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RBG_16_DPX1_47_11_RBG_16_scaffold_1082

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Displaying items 1-30 of 39 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_16_DPX1_47_11_RBG_16_scaffold_1082_1
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

348..1634
DNA (1287bp) protein (429aa)
amino acid/amide ABC transporter substrate-binding protein, HAAT family Tax=RBG_16_Deltaproteobacteria_47_11_curated
Amino acid/amide ABC transporter substrate-binding protein, HAAT family id=3239112 bin=GWC2_Syntrophus__56_31 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
amino acid/amide ABC transporter substrate-binding protein, HAAT family
RBG_16_DPX1_47_11_RBG_16_scaffold_1082_2
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1731..2615
DNA (885bp) protein (295aa)
amino acid/amide ABC transporter membrane protein 1, HAAT family Tax=RBG_16_Deltaproteobacteria_47_11_curated
Amino acid/amide ABC transporter membrane protein 1, HAAT family id=3238917 bin=GWC2_Syntrophus__56_31 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
amino acid/amide ABC transporter membrane protein 1, HAAT family
RBG_16_DPX1_47_11_RBG_16_scaffold_1082_3
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2657..3067
DNA (411bp) protein (137aa)
amino acid/amide ABC transporter membrane protein 2, HAAT family Tax=RBG_16_Deltaproteobacteria_47_11_curated
Amino acid/amide ABC transporter membrane protein 2, HAAT family id=3238915 bin=GWC2_Syntrophus__56_31 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
amino acid/amide ABC transporter membrane protein 2, HAAT family
RBG_16_DPX1_47_11_RBG_16_scaffold_1082_4
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3634..4401
DNA (768bp) protein (256aa)
amino acid/amide ABC transporter ATP-binding protein 1, HAAT family Tax=RBG_16_Deltaproteobacteria_47_11_curated
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family id=3238913 bin=GWC2_Syntrophus__56_31 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
amino acid/amide ABC transporter ATP-binding protein 1, HAAT family
RBG_16_DPX1_47_11_RBG_16_scaffold_1082_5
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4398..5129
DNA (732bp) protein (244aa)
amino acid/amide ABC transporter ATP-binding protein 2, HAAT family Tax=RBG_16_Deltaproteobacteria_47_11_curated
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family id=4763498 bin=GWC2_Proteo_65_14_Ab886 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
amino acid/amide ABC transporter ATP-binding protein 2, HAAT family
RBG_16_DPX1_47_11_RBG_16_scaffold_1082_6
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5212..7533
DNA (2322bp) protein (774aa)
Spermine synthase; K00797 spermidine synthase [EC:2.5.1.16] Tax=RBG_16_Deltaproteobacteria_47_11_curated
Spermine synthase n=2 Tax=delta proteobacterium MLMS-1 RepID=Q1NSD7_9DELT
Spermine synthase
RBG_16_DPX1_47_11_RBG_16_scaffold_1082_7
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7798..9102
DNA (1305bp) protein (435aa)
Major facilitator superfamily MFS_1 n=1 Tax=Desulfococcus multivorans DSM 2059 RepID=S7TUS1_DESML
hypothetical protein Tax=RBG_16_Deltaproteobacteria_47_11_curated
MFS transporter
RBG_16_DPX1_47_11_RBG_16_scaffold_1082_8
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9621..10913)
DNA (1293bp) protein (431aa)
Dihydroorotate dehydrogenase family protein n=1 Tax=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) RepID=A3DL41_STAMF
dihydroorotate dehydrogenase family protein Tax=RBG_16_Deltaproteobacteria_47_11_curated
dihydroorotate dehydrogenase family protein
RBG_16_DPX1_47_11_RBG_16_scaffold_1082_9
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10988..11428)
DNA (441bp) protein (147aa)
Putative uncharacterized protein Tax=RBG_16_Deltaproteobacteria_47_11_curated
Putative uncharacterized protein id=3931941 bin=GWC2_Clostridiales_40_7 species=Blautia hydrogenotrophica genus=Blautia taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Clostridiales_40_7 organism_group=Firmicute
