11662_30
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32165..32533
DNA (369bp) protein (123aa)
Tax=RBG_16_Desulfobacca_60_12_curated
Displaying items 1-30 of 33 in total

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