ggKbase home page

RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_5998

Search features with annotation key words

Displaying items 1-30 of 41 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_5998_1
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..624)
DNA (624bp) protein (208aa)
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23); K10563 formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] Tax=RBG_16_Desulfobacca_60_12_curated
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23)
Formamidopyrimidine-DNA glycosylase n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NII2_DESAR
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_5998_2
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(852..1067)
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NEC1_DESAR
hypothetical protein Tax=RBG_16_Desulfobacca_60_12_curated
hypothetical protein
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_5998_3
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1064..1672)
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NEC0_DESAR
hypothetical protein Tax=RBG_16_Desulfobacca_60_12_curated
hypothetical protein
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_5998_4
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2232..3560
DNA (1329bp) protein (443aa)
Sigma54 specific transcriptional regulator, Fis family n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LF40_SYNFM
sigma-54 dependent trancsriptional regulator Tax=RBG_16_Desulfobacca_60_12_curated
sigma-54 dependent trancsriptional regulator
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_5998_5
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3803..4045
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=delta proteobacterium NaphS2 RepID=D8F7Q6_9DELT
hypothetical protein Tax=RBG_16_Desulfobacca_60_12_curated
hypothetical protein
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_5998_6
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4070..4231
DNA (162bp) protein (54aa)
Rubredoxin n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JVZ8_DESAC
rubredoxin-type Fe(Cys)4 protein Tax=RBG_16_Desulfobacca_60_12_curated
rubredoxin-type Fe(Cys)4 protein
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_5998_7
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4344..4841
DNA (498bp) protein (166aa)
Putative uncharacterized protein n=1 Tax=uncultured Desulfobacterium sp. RepID=E1YCZ8_9DELT
rubrerythrin Tax=RBG_16_Desulfobacca_60_12_curated
rubrerythrin
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_5998_8
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4878..5252
DNA (375bp) protein (125aa)
desulfoferrodoxin (EC:1.15.1.1); K05919 superoxide reductase [EC:1.15.1.2] Tax=RBG_16_Desulfobacca_60_12_curated
desulfoferrodoxin (EC:1.15.1.1)
Desulfoferrodoxin n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NDC8_DESAR
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_5998_9
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5362..6693
DNA (1332bp) protein (444aa)
cytochrome bd ubiquinol oxidase subunit I; K00425 cytochrome d ubiquinol oxidase subunit I [EC:1.10.3.-] Tax=RBG_16_Desulfobacca_60_12_curated
Cytochrome bd ubiquinol oxidase, subunit I n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LF37_SYNFM
cytochrome bd ubiquinol oxidase subunit I
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_5998_10
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6698..7723
DNA (1026bp) protein (342aa)
cytochrome d oxidase cyd, subunit II (EC:1.10.3.10) Tax=RBG_16_Desulfobacca_60_12_curated
cytochrome d oxidase cyd, subunit II (EC:1.10.3.10)
Cytochrome d oxidase cyd, subunit II n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C5A9_DESTA
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_5998_11
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8067..9059
DNA (993bp) protein (331aa)
Pyridine nucleotide-disulfide oxidoreductase, FAD/NAD(P)-binding domain containing protein n=1 Tax=Desulfovibrio alkalitolerans DSM 16529 RepID=S7T2D5_9DELT
FAD-dependent pyridine nucleotide-disulfide oxidoreductase domain-containing protein Tax=RBG_16_Desulfobacca_60_12_curated
FAD-dependent pyridine nucleotide-disulfide oxidoreductase domain-containing protein
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_5998_12
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9063..9338
DNA (276bp) protein (92aa)
Putative FAD-dependent pyridine nucleotide-disulfide oxidoreductase domain-containing protein n=1 Tax=Desulfovibrio gigas DSM 1382 = ATCC 19364 RepID=T2GAL0_DESGI
putative FAD-dependent pyridine nucleotide-disulfide oxidoreductase domain-containing protein Tax=RBG_16_Desulfobacca_60_12_curated
putative FAD-dependent pyridine nucleotide-disulfide oxidoreductase domain-containing protein
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_5998_13
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9335..10033
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Desulfovibrio alkalitolerans DSM 16529 RepID=S7T2M0_9DELT
hypothetical protein Tax=RBG_16_Desulfobacca_60_12_curated
hypothetical protein
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_5998_14
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10437..11726
DNA (1290bp) protein (430aa)
phenylacetate--CoA ligase (EC:6.2.1.30); K01912 phenylacetate-CoA ligase [EC:6.2.1.30] Tax=RBG_16_Desulfobacca_60_12_curated
phenylacetate--CoA ligase (EC:6.2.1.30)
Phenylacetate--CoA ligase n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NHD2_DESAR
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_5998_trna_1
unknown