RBG_16_DPX1_47_11_RBG_16_scaffold_1082_10
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11437..12231)
DNA (795bp) protein (265aa)
short-chain dehydrogenase/reductase SDR; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] Tax=RBG_16_Deltaproteobacteria_47_11_curated
Putative short chain dehydrogenase n=1 Tax=uncultured marine microorganism HF4000_APKG10H11 RepID=B3TC36_9ZZZZ
short-chain dehydrogenase/reductase SDR
RBG_16_DPX1_47_11_RBG_16_scaffold_1082_11
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12378..13139)
DNA (762bp) protein (254aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HSG6_9FIRM
dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein Tax=RBG_16_Deltaproteobacteria_47_11_curated
dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein
RBG_16_DPX1_47_11_RBG_16_scaffold_1082_12
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13171..13983)
DNA (813bp) protein (271aa)
Hydantoin racemase-like protein n=1 Tax=Burkholderia sp. TJI49 RepID=F0G8C8_9BURK
Hydantoin racemase-like protein Tax=RBG_16_Deltaproteobacteria_47_11_curated
asp/Glu/Hydantoin racemase family protein
RBG_16_DPX1_47_11_RBG_16_scaffold_1082_13
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14038..15066)
DNA (1029bp) protein (343aa)
Putative uncharacterized protein n=1 Tax=Synergistes sp. 3_1_syn1 RepID=G9PTU8_9BACT
hypothetical protein Tax=RBG_16_Deltaproteobacteria_47_11_curated
hypothetical protein
RBG_16_DPX1_47_11_RBG_16_scaffold_1082_14
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15154..15858)
DNA (705bp) protein (235aa)
ABC transporter related protein n=1 Tax=Syntrophothermus lipocalidus (strain DSM 12680 / TGB-C1) RepID=D7CKB0_SYNLT
ABC transporter; K01996 branched-chain amino acid transport system ATP-binding protein Tax=RBG_16_Deltaproteobacteria_47_11_curated
ABC transporter
RBG_16_DPX1_47_11_RBG_16_scaffold_1082_15
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15860..16657)
DNA (798bp) protein (266aa)
Sugar ABC transporter ATPase n=1 Tax=Bacillus bataviensis LMG 21833 RepID=K6D0A0_9BACI
ABC transporter-like protein; K01995 branched-chain amino acid transport system ATP-binding protein Tax=RBG_16_Deltaproteobacteria_47_11_curated
ABC transporter-like protein
RBG_16_DPX1_47_11_RBG_16_scaffold_1082_16
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16680..17645)
DNA (966bp) protein (322aa)
Inner-membrane translocator n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AGT9_AZOBR
inner-membrane translocator Tax=RBG_16_Deltaproteobacteria_47_11_curated
inner-membrane translocator
RBG_16_DPX1_47_11_RBG_16_scaffold_1082_17
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17673..18545)
DNA (873bp) protein (291aa)
Amino acid/amide ABC transporter membrane protein 1, HAAT family n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11L43_MESSB
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein Tax=RBG_16_Deltaproteobacteria_47_11_curated
inner-membrane translocator
RBG_16_DPX1_47_11_RBG_16_scaffold_1082_18
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18791..19999)
DNA (1209bp) protein (403aa)
Putative branched-chain amino acid-binding protein n=1 Tax=Roseovarius nubinhibens ISM RepID=A3SK32_9RHOB
extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein Tax=RBG_16_Deltaproteobacteria_47_11_curated
extracellular ligand-binding receptor
RBG_16_DPX1_47_11_RBG_16_scaffold_1082_19
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20045..20830)
DNA (786bp) protein (262aa)
gluconate 5-dehydrogenase; K00046 gluconate 5-dehydrogenase [EC:1.1.1.69] Tax=RBG_16_Deltaproteobacteria_47_11_curated
hypothetical protein n=1 Tax=candidate division OP9 bacterium OP9-cSCG RepID=UPI00037918EA
gluconate 5-dehydrogenase
RBG_16_DPX1_47_11_RBG_16_scaffold_1082_20
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20949..22259)
DNA (1311bp) protein (437aa)
4-aminobutyrate aminotransferase; K07250 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase [EC:2.6.1.19 2.6.1.22] Tax=RBG_16_Deltaproteobacteria_47_11_curated