Not on your lists

11839..11921
DNA (83bp)
transferRNA
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_5998_trna_2
unknown

Not on your lists

12011..12099
DNA (89bp)
transferRNA
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_5998_15
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12295..13770
DNA (1476bp) protein (492aa)
Major facilitator superfamily MFS_1 n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NE69_DESAR
major facilitator superfamily protein Tax=RBG_16_Desulfobacca_60_12_curated
major facilitator superfamily protein
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_5998_16
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14063..14266
DNA (204bp) protein (68aa)
Tax=RBG_16_Desulfobacca_60_12_curated
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_5998_17
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14527..14826
DNA (300bp) protein (100aa)
hypothetical protein Tax=RBG_16_Desulfobacca_60_12_curated
Putative uncharacterized protein id=4237391 bin=GWF2_OP3_43_52 species=Herpetosiphon aurantiacus genus=Herpetosiphon taxon_order=Herpetosiphonales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
hypothetical protein
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_5998_18
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14828..15931
DNA (1104bp) protein (368aa)
Putative Fe-S oxidoreductase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LKP2_CHLTF
putative Fe-S oxidoreductase Tax=RBG_16_Desulfobacca_60_12_curated
putative Fe-S oxidoreductase
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_5998_19
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15928..16083
DNA (156bp) protein (52aa)
Tax=RBG_16_Desulfobacca_60_12_curated
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_5998_20
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16199..17110
DNA (912bp) protein (304aa)
Putative uncharacterized protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LKP1_CHLTF
hypothetical protein Tax=RBG_16_Desulfobacca_60_12_curated
hypothetical protein
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_5998_21
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17107..17583
DNA (477bp) protein (159aa)
hypothetical protein; K13280 signal peptidase, endoplasmic reticulum-type [EC:3.4.-.-] Tax=RBG_16_Desulfobacca_60_12_curated
Uncharacterized protein n=1 Tax=Paenibacillus mucilaginosus K02 RepID=I0BV15_9BACL
hypothetical protein
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_5998_trna_4
unknown

Not on your lists

comp(18230..18313)
DNA (84bp)
transferRNA
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_5998_22
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18422..19348
DNA (927bp) protein (309aa)
riboflavin biosynthesis protein RibF (EC:2.7.1.26 2.7.7.2); K11753 riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] Tax=RBG_16_Desulfobacca_60_12_curated
riboflavin biosynthesis protein RibF (EC:2.7.1.26 2.7.7.2)
Riboflavin biosynthesis protein RibF n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NFI9_DESAR
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_5998_23
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19398..19667
DNA (270bp) protein (90aa)
Tax=RBG_16_Desulfobacca_60_12_curated
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_5998_24
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19839..20156)
DNA (318bp) protein (106aa)
Tax=RBG_16_Desulfobacca_60_12_curated
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_5998_trna_3
unknown

Not on your lists

20414..20486
DNA (73bp)
transferRNA
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_5998_25
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20740..20934
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q0W2_9BACT
hypothetical protein Tax=RBG_16_Desulfobacca_60_12_curated
hypothetical protein
RBG_16_Deltaproteobacteria_Desulfobacca_60_12_RBG_16_scaffold_5998_26
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20954..21145
DNA (192bp) protein (64aa)
Uncharacterized protein n=3 Tax=Arthrospira RepID=K1VWJ1_ARTPT
hypothetical protein Tax=RBG_16_Desulfobacca_60_12_curated
hypothetical protein
Displaying items 1-30 of 41 in total

View Taxonomy