4-aminobutyrate aminotransferase apoenzyme n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GDL1_GEOUR
4-aminobutyrate aminotransferase
RBG_16_DPX1_47_11_RBG_16_scaffold_1082_21
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22476..22757)
DNA (282bp) protein (94aa)
Tax=RBG_16_Deltaproteobacteria_47_11_curated
RBG_16_DPX1_47_11_RBG_16_scaffold_1082_22
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23065..24825)
DNA (1761bp) protein (587aa)
Putative sigma54 specific transcriptional regulator n=1 Tax=Acetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288) RepID=D9QS50_ACEAZ
sigma-54 specific transcriptional regulator Tax=RBG_16_Deltaproteobacteria_47_11_curated
sigma-54 specific transcriptional regulator
RBG_16_DPX1_47_11_RBG_16_scaffold_1082_23
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25367..26527
DNA (1161bp) protein (387aa)
Saccharopine dehydrogenase n=1 Tax=Bacillus bataviensis LMG 21833 RepID=K6C928_9BACI
saccharopine dehydrogenase Tax=RBG_16_Deltaproteobacteria_47_11_curated
saccharopine dehydrogenase-like oxidoreductase
RBG_16_DPX1_47_11_RBG_16_scaffold_1082_24
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26536..28557
DNA (2022bp) protein (674aa)
5-oxoprolinase (ATP-hydrolyzing) (EC:3.5.2.9); K01473 N-methylhydantoinase A [EC:3.5.2.14] Tax=RBG_16_Deltaproteobacteria_47_11_curated
5-oxoprolinase (ATP-hydrolyzing) (EC:3.5.2.9)
hydantoinase n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B786F3
RBG_16_DPX1_47_11_RBG_16_scaffold_1082_25
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28558..30249
DNA (1692bp) protein (564aa)
5-oxoprolinase; K01474 N-methylhydantoinase B [EC:3.5.2.14] Tax=RBG_16_Deltaproteobacteria_47_11_curated
methylhydantoinase n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B41173
5-oxoprolinase
RBG_16_DPX1_47_11_RBG_16_scaffold_1082_26
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31156..32424
DNA (1269bp) protein (423aa)
Extracellular ligand-binding receptor n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IB70_XANP2
extracellular ligand-binding receptor Tax=RBG_16_Deltaproteobacteria_47_11_curated
extracellular ligand-binding receptor
RBG_16_DPX1_47_11_RBG_16_scaffold_1082_27
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32561..33517
DNA (957bp) protein (319aa)
Inner-membrane translocator n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IB71_XANP2
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein Tax=RBG_16_Deltaproteobacteria_47_11_curated
inner-membrane translocator
RBG_16_DPX1_47_11_RBG_16_scaffold_1082_28
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33534..34532
DNA (999bp) protein (333aa)
Uncharacterized protein n=1 Tax=Ralstonia pickettii DTP0602 RepID=U3QKH9_RALPI
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein Tax=RBG_16_Deltaproteobacteria_47_11_curated
hypothetical protein
RBG_16_DPX1_47_11_RBG_16_scaffold_1082_29
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34543..35283
DNA (741bp) protein (247aa)
High-affinity branched-chain amino acid transport ATP-binding protein BraF n=1 Tax=Desulfovibrio piezophilus (strain DSM 21447 / JCM 15486 / C1TLV30) RepID=M1WSH6_DESPC
braF; High-affinity branched-chain amino acid transport ATP-binding protein BraF Tax=RBG_16_Deltaproteobacteria_47_11_curated
braF; High-affinity branched-chain amino acid transport ATP-binding protein BraF
RBG_16_DPX1_47_11_RBG_16_scaffold_1082_30
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35255..35965
DNA (711bp) protein (237aa)
monosaccharide-transporting ATPase (EC:3.6.3.17); K01996 branched-chain amino acid transport system ATP-binding protein Tax=RBG_16_Deltaproteobacteria_47_11_curated
monosaccharide-transporting ATPase (EC:3.6.3.17)
Putative high-affinity branched-chain amino acid transporter ATP-binding protein livF n=1 Tax=uncultured archaeon RepID=D1JBT2_9ARCH
Displaying items 1-30 of 39 in total

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